RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 TEX46H3BTG2 121 aa13.08□□□□□ -0.31
PTPRU-206ENST00000465525 H2AFB1P0C5Y9 115 aa13.08□□□□□ -0.31
PTPRU-206ENST00000465525 FAM167A-AS1Q96KT0 104 aa13.08□□□□□ -0.31
PTPRU-206ENST00000465525 RNF2Q99496 336 aa13.08□□□□□ -0.31
PTPRU-206ENST00000465525 MAP1LC3BQ9GZQ8 125 aa13.08□□□□□ -0.31
PTPRU-206ENST00000465525 C2orf70A6NJV1 201 aa13.08□□□□□ -0.32
PTPRU-206ENST00000465525 OR7C2O60412 319 aa13.08□□□□□ -0.32
PTPRU-206ENST00000465525 ARL14EPLP0DKL9 152 aa13.08□□□□□ -0.32
PTPRU-206ENST00000465525 C8orf88P0DMB2 117 aa13.08□□□□□ -0.32
PTPRU-206ENST00000465525 PYYP10082 97 aa13.08□□□□□ -0.32
PTPRU-206ENST00000465525 IQCF2Q8IXL9 164 aa13.08□□□□□ -0.32
PTPRU-206ENST00000465525 OR9G4Q8NGQ1 327 aa13.08□□□□□ -0.32
PTPRU-206ENST00000465525 TMPRSS5Q9H3S3 457 aa13.08□□□□□ -0.32
PTPRU-206ENST00000465525 TECRQ9NZ01 308 aaKnown RBP13.08□□□□□ -0.32
PTPRU-206ENST00000465525 U3KQE9 123 aa13.08□□□□□ -0.32
PTPRU-206ENST00000465525 K7EMT4 169 aa13.07□□□□□ -0.32
PTPRU-206ENST00000465525 OVOL1O14753 267 aa13.07□□□□□ -0.32
PTPRU-206ENST00000465525 BUB3O43684 328 aa13.07□□□□□ -0.32
PTPRU-206ENST00000465525 OR10J4P0C629 311 aa13.07□□□□□ -0.32
PTPRU-206ENST00000465525 ADAMTSL5Q6ZMM2 481 aa13.07□□□□□ -0.32
PTPRU-206ENST00000465525 ZNF503Q96F45 646 aa13.07□□□□□ -0.32
PTPRU-206ENST00000465525 RHPN1-AS1Q9BWJ2 59 aa13.07□□□□□ -0.32
PTPRU-206ENST00000465525 HRH4Q9H3N8 390 aa13.07□□□□□ -0.32
PTPRU-206ENST00000465525 SMPXQ9UHP9 88 aa13.07□□□□□ -0.32
PTPRU-206ENST00000465525 H3BTX0 84 aa13.06□□□□□ -0.32
PTPRU-206ENST00000465525 STAG3L2P0CL84 134 aa13.06□□□□□ -0.32
PTPRU-206ENST00000465525 STAG3L3P0CL85 134 aa13.06□□□□□ -0.32
PTPRU-206ENST00000465525 FOLR2P14207 255 aa13.06□□□□□ -0.32
PTPRU-206ENST00000465525 CBLN1P23435 193 aa13.06□□□□□ -0.32
PTPRU-206ENST00000465525 BLOC1S1P78537 153 aa13.06□□□□□ -0.32
PTPRU-206ENST00000465525 CCL20P78556 96 aa13.06□□□□□ -0.32
PTPRU-206ENST00000465525 KHDC3LQ587J8 217 aa13.06□□□□□ -0.32
PTPRU-206ENST00000465525 IL34Q6ZMJ4 242 aa13.06□□□□□ -0.32
PTPRU-206ENST00000465525 OR8I2Q8N0Y5 310 aa13.06□□□□□ -0.32
PTPRU-206ENST00000465525 MBD3L1Q8WWY6 194 aa13.06□□□□□ -0.32
PTPRU-206ENST00000465525 ELOVL1Q9BW60 279 aa13.06□□□□□ -0.32
PTPRU-206ENST00000465525 ANK2Q01484 3957 aa13.06□□□□□ -0.32
PTPRU-206ENST00000465525 CHEK1O14757 476 aa13.05□□□□□ -0.32
PTPRU-206ENST00000465525 TAS2R45P59539 299 aa13.05□□□□□ -0.32
PTPRU-206ENST00000465525 LINC00482Q8N8I6 264 aa13.05□□□□□ -0.32
PTPRU-206ENST00000465525 SAT2Q96F10 170 aaPredicted RBP13.05□□□□□ -0.32
PTPRU-206ENST00000465525 NARS2Q96I59 477 aaKnown RBP13.05□□□□□ -0.32
PTPRU-206ENST00000465525 PEMTQ9UBM1 199 aa13.05□□□□□ -0.32
PTPRU-206ENST00000465525 VWFP04275 2813 aa13.05□□□□□ -0.32
PTPRU-206ENST00000465525 CSN3P07498 182 aa13.05□□□□□ -0.32
PTPRU-206ENST00000465525 GP9P14770 177 aa13.05□□□□□ -0.32
PTPRU-206ENST00000465525 C16orf54Q6UWD8 224 aa13.05□□□□□ -0.32
PTPRU-206ENST00000465525 S100A7AQ86SG5 101 aa13.05□□□□□ -0.32
PTPRU-206ENST00000465525 PAXXQ9BUH6 204 aa13.05□□□□□ -0.32
PTPRU-206ENST00000465525 CXorf1O96002 111 aa13.04□□□□□ -0.32
PTPRU-206ENST00000465525 GCHFRP30047 84 aa13.04□□□□□ -0.32
PTPRU-206ENST00000465525 GLMPQ8WWB7 406 aa13.04□□□□□ -0.32
PTPRU-206ENST00000465525 OR51M1Q9H341 326 aa13.04□□□□□ -0.32
PTPRU-206ENST00000465525 MLXQ9UH92 298 aa13.04□□□□□ -0.32
PTPRU-206ENST00000465525 IGKV3-7A0A075B6H7 116 aa13.03□□□□□ -0.32
PTPRU-206ENST00000465525 UBE2L3P68036 154 aaKnown RBP13.03□□□□□ -0.32
PTPRU-206ENST00000465525 SMAD5-AS1Q9Y6J3 95 aa13.03□□□□□ -0.32
PTPRU-206ENST00000465525 A0A1W2PS18 150 aa13.02□□□□□ -0.32
PTPRU-206ENST00000465525 H3BQ15 152 aa13.02□□□□□ -0.32
PTPRU-206ENST00000465525 MRPS12O15235 138 aaKnown RBP13.02□□□□□ -0.32
PTPRU-206ENST00000465525 S100A7P31151 101 aa13.02□□□□□ -0.32
PTPRU-206ENST00000465525 RPL11P62913 178 aaKnown RBP13.02□□□□□ -0.32
PTPRU-206ENST00000465525 BPIFA4PQ86YQ2 179 aa13.02□□□□□ -0.32
PTPRU-206ENST00000465525 BLNKQ8WV28 456 aa13.02□□□□□ -0.32
PTPRU-206ENST00000465525 FXYD5Q96DB9 178 aa13.02□□□□□ -0.32
PTPRU-206ENST00000465525 GRAMD2BQ96HH9 432 aa13.02□□□□□ -0.32
PTPRU-206ENST00000465525 C17orf77Q96MU5 243 aa13.02□□□□□ -0.32
PTPRU-206ENST00000465525 TOR2AQ5JU69 321 aa13.02□□□□□ -0.33
PTPRU-206ENST00000465525 C1orf194Q5T5A4 169 aa13.02□□□□□ -0.33
PTPRU-206ENST00000465525 SIGLEC15Q6ZMC9 328 aa13.02□□□□□ -0.33
PTPRU-206ENST00000465525 PQLC2Q6ZP29 291 aa13.02□□□□□ -0.33
PTPRU-206ENST00000465525 TCF24Q7RTU0 167 aa13.02□□□□□ -0.33
PTPRU-206ENST00000465525 EIF4E3Q8N5X7 224 aaKnown RBP13.02□□□□□ -0.33
PTPRU-206ENST00000465525 WFDC9Q8NEX5 89 aa13.02□□□□□ -0.33
PTPRU-206ENST00000465525 TRAV1-1A0A0B4J248 108 aa13.01□□□□□ -0.33
PTPRU-206ENST00000465525 SAP30O75446 220 aa13.01□□□□□ -0.33
PTPRU-206ENST00000465525 RPL7P18124 248 aaKnown RBP13.01□□□□□ -0.33
PTPRU-206ENST00000465525 UBE2G2P60604 165 aa13.01□□□□□ -0.33
PTPRU-206ENST00000465525 DYNLRB2Q8TF09 96 aa13.01□□□□□ -0.33
PTPRU-206ENST00000465525 MARC2Q969Z3 335 aa13.01□□□□□ -0.33
PTPRU-206ENST00000465525 TMEM231Q9H6L2 316 aa13.01□□□□□ -0.33
PTPRU-206ENST00000465525 ZNF586Q9NXT0 402 aa13.01□□□□□ -0.33
PTPRU-206ENST00000465525 TMEM14CQ9P0S9 112 aa13.01□□□□□ -0.33
PTPRU-206ENST00000465525 ZNF785A8K8V0 405 aa13□□□□□ -0.33
PTPRU-206ENST00000465525 HBE1P02100 147 aa13□□□□□ -0.33
PTPRU-206ENST00000465525 IGLC2P0DOY2 106 aa13□□□□□ -0.33
PTPRU-206ENST00000465525 ATF4P18848 351 aaPredicted RBP13□□□□□ -0.33
PTPRU-206ENST00000465525 GBGT1Q8N5D6 347 aa13□□□□□ -0.33
PTPRU-206ENST00000465525 GNG13Q9P2W3 67 aa13□□□□□ -0.33
PTPRU-206ENST00000465525 TRRAPQ9Y4A5 3859 aa13□□□□□ -0.33
PTPRU-206ENST00000465525 CD33P20138 364 aa12.99□□□□□ -0.33
PTPRU-206ENST00000465525 BMI1P35226 326 aa12.99□□□□□ -0.33
PTPRU-206ENST00000465525 GALR1P47211 349 aa12.99□□□□□ -0.33
PTPRU-206ENST00000465525 STXBP6Q8NFX7 210 aa12.99□□□□□ -0.33
PTPRU-206ENST00000465525 LYPD6BQ8NI32 183 aa12.99□□□□□ -0.33
PTPRU-206ENST00000465525 SLC17A3O00476 420 aa12.99□□□□□ -0.33
PTPRU-206ENST00000465525 NBEAP1P0C6P0 100 aa12.99□□□□□ -0.33
PTPRU-206ENST00000465525 PRB4P10163 310 aaPredicted RBP12.99□□□□□ -0.33
PTPRU-206ENST00000465525 HAGHQ16775 308 aa12.99□□□□□ -0.33
PTPRU-206ENST00000465525 GPR82Q96P67 336 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms