RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 CITED4Q96RK1 184 aa10.54□□□□□ -0.72
BRCA1-211ENST00000472490 PFDN5Q99471 154 aa10.54□□□□□ -0.72
BRCA1-211ENST00000472490 H3BRN7 92 aa10.53□□□□□ -0.72
BRCA1-211ENST00000472490 ZNF688P0C7X2 276 aa10.53□□□□□ -0.72
BRCA1-211ENST00000472490 B2MP61769 119 aa10.53□□□□□ -0.72
BRCA1-211ENST00000472490 CLINT1Q14677 625 aa10.53□□□□□ -0.72
BRCA1-211ENST00000472490 C10orf113Q5VZT2 155 aa10.53□□□□□ -0.72
BRCA1-211ENST00000472490 LINC00305Q7Z4B0 112 aa10.53□□□□□ -0.72
BRCA1-211ENST00000472490 STHQ8IWL8 128 aa10.53□□□□□ -0.72
BRCA1-211ENST00000472490 ATP5SQ99766 215 aa10.53□□□□□ -0.72
BRCA1-211ENST00000472490 HSPB11Q9Y547 144 aa10.53□□□□□ -0.72
BRCA1-211ENST00000472490 DNAH3Q8TD57 4116 aa10.52□□□□□ -0.72
BRCA1-211ENST00000472490 C17orf112F2Z3M2 114 aa10.52□□□□□ -0.73
BRCA1-211ENST00000472490 IFNA5P01569 189 aa10.52□□□□□ -0.73
BRCA1-211ENST00000472490 PSMB3P49720 205 aa10.52□□□□□ -0.73
BRCA1-211ENST00000472490 PSMG4Q5JS54 123 aa10.52□□□□□ -0.73
BRCA1-211ENST00000472490 LEMD1Q68G75 181 aa10.52□□□□□ -0.73
BRCA1-211ENST00000472490 FAM24BQ8N5W8 94 aa10.52□□□□□ -0.73
BRCA1-211ENST00000472490 RCHY1Q96PM5 261 aa10.52□□□□□ -0.73
BRCA1-211ENST00000472490 UHRF2Q96PU4 802 aa10.52□□□□□ -0.73
BRCA1-211ENST00000472490 SCRT1Q9BWW7 348 aa10.52□□□□□ -0.73
BRCA1-211ENST00000472490 NPCDR1Q9BY65 106 aa10.52□□□□□ -0.73
BRCA1-211ENST00000472490 SLC25A32Q9H2D1 315 aa10.52□□□□□ -0.73
BRCA1-211ENST00000472490 DNAJC4Q9NNZ3 241 aa10.52□□□□□ -0.73
BRCA1-211ENST00000472490 SLC39A9Q9NUM3 307 aa10.52□□□□□ -0.73
BRCA1-211ENST00000472490 PXMP4Q9Y6I8 212 aa10.52□□□□□ -0.73
BRCA1-211ENST00000472490 ISLRO14498 428 aa10.51□□□□□ -0.73
BRCA1-211ENST00000472490 ATF4P18848 351 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-211ENST00000472490 OPCMLQ14982 345 aa10.51□□□□□ -0.73
BRCA1-211ENST00000472490 MIC13Q5XKP0 118 aa10.51□□□□□ -0.73
BRCA1-211ENST00000472490 Q6ZWC4 215 aa10.51□□□□□ -0.73
BRCA1-211ENST00000472490 SCGB1C1Q8TD33 95 aa10.51□□□□□ -0.73
BRCA1-211ENST00000472490 GATAD1Q8WUU5 269 aa10.51□□□□□ -0.73
BRCA1-211ENST00000472490 RSG1Q9BU20 258 aa10.51□□□□□ -0.73
BRCA1-211ENST00000472490 WDR61Q9GZS3 305 aaKnown RBP10.51□□□□□ -0.73
BRCA1-211ENST00000472490 RPL35AP18077 110 aaKnown RBP10.5□□□□□ -0.73
BRCA1-211ENST00000472490 PATE2Q6UY27 113 aa10.5□□□□□ -0.73
BRCA1-211ENST00000472490 BPIFA4PQ86YQ2 179 aa10.5□□□□□ -0.73
BRCA1-211ENST00000472490 INO80EQ8NBZ0 244 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-211ENST00000472490 TMEM37Q8WXS4 190 aa10.5□□□□□ -0.73
BRCA1-211ENST00000472490 C16orf92Q96LL3 132 aa10.5□□□□□ -0.73
BRCA1-211ENST00000472490 CSTL1Q9H114 145 aa10.5□□□□□ -0.73
BRCA1-211ENST00000472490 PRKDCP78527 4128 aaKnown RBP10.5□□□□□ -0.73
BRCA1-211ENST00000472490 NUTF2P61970 127 aaKnown RBP10.49□□□□□ -0.73
BRCA1-211ENST00000472490 ZNF266Q14584 549 aa10.49□□□□□ -0.73
BRCA1-211ENST00000472490 ZNF124Q15973 351 aa10.49□□□□□ -0.73
BRCA1-211ENST00000472490 ACTL10Q5JWF8 245 aa10.49□□□□□ -0.73
BRCA1-211ENST00000472490 OR2T35Q8NGX2 323 aa10.49□□□□□ -0.73
BRCA1-211ENST00000472490 LRRC20Q8TCA0 184 aa10.49□□□□□ -0.73
BRCA1-211ENST00000472490 LINC00052Q96N35 136 aa10.49□□□□□ -0.73
BRCA1-211ENST00000472490 WWC2-AS2Q96NR7 200 aa10.49□□□□□ -0.73
BRCA1-211ENST00000472490 AQP10Q96PS8 301 aa10.49□□□□□ -0.73
BRCA1-211ENST00000472490 PARD6GQ9BYG4 376 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-211ENST00000472490 TP53TG1Q9Y2A0 90 aa10.49□□□□□ -0.73
BRCA1-211ENST00000472490 SOCS3O14543 225 aa10.48□□□□□ -0.73
BRCA1-211ENST00000472490 SPP1P10451 314 aa10.48□□□□□ -0.73
BRCA1-211ENST00000472490 TMEM41BQ5BJD5 291 aa10.48□□□□□ -0.73
BRCA1-211ENST00000472490 SPATA31B1PQ5VZV4 182 aa10.48□□□□□ -0.73
BRCA1-211ENST00000472490 MORN3Q6PF18 240 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-211ENST00000472490 SMIM3Q9BZL3 60 aa10.48□□□□□ -0.73
BRCA1-211ENST00000472490 RPRMQ9NS64 109 aa10.48□□□□□ -0.73
BRCA1-211ENST00000472490 A0A087X0K7 114 aa10.47□□□□□ -0.73
BRCA1-211ENST00000472490 CXCL2P19875 107 aa10.47□□□□□ -0.73
BRCA1-211ENST00000472490 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.47□□□□□ -0.73
BRCA1-211ENST00000472490 FXYD6-FXYD2A0A087WZ82 144 aa10.46□□□□□ -0.73
BRCA1-211ENST00000472490 KNCNA6PVL3 124 aa10.46□□□□□ -0.73
BRCA1-211ENST00000472490 SPRY2O43597 315 aa10.46□□□□□ -0.73
BRCA1-211ENST00000472490 SMCPP49901 116 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-211ENST00000472490 GUK1Q16774 197 aa10.46□□□□□ -0.73
BRCA1-211ENST00000472490 EBLN2Q6P2I7 272 aa10.46□□□□□ -0.73
BRCA1-211ENST00000472490 LCN15Q6UWW0 184 aa10.46□□□□□ -0.73
BRCA1-211ENST00000472490 FOXI2Q6ZQN5 318 aa10.46□□□□□ -0.73
BRCA1-211ENST00000472490 TRPT1Q86TN4 253 aaKnown RBP10.46□□□□□ -0.73
BRCA1-211ENST00000472490 CLEC5AQ9NY25 188 aa10.46□□□□□ -0.73
BRCA1-211ENST00000472490 CA1P00915 261 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-211ENST00000472490 HLA-DRB4P13762 266 aa10.45□□□□□ -0.74
BRCA1-211ENST00000472490 DEFB135Q30KP9 77 aa10.45□□□□□ -0.74
BRCA1-211ENST00000472490 FAM78BQ5VT40 261 aa10.45□□□□□ -0.74
BRCA1-211ENST00000472490 SLC50A1Q9BRV3 221 aa10.45□□□□□ -0.74
BRCA1-211ENST00000472490 MRPL32Q9BYC8 188 aaKnown RBP10.45□□□□□ -0.74
BRCA1-211ENST00000472490 HRH4Q9H3N8 390 aa10.45□□□□□ -0.74
BRCA1-211ENST00000472490 SAV1Q9H4B6 383 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-211ENST00000472490 HLA-DRB4X5D2U9 266 aa10.45□□□□□ -0.74
BRCA1-211ENST00000472490 H3BMM0 161 aa10.44□□□□□ -0.74
BRCA1-211ENST00000472490 MRPS12O15235 138 aaKnown RBP10.44□□□□□ -0.74
BRCA1-211ENST00000472490 Q5BKY6 102 aa10.44□□□□□ -0.74
BRCA1-211ENST00000472490 RNF183Q96D59 192 aa10.44□□□□□ -0.74
BRCA1-211ENST00000472490 OVOL2Q9BRP0 275 aa10.44□□□□□ -0.74
BRCA1-211ENST00000472490 C1QTNF4Q9BXJ3 329 aa10.44□□□□□ -0.74
BRCA1-211ENST00000472490 RETNQ9HD89 108 aa10.44□□□□□ -0.74
BRCA1-211ENST00000472490 TNFSF18Q9UNG2 199 aa10.44□□□□□ -0.74
BRCA1-211ENST00000472490 FFAR4Q5NUL3 377 aa10.43□□□□□ -0.74
BRCA1-211ENST00000472490 MORN5Q5VZ52 161 aa10.43□□□□□ -0.74
BRCA1-211ENST00000472490 CLUHP3Q96NS8 147 aa10.43□□□□□ -0.74
BRCA1-211ENST00000472490 TMEM14CQ9P0S9 112 aa10.43□□□□□ -0.74
BRCA1-211ENST00000472490 TIMM9Q9Y5J7 89 aa10.43□□□□□ -0.74
BRCA1-211ENST00000472490 BORCS7-ASMTA0A0B4J1R7 106 aa10.42□□□□□ -0.74
BRCA1-211ENST00000472490 ZNF253O75346 499 aa10.42□□□□□ -0.74
BRCA1-211ENST00000472490 DUSP14O95147 198 aaKnown RBP10.42□□□□□ -0.74
BRCA1-211ENST00000472490 IGLC2P0DOY2 106 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms