RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 NRN1Q9NPD7 142 aa11.16□□□□□ -0.62
CDC42SE1-203ENST00000470278 DNAH7Q8WXX0 4024 aa11.15□□□□□ -0.62
CDC42SE1-203ENST00000470278 A8MZ25 164 aa11.15□□□□□ -0.62
CDC42SE1-203ENST00000470278 CD7P09564 240 aa11.15□□□□□ -0.62
CDC42SE1-203ENST00000470278 RPL7P18124 248 aaKnown RBP11.15□□□□□ -0.62
CDC42SE1-203ENST00000470278 RPL11P62913 178 aaKnown RBP11.15□□□□□ -0.62
CDC42SE1-203ENST00000470278 KCNRGQ8N5I3 272 aa11.15□□□□□ -0.62
CDC42SE1-203ENST00000470278 C19orf73Q9NVV2 129 aa11.15□□□□□ -0.62
CDC42SE1-203ENST00000470278 IGKV3-7A0A075B6H7 116 aa11.14□□□□□ -0.63
CDC42SE1-203ENST00000470278 K7EQG2 157 aa11.14□□□□□ -0.63
CDC42SE1-203ENST00000470278 C1QBP02746 253 aa11.14□□□□□ -0.63
CDC42SE1-203ENST00000470278 GALR1P47211 349 aa11.14□□□□□ -0.63
CDC42SE1-203ENST00000470278 ODF3L2Q3SX64 289 aa11.14□□□□□ -0.63
CDC42SE1-203ENST00000470278 SAMD13Q5VXD3 122 aa11.14□□□□□ -0.63
CDC42SE1-203ENST00000470278 STXBP6Q8NFX7 210 aa11.14□□□□□ -0.63
CDC42SE1-203ENST00000470278 PSMG3Q9BT73 122 aaPredicted RBP11.14□□□□□ -0.63
CDC42SE1-203ENST00000470278 SLC25A22Q9H936 323 aa11.14□□□□□ -0.63
CDC42SE1-203ENST00000470278 SEPSECSQ9HD40 501 aaKnown RBP11.14□□□□□ -0.63
CDC42SE1-203ENST00000470278 SMAD5-AS1Q9Y6J3 95 aa11.14□□□□□ -0.63
CDC42SE1-203ENST00000470278 BORCS7-ASMTA0A0B4J1R7 106 aa11.13□□□□□ -0.63
CDC42SE1-203ENST00000470278 A0A0D9SG52 128 aa11.13□□□□□ -0.63
CDC42SE1-203ENST00000470278 DNASE2O00115 360 aaPredicted RBP11.13□□□□□ -0.63
CDC42SE1-203ENST00000470278 JTBO76095 146 aa11.13□□□□□ -0.63
CDC42SE1-203ENST00000470278 MEOX2P50222 304 aa11.13□□□□□ -0.63
CDC42SE1-203ENST00000470278 CMC4P56277 68 aaPredicted RBP11.13□□□□□ -0.63
CDC42SE1-203ENST00000470278 LEMD1Q68G75 181 aa11.13□□□□□ -0.63
CDC42SE1-203ENST00000470278 GBGT1Q8N5D6 347 aa11.13□□□□□ -0.63
CDC42SE1-203ENST00000470278 OR2G3Q8NGZ4 309 aa11.13□□□□□ -0.63
CDC42SE1-203ENST00000470278 HUWE1Q7Z6Z7 4374 aaKnown RBP11.13□□□□□ -0.63
CDC42SE1-203ENST00000470278 RYR2Q92736 4967 aa11.12□□□□□ -0.63
CDC42SE1-203ENST00000470278 A0A087X0K7 114 aa11.12□□□□□ -0.63
CDC42SE1-203ENST00000470278 MRPS12O15235 138 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-203ENST00000470278 IGHV4-30-4P0DP06 118 aa11.12□□□□□ -0.63
CDC42SE1-203ENST00000470278 TFPI2P48307 235 aa11.12□□□□□ -0.63
CDC42SE1-203ENST00000470278 GCSAMLQ5JQS6 135 aa11.12□□□□□ -0.63
CDC42SE1-203ENST00000470278 RPL7L1Q6DKI1 246 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-203ENST00000470278 GNPNAT1Q96EK6 184 aaPredicted RBP11.12□□□□□ -0.63
CDC42SE1-203ENST00000470278 MRPL32Q9BYC8 188 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-203ENST00000470278 MAP6D1Q9H9H5 199 aa11.12□□□□□ -0.63
CDC42SE1-203ENST00000470278 OR11H12B2RN74 326 aa11.11□□□□□ -0.63
CDC42SE1-203ENST00000470278 SOCS3O14543 225 aa11.11□□□□□ -0.63
CDC42SE1-203ENST00000470278 CXCL2P19875 107 aa11.11□□□□□ -0.63
CDC42SE1-203ENST00000470278 ATP6V0CP27449 155 aa11.11□□□□□ -0.63
CDC42SE1-203ENST00000470278 FFAR4Q5NUL3 377 aa11.11□□□□□ -0.63
CDC42SE1-203ENST00000470278 MORN5Q5VZ52 161 aa11.11□□□□□ -0.63
CDC42SE1-203ENST00000470278 BPIFA4PQ86YQ2 179 aa11.11□□□□□ -0.63
CDC42SE1-203ENST00000470278 HSD17B11Q8NBQ5 300 aa11.11□□□□□ -0.63
CDC42SE1-203ENST00000470278 HYLS1Q96M11 299 aa11.11□□□□□ -0.63
CDC42SE1-203ENST00000470278 C17orf77Q96MU5 243 aa11.11□□□□□ -0.63
CDC42SE1-203ENST00000470278 ARPC5LQ9BPX5 153 aa11.11□□□□□ -0.63
CDC42SE1-203ENST00000470278 CYTL1Q9NRR1 136 aa11.11□□□□□ -0.63
CDC42SE1-203ENST00000470278 ISLRO14498 428 aa11.1□□□□□ -0.63
CDC42SE1-203ENST00000470278 BCL2L11O43521 198 aa11.1□□□□□ -0.63
CDC42SE1-203ENST00000470278 PSMB3P49720 205 aa11.1□□□□□ -0.63
CDC42SE1-203ENST00000470278 SNRPD3P62318 126 aaKnown RBP11.1□□□□□ -0.63
CDC42SE1-203ENST00000470278 SERF2P84101 59 aa11.1□□□□□ -0.63
CDC42SE1-203ENST00000470278 FAM78BQ5VT40 261 aa11.1□□□□□ -0.63
CDC42SE1-203ENST00000470278 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.1□□□□□ -0.63
CDC42SE1-203ENST00000470278 WFDC3Q8IUB2 231 aa11.1□□□□□ -0.63
CDC42SE1-203ENST00000470278 FAM24BQ8N5W8 94 aa11.1□□□□□ -0.63
CDC42SE1-203ENST00000470278 WFDC10AQ9H1F0 79 aa11.1□□□□□ -0.63
CDC42SE1-203ENST00000470278 TMEM14CQ9P0S9 112 aa11.1□□□□□ -0.63
CDC42SE1-203ENST00000470278 SACSQ9NZJ4 4579 aa11.1□□□□□ -0.63
CDC42SE1-203ENST00000470278 IGLC2P0DOY2 106 aa11.09□□□□□ -0.63
CDC42SE1-203ENST00000470278 ATF4P18848 351 aaPredicted RBP11.09□□□□□ -0.63
CDC42SE1-203ENST00000470278 M6PRP20645 277 aa11.09□□□□□ -0.63
CDC42SE1-203ENST00000470278 ACOT6Q3I5F7 207 aaPredicted RBP11.09□□□□□ -0.63
CDC42SE1-203ENST00000470278 DEFB125Q8N687 156 aa11.09□□□□□ -0.63
CDC42SE1-203ENST00000470278 SH3BGRL3Q9H299 93 aa11.09□□□□□ -0.63
CDC42SE1-203ENST00000470278 UBQLN2Q9UHD9 624 aa11.09□□□□□ -0.63
CDC42SE1-203ENST00000470278 FUT9Q9Y231 359 aa11.09□□□□□ -0.63
CDC42SE1-203ENST00000470278 KANTRA0A1W2PQU2 76 aa11.08□□□□□ -0.64
CDC42SE1-203ENST00000470278 MBP02144 154 aa11.08□□□□□ -0.64
CDC42SE1-203ENST00000470278 ZNF688P0C7X2 276 aa11.08□□□□□ -0.64
CDC42SE1-203ENST00000470278 RHOBP62745 196 aa11.08□□□□□ -0.64
CDC42SE1-203ENST00000470278 CD300CQ08708 224 aa11.08□□□□□ -0.64
CDC42SE1-203ENST00000470278 FAM167A-AS1Q96KT0 104 aa11.08□□□□□ -0.64
CDC42SE1-203ENST00000470278 SLC25A2Q9BXI2 301 aa11.08□□□□□ -0.64
CDC42SE1-203ENST00000470278 HRH4Q9H3N8 390 aa11.08□□□□□ -0.64
CDC42SE1-203ENST00000470278 RFNGQ9Y644 331 aa11.08□□□□□ -0.64
CDC42SE1-203ENST00000470278 TRAV5A0A0B4J249 113 aa11.07□□□□□ -0.64
CDC42SE1-203ENST00000470278 FRMD6-AS1P0C7T7 363 aa11.07□□□□□ -0.64
CDC42SE1-203ENST00000470278 ID1P41134 155 aa11.07□□□□□ -0.64
CDC42SE1-203ENST00000470278 GUK1Q16774 197 aa11.07□□□□□ -0.64
CDC42SE1-203ENST00000470278 ZFP69Q49AA0 526 aa11.07□□□□□ -0.64
CDC42SE1-203ENST00000470278 DEFB121Q5J5C9 76 aa11.07□□□□□ -0.64
CDC42SE1-203ENST00000470278 SPATA31B1PQ5VZV4 182 aa11.07□□□□□ -0.64
CDC42SE1-203ENST00000470278 LCN15Q6UWW0 184 aa11.07□□□□□ -0.64
CDC42SE1-203ENST00000470278 LINC00322Q6ZN03 302 aaPredicted RBP11.07□□□□□ -0.64
CDC42SE1-203ENST00000470278 TMUB2Q71RG4 321 aa11.07□□□□□ -0.64
CDC42SE1-203ENST00000470278 MIR17HGQ75NE6 70 aa11.07□□□□□ -0.64
CDC42SE1-203ENST00000470278 CITED4Q96RK1 184 aa11.07□□□□□ -0.64
CDC42SE1-203ENST00000470278 B9D2Q9BPU9 175 aa11.07□□□□□ -0.64
CDC42SE1-203ENST00000470278 SRD5A3Q9H8P0 318 aa11.07□□□□□ -0.64
CDC42SE1-203ENST00000470278 TENM2Q9NT68 2774 aa11.07□□□□□ -0.64
CDC42SE1-203ENST00000470278 PFDN1O60925 122 aa11.06□□□□□ -0.64
CDC42SE1-203ENST00000470278 ZNF253O75346 499 aa11.06□□□□□ -0.64
CDC42SE1-203ENST00000470278 SPP1P10451 314 aa11.06□□□□□ -0.64
CDC42SE1-203ENST00000470278 TAS2R45P59539 299 aa11.06□□□□□ -0.64
CDC42SE1-203ENST00000470278 DEFB131AP59861 70 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms