RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 C20orf24Q9BUV8 137 aa9.92□□□□□ -0.82
COL4A1-202ENST00000467182 EIF5A2Q9GZV4 153 aaKnown RBP9.92□□□□□ -0.82
COL4A1-202ENST00000467182 ZNF586Q9NXT0 402 aa9.92□□□□□ -0.82
COL4A1-202ENST00000467182 VAX2Q9UIW0 290 aa9.92□□□□□ -0.82
COL4A1-202ENST00000467182 SMAD5-AS1Q9Y6J3 95 aa9.92□□□□□ -0.82
COL4A1-202ENST00000467182 K7EMT4 169 aa9.91□□□□□ -0.82
COL4A1-202ENST00000467182 LGALS9O00182 355 aa9.91□□□□□ -0.82
COL4A1-202ENST00000467182 ADCYAP1P18509 176 aa9.91□□□□□ -0.82
COL4A1-202ENST00000467182 NPPCP23582 126 aa9.91□□□□□ -0.82
COL4A1-202ENST00000467182 HOXD3P31249 432 aaPredicted RBP9.91□□□□□ -0.82
COL4A1-202ENST00000467182 MYCNOSP40205 109 aa9.91□□□□□ -0.82
COL4A1-202ENST00000467182 ATP5G3P48201 142 aa9.91□□□□□ -0.82
COL4A1-202ENST00000467182 UBE2G2P60604 165 aa9.91□□□□□ -0.82
COL4A1-202ENST00000467182 KLF5Q13887 457 aaPredicted RBP9.91□□□□□ -0.82
COL4A1-202ENST00000467182 PEA15Q15121 130 aa9.91□□□□□ -0.82
COL4A1-202ENST00000467182 RPEL1Q2QD12 228 aa9.91□□□□□ -0.82
COL4A1-202ENST00000467182 C8orf86Q6ZUL3 223 aa9.91□□□□□ -0.82
COL4A1-202ENST00000467182 S100A7AQ86SG5 101 aa9.91□□□□□ -0.82
COL4A1-202ENST00000467182 KLHL30-AS1Q8NEE0 82 aa9.91□□□□□ -0.82
COL4A1-202ENST00000467182 LINC00052Q96N35 136 aa9.91□□□□□ -0.82
COL4A1-202ENST00000467182 SMDT1Q9H4I9 107 aa9.91□□□□□ -0.82
COL4A1-202ENST00000467182 TREM1Q9NP99 234 aa9.91□□□□□ -0.82
COL4A1-202ENST00000467182 TSSC4Q9Y5U2 329 aaPredicted RBP9.91□□□□□ -0.82
COL4A1-202ENST00000467182 ARL2-SNX15V9GYD0 113 aa9.91□□□□□ -0.82
COL4A1-202ENST00000467182 IGHV3-49A0A0A0MS15 119 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 A0A1B0GUS0 222 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 TMEM218A2RU14 115 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 A8MWP6 167 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 GGTLC3B5MD39 225 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 LINC01619G3V211 115 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 NDUFS6O75380 124 aaKnown RBP9.9□□□□□ -0.82
COL4A1-202ENST00000467182 NDUFB4O95168 129 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 SNRPCP09234 159 aaKnown RBP9.9□□□□□ -0.82
COL4A1-202ENST00000467182 NBEAP1P0C6P0 100 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 HIST1H1EP10412 219 aaKnown RBP9.9□□□□□ -0.82
COL4A1-202ENST00000467182 TAGLN2P37802 199 aaKnown RBP9.9□□□□□ -0.82
COL4A1-202ENST00000467182 SLURP1P55000 103 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 MEF2BQ02080 365 aaPredicted RBP9.9□□□□□ -0.82
COL4A1-202ENST00000467182 FHL3Q13643 280 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 FAM106AQ4KMX7 169 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 TM4SF20Q53R12 229 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 KHDC1LQ5JSQ8 128 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 C1orf194Q5T5A4 169 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 C16orf54Q6UWD8 224 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 BPIFA4PQ86YQ2 179 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 C1QL4Q86Z23 238 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 CCDC28AQ8IWP9 274 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 OR11H1Q8NG94 326 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 OR1N2Q8NGR9 330 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 GLMPQ8WWB7 406 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 RAX2Q96IS3 184 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 DUX3Q96PT4 197 aa9.9□□□□□ -0.82
COL4A1-202ENST00000467182 IGHV3OR16-13A0A075B7E8 117 aa9.89□□□□□ -0.83
COL4A1-202ENST00000467182 IGHV3-74A0A0B4J1X5 117 aa9.89□□□□□ -0.83
COL4A1-202ENST00000467182 IGHV3-66A0A0C4DH42 116 aa9.89□□□□□ -0.83
COL4A1-202ENST00000467182 IGHV7-4-1A0A0J9YVY3 117 aa9.89□□□□□ -0.83
COL4A1-202ENST00000467182 A0A1W2PRE2 83 aa9.89□□□□□ -0.83
COL4A1-202ENST00000467182 ZNF320A2RRD8 509 aa9.89□□□□□ -0.83
COL4A1-202ENST00000467182 TMEM213A2RRL7 107 aa9.89□□□□□ -0.83
COL4A1-202ENST00000467182 H3BTX0 84 aa9.89□□□□□ -0.83
COL4A1-202ENST00000467182 C10orf91Q5T1B1 145 aa9.89□□□□□ -0.83
COL4A1-202ENST00000467182 DAZ1Q9NQZ3 744 aaKnown RBP9.89□□□□□ -0.83
COL4A1-202ENST00000467182 C2CD3Q4AC94 2353 aa9.89□□□□□ -0.83
COL4A1-202ENST00000467182 TRBV19A0A075B6N1 114 aa9.88□□□□□ -0.83
COL4A1-202ENST00000467182 A0A087X0K7 114 aa9.88□□□□□ -0.83
COL4A1-202ENST00000467182 A0A1W2PRX2 142 aa9.88□□□□□ -0.83
COL4A1-202ENST00000467182 C11orf94C9JXX5 98 aa9.88□□□□□ -0.83
COL4A1-202ENST00000467182 SFTA3P0C7M3 94 aa9.88□□□□□ -0.83
COL4A1-202ENST00000467182 RPL7P18124 248 aaKnown RBP9.88□□□□□ -0.83
COL4A1-202ENST00000467182 ZP3P21754 424 aa9.88□□□□□ -0.83
COL4A1-202ENST00000467182 S100A7P31151 101 aa9.88□□□□□ -0.83
COL4A1-202ENST00000467182 SYNJ2BPP57105 145 aa9.88□□□□□ -0.83
COL4A1-202ENST00000467182 PRIMA1Q86XR5 153 aa9.88□□□□□ -0.83
COL4A1-202ENST00000467182 OR8I2Q8N0Y5 310 aa9.88□□□□□ -0.83
COL4A1-202ENST00000467182 OR4F4Q96R69 305 aa9.88□□□□□ -0.83
COL4A1-202ENST00000467182 SLC35B3Q9H1N7 401 aa9.88□□□□□ -0.83
COL4A1-202ENST00000467182 SMPXQ9UHP9 88 aa9.88□□□□□ -0.83
COL4A1-202ENST00000467182 RNF24Q9Y225 148 aa9.88□□□□□ -0.83
COL4A1-202ENST00000467182 UFC1Q9Y3C8 167 aa9.88□□□□□ -0.83
COL4A1-202ENST00000467182 SLC17A3O00476 420 aa9.87□□□□□ -0.83
COL4A1-202ENST00000467182 CHEK1O14757 476 aa9.87□□□□□ -0.83
COL4A1-202ENST00000467182 FOXL1Q12952 345 aa9.87□□□□□ -0.83
COL4A1-202ENST00000467182 CST9LP1Q5W188 147 aa9.87□□□□□ -0.83
COL4A1-202ENST00000467182 FAM90A2PQ658T7 463 aa9.87□□□□□ -0.83
COL4A1-202ENST00000467182 ADAMTSL5Q6ZMM2 481 aa9.87□□□□□ -0.83
COL4A1-202ENST00000467182 CYB561D1Q8N8Q1 229 aa9.87□□□□□ -0.83
COL4A1-202ENST00000467182 OR4F17Q8NGA8 305 aa9.87□□□□□ -0.83
COL4A1-202ENST00000467182 BLNKQ8WV28 456 aa9.87□□□□□ -0.83
COL4A1-202ENST00000467182 DLX4Q92988 240 aaPredicted RBP9.87□□□□□ -0.83
COL4A1-202ENST00000467182 GPR82Q96P67 336 aa9.87□□□□□ -0.83
COL4A1-202ENST00000467182 TXNDC17Q9BRA2 123 aa9.87□□□□□ -0.83
COL4A1-202ENST00000467182 ELOVL1Q9BW60 279 aa9.87□□□□□ -0.83
COL4A1-202ENST00000467182 KRBOX1C9JBD0 128 aa9.86□□□□□ -0.83
COL4A1-202ENST00000467182 S100A1P23297 94 aa9.86□□□□□ -0.83
COL4A1-202ENST00000467182 KRTAP24-1Q3LI83 254 aa9.86□□□□□ -0.83
COL4A1-202ENST00000467182 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.86□□□□□ -0.83
COL4A1-202ENST00000467182 SIGLEC15Q6ZMC9 328 aa9.86□□□□□ -0.83
COL4A1-202ENST00000467182 DPF1Q92782 380 aa9.86□□□□□ -0.83
COL4A1-202ENST00000467182 C11orf52Q96A22 123 aa9.86□□□□□ -0.83
COL4A1-202ENST00000467182 NARS2Q96I59 477 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms