RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 ZNF705DP0CH99 300 aaPredicted RBP11.02□□□□□ -0.65
COL1A1-203ENST00000471344 ZNF705BP0CI00 300 aaPredicted RBP11.02□□□□□ -0.65
COL1A1-203ENST00000471344 PRB4P10163 310 aaPredicted RBP11.02□□□□□ -0.65
COL1A1-203ENST00000471344 ID1P41134 155 aa11.02□□□□□ -0.65
COL1A1-203ENST00000471344 FAM78BQ5VT40 261 aa11.02□□□□□ -0.65
COL1A1-203ENST00000471344 BPIFCQ8NFQ6 507 aa11.02□□□□□ -0.65
COL1A1-203ENST00000471344 RSG1Q9BU20 258 aa11.02□□□□□ -0.65
COL1A1-203ENST00000471344 SLC45A2Q9UMX9 530 aa11.02□□□□□ -0.65
COL1A1-203ENST00000471344 FAT2Q9NYQ8 4349 aa11.02□□□□□ -0.65
COL1A1-203ENST00000471344 IGHV4-4A0A075B6R2 117 aa11.01□□□□□ -0.65
COL1A1-203ENST00000471344 TRAV10A0A0B4J240 114 aa11.01□□□□□ -0.65
COL1A1-203ENST00000471344 A0A0J9YX75 114 aa11.01□□□□□ -0.65
COL1A1-203ENST00000471344 METTL15P1P0C7V9 234 aa11.01□□□□□ -0.65
COL1A1-203ENST00000471344 EMP1P54849 157 aa11.01□□□□□ -0.65
COL1A1-203ENST00000471344 CYP2G1PQ6ZSU1 146 aa11.01□□□□□ -0.65
COL1A1-203ENST00000471344 TMEM144Q7Z5S9 345 aa11.01□□□□□ -0.65
COL1A1-203ENST00000471344 ZBTB8BQ8NAP8 495 aaPredicted RBP11.01□□□□□ -0.65
COL1A1-203ENST00000471344 C16orf92Q96LL3 132 aa11.01□□□□□ -0.65
COL1A1-203ENST00000471344 RCL1Q9Y2P8 373 aaKnown RBP11.01□□□□□ -0.65
COL1A1-203ENST00000471344 H3BRN7 92 aa11□□□□□ -0.65
COL1A1-203ENST00000471344 GALR1P47211 349 aa11□□□□□ -0.65
COL1A1-203ENST00000471344 IAH1Q2TAA2 248 aaPredicted RBP11□□□□□ -0.65
COL1A1-203ENST00000471344 SAMD13Q5VXD3 122 aa11□□□□□ -0.65
COL1A1-203ENST00000471344 C12orf45Q8N5I9 185 aaPredicted RBP11□□□□□ -0.65
COL1A1-203ENST00000471344 RNF182Q8N6D2 247 aa11□□□□□ -0.65
COL1A1-203ENST00000471344 SMIM8Q96KF7 97 aa11□□□□□ -0.65
COL1A1-203ENST00000471344 UHRF2Q96PU4 802 aa11□□□□□ -0.65
COL1A1-203ENST00000471344 TMEM147Q9BVK8 224 aa11□□□□□ -0.65
COL1A1-203ENST00000471344 DEFB131BA0A096LNP1 70 aa10.99□□□□□ -0.65
COL1A1-203ENST00000471344 TRAV8-2A0A0B4J237 113 aa10.99□□□□□ -0.65
COL1A1-203ENST00000471344 S100A7P31151 101 aa10.99□□□□□ -0.65
COL1A1-203ENST00000471344 ARL16Q0P5N6 197 aa10.99□□□□□ -0.65
COL1A1-203ENST00000471344 AMTNQ6UX39 209 aa10.99□□□□□ -0.65
COL1A1-203ENST00000471344 TMEM14EPQ6UXP3 125 aa10.99□□□□□ -0.65
COL1A1-203ENST00000471344 C1orf158Q8N1D5 194 aa10.99□□□□□ -0.65
COL1A1-203ENST00000471344 CLUHP3Q96NS8 147 aa10.99□□□□□ -0.65
COL1A1-203ENST00000471344 SLC25A39Q9BZJ4 359 aaPredicted RBP10.99□□□□□ -0.65
COL1A1-203ENST00000471344 PLA2G2EQ9NZK7 142 aa10.99□□□□□ -0.65
COL1A1-203ENST00000471344 IL5P05113 134 aa10.98□□□□□ -0.65
COL1A1-203ENST00000471344 LINC00869P0C866 280 aa10.98□□□□□ -0.65
COL1A1-203ENST00000471344 MEOX2P50222 304 aa10.98□□□□□ -0.65
COL1A1-203ENST00000471344 PSG9Q00887 426 aa10.98□□□□□ -0.65
COL1A1-203ENST00000471344 SLC38A11Q08AI6 406 aa10.98□□□□□ -0.65
COL1A1-203ENST00000471344 SPATA31B1PQ5VZV4 182 aa10.98□□□□□ -0.65
COL1A1-203ENST00000471344 EBLN2Q6P2I7 272 aa10.98□□□□□ -0.65
COL1A1-203ENST00000471344 NEU1Q99519 415 aa10.98□□□□□ -0.65
COL1A1-203ENST00000471344 MARVELD1Q9BSK0 173 aa10.98□□□□□ -0.65
COL1A1-203ENST00000471344 SHANK2-AS3Q9BTD1 123 aa10.98□□□□□ -0.65
COL1A1-203ENST00000471344 RPRMQ9NS64 109 aa10.98□□□□□ -0.65
COL1A1-203ENST00000471344 GSKIPQ9P0R6 139 aa10.98□□□□□ -0.65
COL1A1-203ENST00000471344 DNAH17Q9UFH2 4485 aa10.97□□□□□ -0.65
COL1A1-203ENST00000471344 A8MTW9 85 aa10.97□□□□□ -0.65
COL1A1-203ENST00000471344 FAM25EA8MYX2 175 aa10.97□□□□□ -0.65
COL1A1-203ENST00000471344 FNDC10F2Z333 226 aa10.97□□□□□ -0.65
COL1A1-203ENST00000471344 INMT-MINDY4F8WBC2 141 aa10.97□□□□□ -0.65
COL1A1-203ENST00000471344 SIX6O95475 246 aa10.97□□□□□ -0.65
COL1A1-203ENST00000471344 MBPP02686 304 aaPredicted RBP10.97□□□□□ -0.65
COL1A1-203ENST00000471344 PRM2P04554 102 aa10.97□□□□□ -0.65
COL1A1-203ENST00000471344 TCTAP57738 103 aa10.97□□□□□ -0.65
COL1A1-203ENST00000471344 TAS2R30P59541 319 aa10.97□□□□□ -0.65
COL1A1-203ENST00000471344 DLK1P80370 383 aa10.97□□□□□ -0.65
COL1A1-203ENST00000471344 FGL1Q08830 312 aa10.97□□□□□ -0.65
COL1A1-203ENST00000471344 PATE2Q6UY27 113 aa10.97□□□□□ -0.65
COL1A1-203ENST00000471344 GPR82Q96P67 336 aa10.97□□□□□ -0.65
COL1A1-203ENST00000471344 HIGD1AQ9Y241 93 aa10.97□□□□□ -0.65
COL1A1-203ENST00000471344 C7orf66A4D0T2 115 aa10.96□□□□□ -0.65
COL1A1-203ENST00000471344 M0R2Z0 102 aa10.96□□□□□ -0.65
COL1A1-203ENST00000471344 AMBPP02760 352 aa10.96□□□□□ -0.65
COL1A1-203ENST00000471344 OR5G3P0C626 314 aa10.96□□□□□ -0.65
COL1A1-203ENST00000471344 CNN1P51911 297 aaKnown RBP10.96□□□□□ -0.65
COL1A1-203ENST00000471344 DEFA1P59665 94 aa10.96□□□□□ -0.65
COL1A1-203ENST00000471344 DEFA3P59666 94 aa10.96□□□□□ -0.65
COL1A1-203ENST00000471344 RNF126Q9BV68 326 aa10.96□□□□□ -0.65
COL1A1-203ENST00000471344 RFNGQ9Y644 331 aa10.96□□□□□ -0.65
COL1A1-203ENST00000471344 TSC22D2O75157 780 aa10.95□□□□□ -0.66
COL1A1-203ENST00000471344 HYPMO75409 117 aa10.95□□□□□ -0.66
COL1A1-203ENST00000471344 SNRPCP09234 159 aaKnown RBP10.95□□□□□ -0.66
COL1A1-203ENST00000471344 PLP1P60201 277 aa10.95□□□□□ -0.66
COL1A1-203ENST00000471344 SELENOTP62341 195 aa10.95□□□□□ -0.66
COL1A1-203ENST00000471344 IL15RAQ13261 267 aa10.95□□□□□ -0.66
COL1A1-203ENST00000471344 SPINK13Q1W4C9 94 aa10.95□□□□□ -0.66
COL1A1-203ENST00000471344 FAM222AQ5U5X8 452 aa10.95□□□□□ -0.66
COL1A1-203ENST00000471344 OR11H7Q8NGC8 314 aa10.95□□□□□ -0.66
COL1A1-203ENST00000471344 ARL6Q9H0F7 186 aa10.95□□□□□ -0.66
COL1A1-203ENST00000471344 C11orf1Q9H5F2 150 aa10.95□□□□□ -0.66
COL1A1-203ENST00000471344 DKK2Q9UBU2 259 aa10.95□□□□□ -0.66
COL1A1-203ENST00000471344 LOC102723971A0A1B0GUV8 181 aa10.94□□□□□ -0.66
COL1A1-203ENST00000471344 C5orf51A6NDU8 294 aa10.94□□□□□ -0.66
COL1A1-203ENST00000471344 SMIM9A6NGZ8 99 aa10.94□□□□□ -0.66
COL1A1-203ENST00000471344 K7EPK0 472 aa10.94□□□□□ -0.66
COL1A1-203ENST00000471344 CRXO43186 299 aaPredicted RBP10.94□□□□□ -0.66
COL1A1-203ENST00000471344 SPART-AS1P0CW21 52 aa10.94□□□□□ -0.66
COL1A1-203ENST00000471344 RAP2BP61225 183 aa10.94□□□□□ -0.66
COL1A1-203ENST00000471344 BAP18Q8IXM2 172 aa10.94□□□□□ -0.66
COL1A1-203ENST00000471344 OR10P1Q8NGE3 313 aa10.94□□□□□ -0.66
COL1A1-203ENST00000471344 NPVFQ9HCQ7 196 aa10.94□□□□□ -0.66
COL1A1-203ENST00000471344 MGAT4CQ9UBM8 478 aa10.94□□□□□ -0.66
COL1A1-203ENST00000471344 GOLT1BQ9Y3E0 138 aa10.94□□□□□ -0.66
COL1A1-203ENST00000471344 LSM5Q9Y4Y9 91 aaKnown RBP10.94□□□□□ -0.66
COL1A1-203ENST00000471344 PKHD1P08F94 4074 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms