RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 C16orf54Q6UWD8 224 aa12.65□□□□□ -0.38
VPS52-215ENST00000464425 STXBP6Q8NFX7 210 aa12.65□□□□□ -0.38
VPS52-215ENST00000464425 PXMP4Q9Y6I8 212 aa12.65□□□□□ -0.38
VPS52-215ENST00000464425 LOC102724200A0A096LPH7 203 aaPredicted RBP12.64□□□□□ -0.39
VPS52-215ENST00000464425 BORCS7-ASMTA0A0B4J1R7 106 aa12.64□□□□□ -0.39
VPS52-215ENST00000464425 JTBO76095 146 aa12.64□□□□□ -0.39
VPS52-215ENST00000464425 ZNF124Q15973 351 aa12.64□□□□□ -0.39
VPS52-215ENST00000464425 PATE2Q6UY27 113 aa12.64□□□□□ -0.39
VPS52-215ENST00000464425 FAM24BQ8N5W8 94 aa12.64□□□□□ -0.39
VPS52-215ENST00000464425 GLMPQ8WWB7 406 aa12.64□□□□□ -0.39
VPS52-215ENST00000464425 WWC2-AS2Q96NR7 200 aa12.64□□□□□ -0.39
VPS52-215ENST00000464425 SPATA25Q9BR10 227 aa12.64□□□□□ -0.39
VPS52-215ENST00000464425 RETNQ9HD89 108 aa12.64□□□□□ -0.39
VPS52-215ENST00000464425 DNAJC4Q9NNZ3 241 aa12.64□□□□□ -0.39
VPS52-215ENST00000464425 RNF24Q9Y225 148 aa12.64□□□□□ -0.39
VPS52-215ENST00000464425 HIGD1AQ9Y241 93 aa12.64□□□□□ -0.39
VPS52-215ENST00000464425 TIMM9Q9Y5J7 89 aa12.64□□□□□ -0.39
VPS52-215ENST00000464425 OR5G3P0C626 314 aa12.63□□□□□ -0.39
VPS52-215ENST00000464425 CXCL2P19875 107 aa12.63□□□□□ -0.39
VPS52-215ENST00000464425 CMC4P56277 68 aaPredicted RBP12.63□□□□□ -0.39
VPS52-215ENST00000464425 CD300CQ08708 224 aa12.63□□□□□ -0.39
VPS52-215ENST00000464425 OR1L4Q8NGR5 311 aa12.63□□□□□ -0.39
VPS52-215ENST00000464425 TMEM37Q8WXS4 190 aa12.63□□□□□ -0.39
VPS52-215ENST00000464425 PPP1R14BQ96C90 147 aa12.63□□□□□ -0.39
VPS52-215ENST00000464425 PFDN5Q99471 154 aa12.63□□□□□ -0.39
VPS52-215ENST00000464425 FAM110AQ9BQ89 295 aa12.63□□□□□ -0.39
VPS52-215ENST00000464425 RSG1Q9BU20 258 aa12.63□□□□□ -0.39
VPS52-215ENST00000464425 SLC25A39Q9BZJ4 359 aaPredicted RBP12.63□□□□□ -0.39
VPS52-215ENST00000464425 ARV1Q9H2C2 271 aa12.63□□□□□ -0.39
VPS52-215ENST00000464425 MAP6D1Q9H9H5 199 aa12.63□□□□□ -0.39
VPS52-215ENST00000464425 DOK5Q9P104 306 aa12.63□□□□□ -0.39
VPS52-215ENST00000464425 NBEAL2Q6ZNJ1 2754 aa12.63□□□□□ -0.39
VPS52-215ENST00000464425 HELTA6NFD8 242 aa12.62□□□□□ -0.39
VPS52-215ENST00000464425 ZNF98A6NK75 572 aa12.62□□□□□ -0.39
VPS52-215ENST00000464425 COX7A2P2O60397 106 aa12.62□□□□□ -0.39
VPS52-215ENST00000464425 RPL35AP18077 110 aaKnown RBP12.62□□□□□ -0.39
VPS52-215ENST00000464425 C10orf113Q5VZT2 155 aa12.62□□□□□ -0.39
VPS52-215ENST00000464425 RPL7L1Q6DKI1 246 aaKnown RBP12.62□□□□□ -0.39
VPS52-215ENST00000464425 GATAD1Q8WUU5 269 aa12.62□□□□□ -0.39
VPS52-215ENST00000464425 ARPC5LQ9BPX5 153 aa12.62□□□□□ -0.39
VPS52-215ENST00000464425 SHANK2-AS3Q9BTD1 123 aa12.62□□□□□ -0.39
VPS52-215ENST00000464425 CYTL1Q9NRR1 136 aa12.62□□□□□ -0.39
VPS52-215ENST00000464425 TENM3Q9P273 2699 aa12.61□□□□□ -0.39
VPS52-215ENST00000464425 STAB2Q8WWQ8 2551 aa12.61□□□□□ -0.39
VPS52-215ENST00000464425 TRAV2A0A0B4J234 112 aa12.61□□□□□ -0.39
VPS52-215ENST00000464425 H3BRN7 92 aa12.61□□□□□ -0.39
VPS52-215ENST00000464425 DEFB131AP59861 70 aa12.61□□□□□ -0.39
VPS52-215ENST00000464425 ZFP69Q49AA0 526 aa12.61□□□□□ -0.39
VPS52-215ENST00000464425 LEMD1Q68G75 181 aa12.61□□□□□ -0.39
VPS52-215ENST00000464425 GPR82Q96P67 336 aa12.61□□□□□ -0.39
VPS52-215ENST00000464425 PSMG3Q9BT73 122 aaPredicted RBP12.61□□□□□ -0.39
VPS52-215ENST00000464425 KANTRA0A1W2PQU2 76 aa12.6□□□□□ -0.39
VPS52-215ENST00000464425 K7EQG2 157 aa12.6□□□□□ -0.39
VPS52-215ENST00000464425 SERF2P84101 59 aa12.6□□□□□ -0.39
VPS52-215ENST00000464425 LGALSLQ3ZCW2 172 aaPredicted RBP12.6□□□□□ -0.39
VPS52-215ENST00000464425 SIGLEC15Q6ZMC9 328 aa12.6□□□□□ -0.39
VPS52-215ENST00000464425 TMUB2Q71RG4 321 aa12.6□□□□□ -0.39
VPS52-215ENST00000464425 LINC00305Q7Z4B0 112 aa12.6□□□□□ -0.39
VPS52-215ENST00000464425 OR8I2Q8N0Y5 310 aa12.6□□□□□ -0.39
VPS52-215ENST00000464425 HSD17B11Q8NBQ5 300 aa12.6□□□□□ -0.39
VPS52-215ENST00000464425 OR2G3Q8NGZ4 309 aa12.6□□□□□ -0.39
VPS52-215ENST00000464425 DCANP1Q8TF63 244 aa12.6□□□□□ -0.39
VPS52-215ENST00000464425 GNPNAT1Q96EK6 184 aaPredicted RBP12.6□□□□□ -0.39
VPS52-215ENST00000464425 UHRF2Q96PU4 802 aa12.6□□□□□ -0.39
VPS52-215ENST00000464425 BCL2L11O43521 198 aa12.59□□□□□ -0.39
VPS52-215ENST00000464425 ATP6V0CP27449 155 aa12.59□□□□□ -0.39
VPS52-215ENST00000464425 ZNF688P0C7X2 276 aa12.58□□□□□ -0.4
VPS52-215ENST00000464425 APOC4P55056 127 aa12.58□□□□□ -0.4
VPS52-215ENST00000464425 FFAR4Q5NUL3 377 aa12.58□□□□□ -0.4
VPS52-215ENST00000464425 SCRT1Q9BWW7 348 aa12.58□□□□□ -0.4
VPS52-215ENST00000464425 SLC25A22Q9H936 323 aa12.58□□□□□ -0.4
VPS52-215ENST00000464425 PFDN1O60925 122 aa12.57□□□□□ -0.4
VPS52-215ENST00000464425 RPL7P18124 248 aaKnown RBP12.57□□□□□ -0.4
VPS52-215ENST00000464425 GCSAMLQ5JQS6 135 aa12.57□□□□□ -0.4
VPS52-215ENST00000464425 SLC25A32Q9H2D1 315 aa12.57□□□□□ -0.4
VPS52-215ENST00000464425 NRN1Q9NPD7 142 aa12.57□□□□□ -0.4
VPS52-215ENST00000464425 RFNGQ9Y644 331 aa12.57□□□□□ -0.4
VPS52-215ENST00000464425 MBP02144 154 aa12.56□□□□□ -0.4
VPS52-215ENST00000464425 M6PRP20645 277 aa12.56□□□□□ -0.4
VPS52-215ENST00000464425 GALR1P47211 349 aa12.56□□□□□ -0.4
VPS52-215ENST00000464425 EIF5AP63241 154 aaKnown RBP12.56□□□□□ -0.4
VPS52-215ENST00000464425 ACOT6Q3I5F7 207 aaPredicted RBP12.56□□□□□ -0.4
VPS52-215ENST00000464425 MRPL32Q9BYC8 188 aaKnown RBP12.56□□□□□ -0.4
VPS52-215ENST00000464425 SEPSECSQ9HD40 501 aaKnown RBP12.56□□□□□ -0.4
VPS52-215ENST00000464425 KIR2DL5BA0A0G2JN68 375 aa12.55□□□□□ -0.4
VPS52-215ENST00000464425 KIR2DL5BA0A0G2JPC4 375 aa12.55□□□□□ -0.4
VPS52-215ENST00000464425 KNCNA6PVL3 124 aa12.55□□□□□ -0.4
VPS52-215ENST00000464425 SPP1P10451 314 aa12.55□□□□□ -0.4
VPS52-215ENST00000464425 PSMG4Q5JS54 123 aa12.55□□□□□ -0.4
VPS52-215ENST00000464425 FAM78BQ5VT40 261 aa12.55□□□□□ -0.4
VPS52-215ENST00000464425 MORN5Q5VZ52 161 aa12.55□□□□□ -0.4
VPS52-215ENST00000464425 BPIFA4PQ86YQ2 179 aa12.55□□□□□ -0.4
VPS52-215ENST00000464425 KIR2DL5AQ8N109 375 aa12.55□□□□□ -0.4
VPS52-215ENST00000464425 C9orf62Q8N4C0 152 aa12.55□□□□□ -0.4
VPS52-215ENST00000464425 KIR2DL5BQ8NHK3 375 aa12.55□□□□□ -0.4
VPS52-215ENST00000464425 ZNF471Q9BX82 626 aaPredicted RBP12.55□□□□□ -0.4
VPS52-215ENST00000464425 SH3BGRL3Q9H299 93 aa12.55□□□□□ -0.4
VPS52-215ENST00000464425 MRPS12O15235 138 aaKnown RBP12.54□□□□□ -0.4
VPS52-215ENST00000464425 C4BPBP20851 252 aa12.54□□□□□ -0.4
VPS52-215ENST00000464425 MEOX2P50222 304 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms