RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 SLC25A32Q9H2D1 315 aa13.32□□□□□ -0.28
SNX4-204ENST00000473417 ALMS1Q8TCU4 4167 aa13.31□□□□□ -0.28
SNX4-204ENST00000473417 H3BRN7 92 aa13.31□□□□□ -0.28
SNX4-204ENST00000473417 RPL35AP18077 110 aaKnown RBP13.31□□□□□ -0.28
SNX4-204ENST00000473417 SHANK2-AS3Q9BTD1 123 aa13.31□□□□□ -0.28
SNX4-204ENST00000473417 HSPB11Q9Y547 144 aa13.31□□□□□ -0.28
SNX4-204ENST00000473417 HYDINQ4G0P3 5121 aa13.31□□□□□ -0.28
SNX4-204ENST00000473417 COX7A2P2O60397 106 aa13.3□□□□□ -0.28
SNX4-204ENST00000473417 GIPP09681 153 aaPredicted RBP13.3□□□□□ -0.28
SNX4-204ENST00000473417 APOC4P55056 127 aa13.3□□□□□ -0.28
SNX4-204ENST00000473417 OPCMLQ14982 345 aa13.3□□□□□ -0.28
SNX4-204ENST00000473417 Q5BKY6 102 aa13.3□□□□□ -0.28
SNX4-204ENST00000473417 PXDC1Q5TGL8 231 aa13.3□□□□□ -0.28
SNX4-204ENST00000473417 Q6ZRG5 221 aa13.3□□□□□ -0.28
SNX4-204ENST00000473417 SMIM3Q9BZL3 60 aa13.3□□□□□ -0.28
SNX4-204ENST00000473417 TP53TG1Q9Y2A0 90 aa13.3□□□□□ -0.28
SNX4-204ENST00000473417 GALR1P47211 349 aa13.29□□□□□ -0.28
SNX4-204ENST00000473417 RPL29P47914 159 aaKnown RBP13.29□□□□□ -0.28
SNX4-204ENST00000473417 PRR20EP86478 221 aa13.29□□□□□ -0.28
SNX4-204ENST00000473417 PRR20CP86479 221 aa13.29□□□□□ -0.28
SNX4-204ENST00000473417 PRR20DP86480 221 aa13.29□□□□□ -0.28
SNX4-204ENST00000473417 PRR20BP86481 221 aa13.29□□□□□ -0.28
SNX4-204ENST00000473417 PRR20AP86496 221 aa13.29□□□□□ -0.28
SNX4-204ENST00000473417 PSMG4Q5JS54 123 aa13.29□□□□□ -0.28
SNX4-204ENST00000473417 Q6ZWC4 215 aa13.29□□□□□ -0.28
SNX4-204ENST00000473417 TMEM37Q8WXS4 190 aa13.29□□□□□ -0.28
SNX4-204ENST00000473417 RSG1Q9BU20 258 aa13.29□□□□□ -0.28
SNX4-204ENST00000473417 SLC39A9Q9NUM3 307 aa13.29□□□□□ -0.28
SNX4-204ENST00000473417 KIR2DL5BA0A0G2JN68 375 aa13.28□□□□□ -0.28
SNX4-204ENST00000473417 KIR2DL5BA0A0G2JPC4 375 aa13.28□□□□□ -0.28
SNX4-204ENST00000473417 UBE2CO00762 179 aa13.28□□□□□ -0.28
SNX4-204ENST00000473417 MPDU1O75352 247 aa13.28□□□□□ -0.28
SNX4-204ENST00000473417 JTBO76095 146 aa13.28□□□□□ -0.28
SNX4-204ENST00000473417 B2MP61769 119 aa13.28□□□□□ -0.28
SNX4-204ENST00000473417 LINC00305Q7Z4B0 112 aa13.28□□□□□ -0.28
SNX4-204ENST00000473417 S100A7AQ86SG5 101 aa13.28□□□□□ -0.28
SNX4-204ENST00000473417 KIR2DL5AQ8N109 375 aa13.28□□□□□ -0.28
SNX4-204ENST00000473417 KIR2DL5BQ8NHK3 375 aa13.28□□□□□ -0.28
SNX4-204ENST00000473417 CHAC2Q8WUX2 184 aa13.28□□□□□ -0.28
SNX4-204ENST00000473417 ATP5SQ99766 215 aa13.28□□□□□ -0.28
SNX4-204ENST00000473417 NPCDR1Q9BY65 106 aa13.28□□□□□ -0.28
SNX4-204ENST00000473417 PXMP4Q9Y6I8 212 aa13.28□□□□□ -0.28
SNX4-204ENST00000473417 ELOA3CA0A087WX78 387 aaPredicted RBP13.27□□□□□ -0.29
SNX4-204ENST00000473417 KNCNA6PVL3 124 aa13.27□□□□□ -0.29
SNX4-204ENST00000473417 SNRPD3P62318 126 aaKnown RBP13.27□□□□□ -0.29
SNX4-204ENST00000473417 FGL1Q08830 312 aa13.27□□□□□ -0.29
SNX4-204ENST00000473417 DEFB135Q30KP9 77 aa13.27□□□□□ -0.29
SNX4-204ENST00000473417 C10orf113Q5VZT2 155 aa13.27□□□□□ -0.29
SNX4-204ENST00000473417 ASB13Q8WXK3 278 aa13.27□□□□□ -0.29
SNX4-204ENST00000473417 GPR82Q96P67 336 aa13.27□□□□□ -0.29
SNX4-204ENST00000473417 WDR61Q9GZS3 305 aaKnown RBP13.27□□□□□ -0.29
SNX4-204ENST00000473417 DNAJC4Q9NNZ3 241 aa13.27□□□□□ -0.29
SNX4-204ENST00000473417 EPPK1P58107 5090 aaKnown RBP13.26□□□□□ -0.29
SNX4-204ENST00000473417 SOCS3O14543 225 aa13.26□□□□□ -0.29
SNX4-204ENST00000473417 SPRY2O43597 315 aa13.26□□□□□ -0.29
SNX4-204ENST00000473417 RPL7P18124 248 aaKnown RBP13.26□□□□□ -0.29
SNX4-204ENST00000473417 MORN5Q5VZ52 161 aa13.26□□□□□ -0.29
SNX4-204ENST00000473417 C17orf77Q96MU5 243 aa13.26□□□□□ -0.29
SNX4-204ENST00000473417 LINC00052Q96N35 136 aa13.26□□□□□ -0.29
SNX4-204ENST00000473417 WFDC1Q9HC57 220 aa13.26□□□□□ -0.29
SNX4-204ENST00000473417 ATF4P18848 351 aaPredicted RBP13.25□□□□□ -0.29
SNX4-204ENST00000473417 ID1P41134 155 aa13.25□□□□□ -0.29
SNX4-204ENST00000473417 ACTL10Q5JWF8 245 aa13.25□□□□□ -0.29
SNX4-204ENST00000473417 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.25□□□□□ -0.29
SNX4-204ENST00000473417 STHQ8IWL8 128 aa13.25□□□□□ -0.29
SNX4-204ENST00000473417 ZNF709Q8N972 641 aa13.25□□□□□ -0.29
SNX4-204ENST00000473417 OR1L4Q8NGR5 311 aa13.25□□□□□ -0.29
SNX4-204ENST00000473417 OR2T35Q8NGX2 323 aa13.25□□□□□ -0.29
SNX4-204ENST00000473417 SEPSECSQ9HD40 501 aaKnown RBP13.25□□□□□ -0.29
SNX4-204ENST00000473417 A0A0J9YWU9 116 aa13.24□□□□□ -0.29
SNX4-204ENST00000473417 IFNA5P01569 189 aa13.24□□□□□ -0.29
SNX4-204ENST00000473417 MEOX2P50222 304 aa13.24□□□□□ -0.29
SNX4-204ENST00000473417 SCGB1C1Q8TD33 95 aa13.24□□□□□ -0.29
SNX4-204ENST00000473417 RNF183Q96D59 192 aa13.24□□□□□ -0.29
SNX4-204ENST00000473417 C16orf92Q96LL3 132 aa13.24□□□□□ -0.29
SNX4-204ENST00000473417 PFDN5Q99471 154 aa13.24□□□□□ -0.29
SNX4-204ENST00000473417 RNF24Q9Y225 148 aa13.24□□□□□ -0.29
SNX4-204ENST00000473417 FXYD6-FXYD2A0A087WZ82 144 aa13.23□□□□□ -0.29
SNX4-204ENST00000473417 TRAV5A0A0B4J249 113 aa13.23□□□□□ -0.29
SNX4-204ENST00000473417 SNRPCP09234 159 aaKnown RBP13.23□□□□□ -0.29
SNX4-204ENST00000473417 PSMB3P49720 205 aa13.23□□□□□ -0.29
SNX4-204ENST00000473417 GCSAMLQ5JQS6 135 aa13.23□□□□□ -0.29
SNX4-204ENST00000473417 CSTL1Q9H114 145 aa13.23□□□□□ -0.29
SNX4-204ENST00000473417 C17orf112F2Z3M2 114 aa13.22□□□□□ -0.29
SNX4-204ENST00000473417 ISLRO14498 428 aa13.22□□□□□ -0.29
SNX4-204ENST00000473417 DEFB1P60022 68 aa13.22□□□□□ -0.29
SNX4-204ENST00000473417 SAMD13Q5VXD3 122 aa13.22□□□□□ -0.29
SNX4-204ENST00000473417 IGFL4Q6B9Z1 124 aa13.22□□□□□ -0.29
SNX4-204ENST00000473417 GATAD1Q8WUU5 269 aa13.22□□□□□ -0.29
SNX4-204ENST00000473417 AQP10Q96PS8 301 aa13.22□□□□□ -0.29
SNX4-204ENST00000473417 KCNIP2Q9NS61 270 aa13.22□□□□□ -0.29
SNX4-204ENST00000473417 MRPS12O15235 138 aaKnown RBP13.21□□□□□ -0.29
SNX4-204ENST00000473417 TRPT1Q86TN4 253 aaKnown RBP13.21□□□□□ -0.29
SNX4-204ENST00000473417 BPIFA4PQ86YQ2 179 aa13.21□□□□□ -0.29
SNX4-204ENST00000473417 C20orf173Q96LM9 149 aa13.21□□□□□ -0.29
SNX4-204ENST00000473417 A0A087X0K7 114 aa13.2□□□□□ -0.3
SNX4-204ENST00000473417 TRAV8-2A0A0B4J237 113 aa13.2□□□□□ -0.3
SNX4-204ENST00000473417 G3V3Q6 166 aa13.2□□□□□ -0.3
SNX4-204ENST00000473417 SMLR1H3BR10 107 aa13.2□□□□□ -0.3
SNX4-204ENST00000473417 INO80EQ8NBZ0 244 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms