RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 GALR1P47211 349 aa13.67□□□□□ -0.22
HOXA9-203ENST00000465941 LINC00322Q6ZN03 302 aaPredicted RBP13.67□□□□□ -0.22
HOXA9-203ENST00000465941 FAM24BQ8N5W8 94 aa13.67□□□□□ -0.22
HOXA9-203ENST00000465941 PFDN5Q99471 154 aa13.67□□□□□ -0.22
HOXA9-203ENST00000465941 SRD5A3Q9H8P0 318 aa13.67□□□□□ -0.22
HOXA9-203ENST00000465941 MAP6D1Q9H9H5 199 aa13.67□□□□□ -0.22
HOXA9-203ENST00000465941 RPL7P18124 248 aaKnown RBP13.66□□□□□ -0.22
HOXA9-203ENST00000465941 ZNF266Q14584 549 aa13.66□□□□□ -0.22
HOXA9-203ENST00000465941 GATAD1Q8WUU5 269 aa13.66□□□□□ -0.22
HOXA9-203ENST00000465941 CITED4Q96RK1 184 aa13.66□□□□□ -0.22
HOXA9-203ENST00000465941 RBMY1BA6NDE4 496 aaKnown RBP13.65□□□□□ -0.22
HOXA9-203ENST00000465941 RBMY1EA6NEQ0 496 aaKnown RBP13.65□□□□□ -0.22
HOXA9-203ENST00000465941 SMLR1H3BR10 107 aa13.65□□□□□ -0.22
HOXA9-203ENST00000465941 RBMY1DP0C7P1 496 aaKnown RBP13.65□□□□□ -0.22
HOXA9-203ENST00000465941 APRG1Q8IVJ8 170 aa13.65□□□□□ -0.22
HOXA9-203ENST00000465941 RSG1Q9BU20 258 aa13.65□□□□□ -0.22
HOXA9-203ENST00000465941 MEOX2P50222 304 aa13.64□□□□□ -0.23
HOXA9-203ENST00000465941 DEFB131AP59861 70 aa13.64□□□□□ -0.23
HOXA9-203ENST00000465941 SNRPD3P62318 126 aaKnown RBP13.64□□□□□ -0.23
HOXA9-203ENST00000465941 SAMD13Q5VXD3 122 aa13.64□□□□□ -0.23
HOXA9-203ENST00000465941 MORN5Q5VZ52 161 aa13.64□□□□□ -0.23
HOXA9-203ENST00000465941 SBSPONQ8IVN8 264 aa13.64□□□□□ -0.23
HOXA9-203ENST00000465941 C17orf77Q96MU5 243 aa13.64□□□□□ -0.23
HOXA9-203ENST00000465941 SOCS3O14543 225 aa13.63□□□□□ -0.23
HOXA9-203ENST00000465941 MRPS12O15235 138 aaKnown RBP13.63□□□□□ -0.23
HOXA9-203ENST00000465941 ARPC5O15511 151 aa13.63□□□□□ -0.23
HOXA9-203ENST00000465941 ZNF688P0C7X2 276 aa13.63□□□□□ -0.23
HOXA9-203ENST00000465941 NHLRC4P0CG21 123 aaPredicted RBP13.63□□□□□ -0.23
HOXA9-203ENST00000465941 ST6GAL2Q96JF0 529 aa13.63□□□□□ -0.23
HOXA9-203ENST00000465941 HMSDA8MTL9 139 aa13.62□□□□□ -0.23
HOXA9-203ENST00000465941 ID1P41134 155 aa13.62□□□□□ -0.23
HOXA9-203ENST00000465941 PSMB3P49720 205 aa13.62□□□□□ -0.23
HOXA9-203ENST00000465941 GCSAMLQ5JQS6 135 aa13.62□□□□□ -0.23
HOXA9-203ENST00000465941 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.62□□□□□ -0.23
HOXA9-203ENST00000465941 BPIFA4PQ86YQ2 179 aa13.62□□□□□ -0.23
HOXA9-203ENST00000465941 OR11H4Q8NGC9 324 aa13.62□□□□□ -0.23
HOXA9-203ENST00000465941 MFFQ9GZY8 342 aa13.62□□□□□ -0.23
HOXA9-203ENST00000465941 TIMM9Q9Y5J7 89 aa13.62□□□□□ -0.23
HOXA9-203ENST00000465941 A0A087X0K7 114 aa13.61□□□□□ -0.23
HOXA9-203ENST00000465941 LOC102724200A0A096LPH7 203 aaPredicted RBP13.61□□□□□ -0.23
HOXA9-203ENST00000465941 ISLRO14498 428 aa13.61□□□□□ -0.23
HOXA9-203ENST00000465941 TAAR5O14804 337 aa13.61□□□□□ -0.23
HOXA9-203ENST00000465941 ATF4P18848 351 aaPredicted RBP13.61□□□□□ -0.23
HOXA9-203ENST00000465941 ZNF124Q15973 351 aa13.61□□□□□ -0.23
HOXA9-203ENST00000465941 HAGHQ16775 308 aa13.61□□□□□ -0.23
HOXA9-203ENST00000465941 PSMG4Q5JS54 123 aa13.61□□□□□ -0.23
HOXA9-203ENST00000465941 ASCL2Q99929 193 aa13.61□□□□□ -0.23
HOXA9-203ENST00000465941 PRKDCP78527 4128 aaKnown RBP13.6□□□□□ -0.23
HOXA9-203ENST00000465941 TRAV5A0A0B4J249 113 aa13.6□□□□□ -0.23
HOXA9-203ENST00000465941 FFAR4Q5NUL3 377 aa13.6□□□□□ -0.23
HOXA9-203ENST00000465941 FAM78BQ5VT40 261 aa13.6□□□□□ -0.23
HOXA9-203ENST00000465941 TCTE3Q8IZS6 198 aa13.6□□□□□ -0.23
HOXA9-203ENST00000465941 hCG_2014768A0A024R1R8 64 aa13.59□□□□□ -0.23
HOXA9-203ENST00000465941 BORCS7-ASMTA0A0B4J1R7 106 aa13.59□□□□□ -0.23
HOXA9-203ENST00000465941 ZNF345Q14585 488 aa13.59□□□□□ -0.23
HOXA9-203ENST00000465941 C16orf92Q96LL3 132 aa13.59□□□□□ -0.23
HOXA9-203ENST00000465941 RFNGQ9Y644 331 aa13.59□□□□□ -0.23
HOXA9-203ENST00000465941 IGLC2P0DOY2 106 aa13.58□□□□□ -0.24
HOXA9-203ENST00000465941 CXCL2P19875 107 aa13.58□□□□□ -0.24
HOXA9-203ENST00000465941 RPL7L1Q6DKI1 246 aaKnown RBP13.58□□□□□ -0.24
HOXA9-203ENST00000465941 KCNRGQ8N5I3 272 aa13.58□□□□□ -0.24
HOXA9-203ENST00000465941 HSD17B11Q8NBQ5 300 aa13.58□□□□□ -0.24
HOXA9-203ENST00000465941 OR2G3Q8NGZ4 309 aa13.58□□□□□ -0.24
HOXA9-203ENST00000465941 TM2D3Q9BRN9 247 aa13.58□□□□□ -0.24
HOXA9-203ENST00000465941 PSMG3Q9BT73 122 aaPredicted RBP13.58□□□□□ -0.24
HOXA9-203ENST00000465941 MRPL32Q9BYC8 188 aaKnown RBP13.58□□□□□ -0.24
HOXA9-203ENST00000465941 HRH4Q9H3N8 390 aa13.58□□□□□ -0.24
HOXA9-203ENST00000465941 TMEM14CQ9P0S9 112 aa13.58□□□□□ -0.24
HOXA9-203ENST00000465941 KIR2DL5BA0A0G2JN68 375 aa13.57□□□□□ -0.24
HOXA9-203ENST00000465941 KIR2DL5BA0A0G2JPC4 375 aa13.57□□□□□ -0.24
HOXA9-203ENST00000465941 JTBO76095 146 aa13.57□□□□□ -0.24
HOXA9-203ENST00000465941 M6PRP20645 277 aa13.57□□□□□ -0.24
HOXA9-203ENST00000465941 ATP6V0CP27449 155 aa13.57□□□□□ -0.24
HOXA9-203ENST00000465941 APOC4P55056 127 aa13.57□□□□□ -0.24
HOXA9-203ENST00000465941 SERF2P84101 59 aa13.57□□□□□ -0.24
HOXA9-203ENST00000465941 GUK1Q16774 197 aa13.57□□□□□ -0.24
HOXA9-203ENST00000465941 KIR2DL5AQ8N109 375 aa13.57□□□□□ -0.24
HOXA9-203ENST00000465941 KIR2DL5BQ8NHK3 375 aa13.57□□□□□ -0.24
HOXA9-203ENST00000465941 LINC00052Q96N35 136 aa13.57□□□□□ -0.24
HOXA9-203ENST00000465941 FUT9Q9Y231 359 aa13.57□□□□□ -0.24
HOXA9-203ENST00000465941 TRAV8-2A0A0B4J237 113 aa13.56□□□□□ -0.24
HOXA9-203ENST00000465941 A0A0D9SG52 128 aa13.56□□□□□ -0.24
HOXA9-203ENST00000465941 H3BQ15 152 aa13.56□□□□□ -0.24
HOXA9-203ENST00000465941 RHOBP62745 196 aa13.56□□□□□ -0.24
HOXA9-203ENST00000465941 ACOT6Q3I5F7 207 aaPredicted RBP13.56□□□□□ -0.24
HOXA9-203ENST00000465941 SPATA31B1PQ5VZV4 182 aa13.56□□□□□ -0.24
HOXA9-203ENST00000465941 LCN15Q6UWW0 184 aa13.56□□□□□ -0.24
HOXA9-203ENST00000465941 MIR17HGQ75NE6 70 aa13.56□□□□□ -0.24
HOXA9-203ENST00000465941 STHQ8IWL8 128 aa13.56□□□□□ -0.24
HOXA9-203ENST00000465941 GNPNAT1Q96EK6 184 aaPredicted RBP13.56□□□□□ -0.24
HOXA9-203ENST00000465941 FAM167A-AS1Q96KT0 104 aa13.56□□□□□ -0.24
HOXA9-203ENST00000465941 SLC25A2Q9BXI2 301 aa13.56□□□□□ -0.24
HOXA9-203ENST00000465941 CYTL1Q9NRR1 136 aa13.56□□□□□ -0.24
HOXA9-203ENST00000465941 A0A1B0GVG6 124 aa13.55□□□□□ -0.24
HOXA9-203ENST00000465941 KNCNA6PVL3 124 aa13.55□□□□□ -0.24
HOXA9-203ENST00000465941 RPL35AP18077 110 aaKnown RBP13.55□□□□□ -0.24
HOXA9-203ENST00000465941 ACTL10Q5JWF8 245 aa13.55□□□□□ -0.24
HOXA9-203ENST00000465941 AKAP14Q86UN6 197 aa13.55□□□□□ -0.24
HOXA9-203ENST00000465941 LRRC20Q8TCA0 184 aa13.55□□□□□ -0.24
HOXA9-203ENST00000465941 SAT2Q96F10 170 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms