RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 ATP6V1FQ16864 119 aa12.04□□□□□ -0.48
SMARCD3-204ENST00000460431 SAMD13Q5VXD3 122 aa12.04□□□□□ -0.48
SMARCD3-204ENST00000460431 MORN3Q6PF18 240 aaPredicted RBP12.04□□□□□ -0.48
SMARCD3-204ENST00000460431 S100A7AQ86SG5 101 aa12.04□□□□□ -0.48
SMARCD3-204ENST00000460431 UHRF2Q96PU4 802 aa12.04□□□□□ -0.48
SMARCD3-204ENST00000460431 OR5AC2Q9NZP5 309 aa12.04□□□□□ -0.48
SMARCD3-204ENST00000460431 H3BMM0 161 aa12.03□□□□□ -0.48
SMARCD3-204ENST00000460431 SPP1P10451 314 aa12.03□□□□□ -0.48
SMARCD3-204ENST00000460431 CAMLGP49069 296 aa12.03□□□□□ -0.48
SMARCD3-204ENST00000460431 NHLH2Q02577 135 aa12.03□□□□□ -0.48
SMARCD3-204ENST00000460431 LRRC37A5PQ49AS3 106 aa12.03□□□□□ -0.48
SMARCD3-204ENST00000460431 IL17DQ8TAD2 202 aa12.03□□□□□ -0.48
SMARCD3-204ENST00000460431 PPP1R1CQ8WVI7 109 aa12.03□□□□□ -0.48
SMARCD3-204ENST00000460431 LINC00052Q96N35 136 aa12.03□□□□□ -0.48
SMARCD3-204ENST00000460431 ARV1Q9H2C2 271 aa12.03□□□□□ -0.48
SMARCD3-204ENST00000460431 RPL7P18124 248 aaKnown RBP12.02□□□□□ -0.49
SMARCD3-204ENST00000460431 TMEM41BQ5BJD5 291 aa12.02□□□□□ -0.49
SMARCD3-204ENST00000460431 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.02□□□□□ -0.49
SMARCD3-204ENST00000460431 CHAC2Q8WUX2 184 aa12.02□□□□□ -0.49
SMARCD3-204ENST00000460431 RNF126Q9BV68 326 aa12.02□□□□□ -0.49
SMARCD3-204ENST00000460431 SLC25A31Q9H0C2 315 aa12.02□□□□□ -0.49
SMARCD3-204ENST00000460431 RNF24Q9Y225 148 aa12.02□□□□□ -0.49
SMARCD3-204ENST00000460431 ALG5Q9Y673 324 aa12.02□□□□□ -0.49
SMARCD3-204ENST00000460431 CSMD3Q7Z407 3707 aa12.02□□□□□ -0.49
SMARCD3-204ENST00000460431 SACSQ9NZJ4 4579 aa12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 RYR2Q92736 4967 aa12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 A0A0J9YWU9 116 aa12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 HLA-DRB4P13762 266 aa12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 PRR20EP86478 221 aa12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 PRR20CP86479 221 aa12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 PRR20DP86480 221 aa12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 PRR20BP86481 221 aa12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 PRR20AP86496 221 aa12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 EWSR1Q01844 656 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 GDF5OSQ5U4N7 250 aa12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 MIC13Q5XKP0 118 aa12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 TMEM37Q8WXS4 190 aa12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 C16orf92Q96LL3 132 aa12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 RARRES2Q99969 163 aa12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 SAV1Q9H4B6 383 aaPredicted RBP12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 HLA-DRB4X5D2U9 266 aa12.01□□□□□ -0.49
SMARCD3-204ENST00000460431 ELOA3CA0A087WX78 387 aaPredicted RBP12□□□□□ -0.49
SMARCD3-204ENST00000460431 UBE2L5PA0A1B0GUS4 154 aa12□□□□□ -0.49
SMARCD3-204ENST00000460431 MPC2O95563 127 aa12□□□□□ -0.49
SMARCD3-204ENST00000460431 C4BPBP20851 252 aa12□□□□□ -0.49
SMARCD3-204ENST00000460431 RPL29P47914 159 aaKnown RBP12□□□□□ -0.49
SMARCD3-204ENST00000460431 DEFB1P60022 68 aa12□□□□□ -0.49
SMARCD3-204ENST00000460431 FOXI2Q6ZQN5 318 aa12□□□□□ -0.49
SMARCD3-204ENST00000460431 Q6ZRG5 221 aa12□□□□□ -0.49
SMARCD3-204ENST00000460431 LINC00305Q7Z4B0 112 aa12□□□□□ -0.49
SMARCD3-204ENST00000460431 OR5C1Q8NGR4 320 aa12□□□□□ -0.49
SMARCD3-204ENST00000460431 OR11H2Q8NH07 326 aa12□□□□□ -0.49
SMARCD3-204ENST00000460431 C20orf173Q96LM9 149 aa12□□□□□ -0.49
SMARCD3-204ENST00000460431 DNAJC4Q9NNZ3 241 aa12□□□□□ -0.49
SMARCD3-204ENST00000460431 STARD9Q9P2P6 4700 aa11.99□□□□□ -0.49
SMARCD3-204ENST00000460431 MRPS12O15235 138 aaKnown RBP11.99□□□□□ -0.49
SMARCD3-204ENST00000460431 COX7A2P2O60397 106 aa11.99□□□□□ -0.49
SMARCD3-204ENST00000460431 MPDU1O75352 247 aa11.99□□□□□ -0.49
SMARCD3-204ENST00000460431 ATF4P18848 351 aaPredicted RBP11.99□□□□□ -0.49
SMARCD3-204ENST00000460431 NUTF2P61970 127 aaKnown RBP11.99□□□□□ -0.49
SMARCD3-204ENST00000460431 BAXQ07812 192 aa11.99□□□□□ -0.49
SMARCD3-204ENST00000460431 OPCMLQ14982 345 aa11.99□□□□□ -0.49
SMARCD3-204ENST00000460431 C10orf113Q5VZT2 155 aa11.99□□□□□ -0.49
SMARCD3-204ENST00000460431 SPATA31B1PQ5VZV4 182 aa11.99□□□□□ -0.49
SMARCD3-204ENST00000460431 CLUHP3Q96NS8 147 aa11.99□□□□□ -0.49
SMARCD3-204ENST00000460431 RPRMQ9NS64 109 aa11.99□□□□□ -0.49
SMARCD3-204ENST00000460431 A0A087X0K7 114 aa11.98□□□□□ -0.49
SMARCD3-204ENST00000460431 TRAV8-2A0A0B4J237 113 aa11.98□□□□□ -0.49
SMARCD3-204ENST00000460431 PET100P0DJ07 73 aa11.98□□□□□ -0.49
SMARCD3-204ENST00000460431 FGF7P21781 194 aa11.98□□□□□ -0.49
SMARCD3-204ENST00000460431 CSNK1G2-AS1Q8NCQ2 148 aa11.98□□□□□ -0.49
SMARCD3-204ENST00000460431 SLC39A9Q9NUM3 307 aa11.98□□□□□ -0.49
SMARCD3-204ENST00000460431 CXCL3P19876 107 aa11.97□□□□□ -0.49
SMARCD3-204ENST00000460431 B2MP61769 119 aa11.97□□□□□ -0.49
SMARCD3-204ENST00000460431 FGL1Q08830 312 aa11.97□□□□□ -0.49
SMARCD3-204ENST00000460431 MORN5Q5VZ52 161 aa11.97□□□□□ -0.49
SMARCD3-204ENST00000460431 OR1L4Q8NGR5 311 aa11.97□□□□□ -0.49
SMARCD3-204ENST00000460431 C1QTNF4Q9BXJ3 329 aa11.97□□□□□ -0.49
SMARCD3-204ENST00000460431 A0A0J9YX75 114 aa11.96□□□□□ -0.49
SMARCD3-204ENST00000460431 ZNF705EA8MWA4 302 aaPredicted RBP11.96□□□□□ -0.49
SMARCD3-204ENST00000460431 F6UB75 175 aa11.96□□□□□ -0.49
SMARCD3-204ENST00000460431 IGFL4Q6B9Z1 124 aa11.96□□□□□ -0.49
SMARCD3-204ENST00000460431 EBLN2Q6P2I7 272 aa11.96□□□□□ -0.49
SMARCD3-204ENST00000460431 BPIFA4PQ86YQ2 179 aa11.96□□□□□ -0.49
SMARCD3-204ENST00000460431 PFDN5Q99471 154 aa11.96□□□□□ -0.49
SMARCD3-204ENST00000460431 NPCDR1Q9BY65 106 aa11.96□□□□□ -0.49
SMARCD3-204ENST00000460431 CLEC5AQ9NY25 188 aa11.96□□□□□ -0.49
SMARCD3-204ENST00000460431 PXMP4Q9Y6I8 212 aa11.96□□□□□ -0.49
SMARCD3-204ENST00000460431 A8MTW9 85 aa11.95□□□□□ -0.5
SMARCD3-204ENST00000460431 IGKV3-20P01619 116 aa11.95□□□□□ -0.5
SMARCD3-204ENST00000460431 CLINT1Q14677 625 aa11.95□□□□□ -0.5
SMARCD3-204ENST00000460431 FAM78BQ5VT40 261 aa11.95□□□□□ -0.5
SMARCD3-204ENST00000460431 RNF182Q8N6D2 247 aa11.95□□□□□ -0.5
SMARCD3-204ENST00000460431 OR4B1Q8NGF8 309 aa11.95□□□□□ -0.5
SMARCD3-204ENST00000460431 THAP6Q8TBB0 222 aa11.95□□□□□ -0.5
SMARCD3-204ENST00000460431 LYSTQ99698 3801 aa11.95□□□□□ -0.5
SMARCD3-204ENST00000460431 MED28Q9H204 178 aa11.95□□□□□ -0.5
SMARCD3-204ENST00000460431 C11orf68Q9H3H3 251 aaKnown RBP11.95□□□□□ -0.5
SMARCD3-204ENST00000460431 MBD2Q9UBB5 411 aa11.95□□□□□ -0.5
SMARCD3-204ENST00000460431 XCL2Q9UBD3 114 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms