RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 FCN2Q15485 313 aa6.97□□□□□ -1.29
SDCCAG3-208ENST00000466579 LRRC37A5PQ49AS3 106 aa6.97□□□□□ -1.29
SDCCAG3-208ENST00000466579 S100A7AQ86SG5 101 aa6.97□□□□□ -1.29
SDCCAG3-208ENST00000466579 TRPT1Q86TN4 253 aaKnown RBP6.97□□□□□ -1.29
SDCCAG3-208ENST00000466579 OR8I2Q8N0Y5 310 aa6.97□□□□□ -1.29
SDCCAG3-208ENST00000466579 OR5C1Q8NGR4 320 aa6.97□□□□□ -1.29
SDCCAG3-208ENST00000466579 TMEM37Q8WXS4 190 aa6.97□□□□□ -1.29
SDCCAG3-208ENST00000466579 PPP1R14BQ96C90 147 aa6.97□□□□□ -1.29
SDCCAG3-208ENST00000466579 OVOL2Q9BRP0 275 aa6.97□□□□□ -1.29
SDCCAG3-208ENST00000466579 SCRT1Q9BWW7 348 aa6.97□□□□□ -1.29
SDCCAG3-208ENST00000466579 ARL6Q9H0F7 186 aa6.97□□□□□ -1.29
SDCCAG3-208ENST00000466579 MED28Q9H204 178 aa6.97□□□□□ -1.29
SDCCAG3-208ENST00000466579 RNF24Q9Y225 148 aa6.97□□□□□ -1.29
SDCCAG3-208ENST00000466579 ELOA3CA0A087WX78 387 aaPredicted RBP6.96□□□□□ -1.3
SDCCAG3-208ENST00000466579 A0A087X0K7 114 aa6.96□□□□□ -1.3
SDCCAG3-208ENST00000466579 ISLRO14498 428 aa6.96□□□□□ -1.3
SDCCAG3-208ENST00000466579 RPL7P18124 248 aaKnown RBP6.96□□□□□ -1.3
SDCCAG3-208ENST00000466579 SNRPD3P62318 126 aaKnown RBP6.96□□□□□ -1.3
SDCCAG3-208ENST00000466579 LEMD1Q68G75 181 aa6.96□□□□□ -1.3
SDCCAG3-208ENST00000466579 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.96□□□□□ -1.3
SDCCAG3-208ENST00000466579 CLUHP3Q96NS8 147 aa6.96□□□□□ -1.3
SDCCAG3-208ENST00000466579 CSTL1Q9H114 145 aa6.96□□□□□ -1.3
SDCCAG3-208ENST00000466579 ARV1Q9H2C2 271 aa6.96□□□□□ -1.3
SDCCAG3-208ENST00000466579 RETNQ9HD89 108 aa6.96□□□□□ -1.3
SDCCAG3-208ENST00000466579 MBD2Q9UBB5 411 aa6.96□□□□□ -1.3
SDCCAG3-208ENST00000466579 HSPB11Q9Y547 144 aa6.96□□□□□ -1.3
SDCCAG3-208ENST00000466579 UBE2L5PA0A1B0GUS4 154 aa6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 GIG44P09565 113 aaPredicted RBP6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 GIPP09681 153 aaPredicted RBP6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 OR5G3P0C626 314 aa6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 RPL35AP18077 110 aaKnown RBP6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 FGF7P21781 194 aa6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 RPL12P30050 165 aaKnown RBP6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 ID1P41134 155 aa6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 PSMG4Q5JS54 123 aa6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 MIC13Q5XKP0 118 aa6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 RNF183Q96D59 192 aa6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 UHRF2Q96PU4 802 aa6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 RSG1Q9BU20 258 aa6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 NPCDR1Q9BY65 106 aa6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 PARD6GQ9BYG4 376 aaPredicted RBP6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 WDR61Q9GZS3 305 aaKnown RBP6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 SLC25A22Q9H936 323 aa6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 DNAJC4Q9NNZ3 241 aa6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 SLC39A9Q9NUM3 307 aa6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 DOK5Q9P104 306 aa6.95□□□□□ -1.3
SDCCAG3-208ENST00000466579 KNCNA6PVL3 124 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 A8MTW9 85 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 H3BMM0 161 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 SPP1P10451 314 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 HLA-DRB4P13762 266 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 B2MP61769 119 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 TMEM41BQ5BJD5 291 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 C10orf113Q5VZT2 155 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 SPATA31B1PQ5VZV4 182 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 MORN3Q6PF18 240 aaPredicted RBP6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 Q6ZRG5 221 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 LINC00305Q7Z4B0 112 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 STHQ8IWL8 128 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 OR1L4Q8NGR5 311 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 GATAD1Q8WUU5 269 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 PFDN5Q99471 154 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 ATP5SQ99766 215 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 PXMP4Q9Y6I8 212 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 HLA-DRB4X5D2U9 266 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 STARD9Q9P2P6 4700 aa6.94□□□□□ -1.3
SDCCAG3-208ENST00000466579 CSMD3Q7Z407 3707 aa6.93□□□□□ -1.3
SDCCAG3-208ENST00000466579 TRAV8-2A0A0B4J237 113 aa6.93□□□□□ -1.3
SDCCAG3-208ENST00000466579 SPRY2O43597 315 aa6.93□□□□□ -1.3
SDCCAG3-208ENST00000466579 COX7A2P2O60397 106 aa6.93□□□□□ -1.3
SDCCAG3-208ENST00000466579 CXCL2P19875 107 aa6.93□□□□□ -1.3
SDCCAG3-208ENST00000466579 FGL1Q08830 312 aa6.93□□□□□ -1.3
SDCCAG3-208ENST00000466579 CLINT1Q14677 625 aa6.93□□□□□ -1.3
SDCCAG3-208ENST00000466579 DEFB135Q30KP9 77 aa6.93□□□□□ -1.3
SDCCAG3-208ENST00000466579 ACTL10Q5JWF8 245 aa6.93□□□□□ -1.3
SDCCAG3-208ENST00000466579 MORN5Q5VZ52 161 aa6.93□□□□□ -1.3
SDCCAG3-208ENST00000466579 FOXI2Q6ZQN5 318 aa6.93□□□□□ -1.3
SDCCAG3-208ENST00000466579 THAP6Q8TBB0 222 aa6.93□□□□□ -1.3
SDCCAG3-208ENST00000466579 C20orf173Q96LM9 149 aa6.93□□□□□ -1.3
SDCCAG3-208ENST00000466579 AQP10Q96PS8 301 aa6.93□□□□□ -1.3
SDCCAG3-208ENST00000466579 SAV1Q9H4B6 383 aaPredicted RBP6.93□□□□□ -1.3
SDCCAG3-208ENST00000466579 A0A0J9YX75 114 aa6.92□□□□□ -1.3
SDCCAG3-208ENST00000466579 G3V3Q6 166 aa6.92□□□□□ -1.3
SDCCAG3-208ENST00000466579 C3orf84H3BNL1 204 aa6.92□□□□□ -1.3
SDCCAG3-208ENST00000466579 IGLC2P0DOY2 106 aa6.92□□□□□ -1.3
SDCCAG3-208ENST00000466579 ATF4P18848 351 aaPredicted RBP6.92□□□□□ -1.3
SDCCAG3-208ENST00000466579 C4BPBP20851 252 aa6.92□□□□□ -1.3
SDCCAG3-208ENST00000466579 Q5BKY6 102 aa6.92□□□□□ -1.3
SDCCAG3-208ENST00000466579 GDF5OSQ5U4N7 250 aa6.92□□□□□ -1.3
SDCCAG3-208ENST00000466579 BPIFA4PQ86YQ2 179 aa6.92□□□□□ -1.3
SDCCAG3-208ENST00000466579 CSNK1G2-AS1Q8NCQ2 148 aa6.92□□□□□ -1.3
SDCCAG3-208ENST00000466579 C16orf92Q96LL3 132 aa6.92□□□□□ -1.3
SDCCAG3-208ENST00000466579 HRH4Q9H3N8 390 aa6.92□□□□□ -1.3
SDCCAG3-208ENST00000466579 WFDC1Q9HC57 220 aa6.92□□□□□ -1.3
SDCCAG3-208ENST00000466579 KCNIP2Q9NS61 270 aa6.92□□□□□ -1.3
SDCCAG3-208ENST00000466579 TMEM14CQ9P0S9 112 aa6.92□□□□□ -1.3
SDCCAG3-208ENST00000466579 CA1P00915 261 aaPredicted RBP6.91□□□□□ -1.3
SDCCAG3-208ENST00000466579 LCN15Q6UWW0 184 aa6.91□□□□□ -1.3
SDCCAG3-208ENST00000466579 MUC7Q8TAX7 377 aa6.91□□□□□ -1.3
SDCCAG3-208ENST00000466579 SAT2Q96F10 170 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms