RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 VSIRQ9H7M9 311 aa16.91■□□□□ 0.3
SSNA1-203ENST00000463511 IGHV3-66A0A0C4DH42 116 aa16.9■□□□□ 0.3
SSNA1-203ENST00000463511 AGPAT2O15120 278 aa16.9■□□□□ 0.3
SSNA1-203ENST00000463511 HNRNPCP07910 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
SSNA1-203ENST00000463511 DEFB131AP59861 70 aa16.9■□□□□ 0.3
SSNA1-203ENST00000463511 BPIFCQ8NFQ6 507 aa16.9■□□□□ 0.3
SSNA1-203ENST00000463511 SLC45A2Q9UMX9 530 aa16.9■□□□□ 0.3
SSNA1-203ENST00000463511 UBE2L5PA0A1B0GUS4 154 aa16.89■□□□□ 0.29
SSNA1-203ENST00000463511 DNASE2O00115 360 aaPredicted RBP16.89■□□□□ 0.29
SSNA1-203ENST00000463511 CFDP00746 253 aaPredicted RBP16.89■□□□□ 0.29
SSNA1-203ENST00000463511 LYZP61626 148 aa16.89■□□□□ 0.29
SSNA1-203ENST00000463511 SELENOTP62341 195 aa16.89■□□□□ 0.29
SSNA1-203ENST00000463511 CLINT1Q14677 625 aa16.89■□□□□ 0.29
SSNA1-203ENST00000463511 FAM24BQ8N5W8 94 aa16.89■□□□□ 0.29
SSNA1-203ENST00000463511 PBDC1Q9BVG4 233 aa16.89■□□□□ 0.29
SSNA1-203ENST00000463511 RABAC1Q9UI14 185 aa16.89■□□□□ 0.29
SSNA1-203ENST00000463511 IGLL5B9A064 214 aa16.88■□□□□ 0.29
SSNA1-203ENST00000463511 SMLR1H3BR10 107 aa16.88■□□□□ 0.29
SSNA1-203ENST00000463511 DFFBO76075 338 aa16.88■□□□□ 0.29
SSNA1-203ENST00000463511 CD5P06127 495 aa16.88■□□□□ 0.29
SSNA1-203ENST00000463511 TCTAP57738 103 aa16.88■□□□□ 0.29
SSNA1-203ENST00000463511 RPL11P62913 178 aaKnown RBP16.88■□□□□ 0.29
SSNA1-203ENST00000463511 AQP10Q96PS8 301 aa16.88■□□□□ 0.29
SSNA1-203ENST00000463511 hCG_2014768A0A024R1R8 64 aa16.87■□□□□ 0.29
SSNA1-203ENST00000463511 A0A1W2PS18 150 aa16.87■□□□□ 0.29
SSNA1-203ENST00000463511 EIF2B2P49770 351 aaKnown RBP16.87■□□□□ 0.29
SSNA1-203ENST00000463511 ZNF546Q86UE3 836 aa16.87■□□□□ 0.29
SSNA1-203ENST00000463511 Q8NAQ8 132 aa16.87■□□□□ 0.29
SSNA1-203ENST00000463511 SMIM3Q9BZL3 60 aa16.87■□□□□ 0.29
SSNA1-203ENST00000463511 APLNQ9ULZ1 77 aa16.87■□□□□ 0.29
SSNA1-203ENST00000463511 KIAA1109Q2LD37 5005 aa16.86■□□□□ 0.29
SSNA1-203ENST00000463511 PCLOQ9Y6V0 5065 aa16.86■□□□□ 0.29
SSNA1-203ENST00000463511 FXYD6-FXYD2A0A087WZ82 144 aa16.86■□□□□ 0.29
SSNA1-203ENST00000463511 LINC00869P0C866 280 aa16.86■□□□□ 0.29
SSNA1-203ENST00000463511 FGF7P21781 194 aa16.86■□□□□ 0.29
SSNA1-203ENST00000463511 CAMLGP49069 296 aa16.86■□□□□ 0.29
SSNA1-203ENST00000463511 PLP1P60201 277 aa16.86■□□□□ 0.29
SSNA1-203ENST00000463511 RAB31Q13636 194 aa16.86■□□□□ 0.29
SSNA1-203ENST00000463511 STHQ8IWL8 128 aa16.86■□□□□ 0.29
SSNA1-203ENST00000463511 ATP5SQ99766 215 aa16.86■□□□□ 0.29
SSNA1-203ENST00000463511 WFDC1Q9HC57 220 aa16.86■□□□□ 0.29
SSNA1-203ENST00000463511 TNFSF18Q9UNG2 199 aa16.86■□□□□ 0.29
SSNA1-203ENST00000463511 A0A1B0GVG6 124 aa16.85■□□□□ 0.29
SSNA1-203ENST00000463511 ORM2P19652 201 aa16.85■□□□□ 0.29
SSNA1-203ENST00000463511 NUP62P37198 522 aaPredicted RBP16.85■□□□□ 0.29
SSNA1-203ENST00000463511 C16orf54Q6UWD8 224 aa16.85■□□□□ 0.29
SSNA1-203ENST00000463511 NARS2Q96I59 477 aaKnown RBP16.85■□□□□ 0.29
SSNA1-203ENST00000463511 ST6GAL2Q96JF0 529 aa16.85■□□□□ 0.29
SSNA1-203ENST00000463511 TMEM231Q9H6L2 316 aa16.85■□□□□ 0.29
SSNA1-203ENST00000463511 TRAV2A0A0B4J234 112 aa16.84■□□□□ 0.29
SSNA1-203ENST00000463511 C11orf94C9JXX5 98 aa16.84■□□□□ 0.29
SSNA1-203ENST00000463511 BUB3O43684 328 aa16.84■□□□□ 0.29
SSNA1-203ENST00000463511 MPDU1O75352 247 aa16.84■□□□□ 0.29
SSNA1-203ENST00000463511 OPCMLQ14982 345 aa16.84■□□□□ 0.29
SSNA1-203ENST00000463511 OR1B1Q8NGR6 318 aa16.84■□□□□ 0.29
SSNA1-203ENST00000463511 WDR61Q9GZS3 305 aaKnown RBP16.84■□□□□ 0.29
SSNA1-203ENST00000463511 IGHV4-28A0A0C4DH34 117 aa16.83■□□□□ 0.28
SSNA1-203ENST00000463511 RNF222A6NCQ9 220 aa16.83■□□□□ 0.28
SSNA1-203ENST00000463511 RBMY1A1P0DJD3 496 aaKnown RBP16.83■□□□□ 0.28
SSNA1-203ENST00000463511 RBMY1CP0DJD4 496 aa16.83■□□□□ 0.28
SSNA1-203ENST00000463511 RPL29P47914 159 aaKnown RBP16.83■□□□□ 0.28
SSNA1-203ENST00000463511 RBMY1FQ15415 496 aaKnown RBP16.83■□□□□ 0.28
SSNA1-203ENST00000463511 MIC13Q5XKP0 118 aa16.83■□□□□ 0.28
SSNA1-203ENST00000463511 PATE2Q6UY27 113 aa16.83■□□□□ 0.28
SSNA1-203ENST00000463511 INO80EQ8NBZ0 244 aaPredicted RBP16.83■□□□□ 0.28
SSNA1-203ENST00000463511 GLMPQ8WWB7 406 aa16.83■□□□□ 0.28
SSNA1-203ENST00000463511 HRH4Q9H3N8 390 aa16.83■□□□□ 0.28
SSNA1-203ENST00000463511 DOK5Q9P104 306 aa16.83■□□□□ 0.28
SSNA1-203ENST00000463511 GIG44P09565 113 aaPredicted RBP16.82■□□□□ 0.28
SSNA1-203ENST00000463511 OR11H4Q8NGC9 324 aa16.82■□□□□ 0.28
SSNA1-203ENST00000463511 GRAMD2BQ96HH9 432 aa16.82■□□□□ 0.28
SSNA1-203ENST00000463511 NPCDR1Q9BY65 106 aa16.82■□□□□ 0.28
SSNA1-203ENST00000463511 ARL6Q9H0F7 186 aa16.82■□□□□ 0.28
SSNA1-203ENST00000463511 HYPMO75409 117 aa16.81■□□□□ 0.28
SSNA1-203ENST00000463511 HLA-DMBP28068 263 aa16.81■□□□□ 0.28
SSNA1-203ENST00000463511 PXDC1Q5TGL8 231 aa16.81■□□□□ 0.28
SSNA1-203ENST00000463511 TRPT1Q86TN4 253 aaKnown RBP16.81■□□□□ 0.28
SSNA1-203ENST00000463511 STXBP6Q8NFX7 210 aa16.81■□□□□ 0.28
SSNA1-203ENST00000463511 PFDN2Q9UHV9 154 aa16.81■□□□□ 0.28
SSNA1-203ENST00000463511 FAT2Q9NYQ8 4349 aa16.8■□□□□ 0.28
SSNA1-203ENST00000463511 IFNA5P01569 189 aa16.8■□□□□ 0.28
SSNA1-203ENST00000463511 OR5G3P0C626 314 aa16.8■□□□□ 0.28
SSNA1-203ENST00000463511 C4BPBP20851 252 aa16.8■□□□□ 0.28
SSNA1-203ENST00000463511 Q6ZTC4 211 aa16.8■□□□□ 0.28
SSNA1-203ENST00000463511 PPP1R14BQ96C90 147 aa16.8■□□□□ 0.28
SSNA1-203ENST00000463511 PARD6GQ9BYG4 376 aaPredicted RBP16.8■□□□□ 0.28
SSNA1-203ENST00000463511 SLC39A9Q9NUM3 307 aa16.8■□□□□ 0.28
SSNA1-203ENST00000463511 HIGD1AQ9Y241 93 aa16.8■□□□□ 0.28
SSNA1-203ENST00000463511 PXMP4Q9Y6I8 212 aa16.8■□□□□ 0.28
SSNA1-203ENST00000463511 K7EQG2 157 aa16.79■□□□□ 0.28
SSNA1-203ENST00000463511 ARPC5O15511 151 aa16.79■□□□□ 0.28
SSNA1-203ENST00000463511 MIFP14174 115 aa16.79■□□□□ 0.28
SSNA1-203ENST00000463511 AP2S1P53680 142 aaPredicted RBP16.79■□□□□ 0.28
SSNA1-203ENST00000463511 C1orf194Q5T5A4 169 aa16.79■□□□□ 0.28
SSNA1-203ENST00000463511 SLC25A39Q9BZJ4 359 aaPredicted RBP16.79■□□□□ 0.28
SSNA1-203ENST00000463511 ZNF98A6NK75 572 aa16.78■□□□□ 0.28
SSNA1-203ENST00000463511 KNCNA6PVL3 124 aa16.78■□□□□ 0.28
SSNA1-203ENST00000463511 H3BRN7 92 aa16.78■□□□□ 0.28
SSNA1-203ENST00000463511 ZNF688P0C7X2 276 aa16.78■□□□□ 0.28
SSNA1-203ENST00000463511 SPP1P10451 314 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms