RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 WDR83OSQ9Y284 106 aa12.7□□□□□ -0.38
USP39-208ENST00000455732 LCE6AA0A183 80 aa12.69□□□□□ -0.38
USP39-208ENST00000455732 H0YIZ8 118 aa12.69□□□□□ -0.38
USP39-208ENST00000455732 CA1P00915 261 aaPredicted RBP12.69□□□□□ -0.38
USP39-208ENST00000455732 RAB31Q13636 194 aa12.69□□□□□ -0.38
USP39-208ENST00000455732 ATP6V1FQ16864 119 aa12.69□□□□□ -0.38
USP39-208ENST00000455732 IL17DQ8TAD2 202 aa12.69□□□□□ -0.38
USP39-208ENST00000455732 C17orf77Q96MU5 243 aa12.69□□□□□ -0.38
USP39-208ENST00000455732 ARL6Q9H0F7 186 aa12.69□□□□□ -0.38
USP39-208ENST00000455732 OR5AC2Q9NZP5 309 aa12.69□□□□□ -0.38
USP39-208ENST00000455732 GIG44P09565 113 aaPredicted RBP12.68□□□□□ -0.38
USP39-208ENST00000455732 OR5G3P0C626 314 aa12.68□□□□□ -0.38
USP39-208ENST00000455732 RPL7P18124 248 aaKnown RBP12.68□□□□□ -0.38
USP39-208ENST00000455732 CAMLGP49069 296 aa12.68□□□□□ -0.38
USP39-208ENST00000455732 LRRC37A5PQ49AS3 106 aa12.68□□□□□ -0.38
USP39-208ENST00000455732 PATE2Q6UY27 113 aa12.68□□□□□ -0.38
USP39-208ENST00000455732 CHAC2Q8WUX2 184 aa12.68□□□□□ -0.38
USP39-208ENST00000455732 PPP1R1CQ8WVI7 109 aa12.68□□□□□ -0.38
USP39-208ENST00000455732 SLC25A31Q9H0C2 315 aa12.68□□□□□ -0.38
USP39-208ENST00000455732 ARV1Q9H2C2 271 aa12.68□□□□□ -0.38
USP39-208ENST00000455732 UBE2L5PA0A1B0GUS4 154 aa12.67□□□□□ -0.38
USP39-208ENST00000455732 H3BMM0 161 aa12.67□□□□□ -0.38
USP39-208ENST00000455732 HLA-DRB4P13762 266 aa12.67□□□□□ -0.38
USP39-208ENST00000455732 ATF4P18848 351 aaPredicted RBP12.67□□□□□ -0.38
USP39-208ENST00000455732 PRR20EP86478 221 aa12.67□□□□□ -0.38
USP39-208ENST00000455732 PRR20CP86479 221 aa12.67□□□□□ -0.38
USP39-208ENST00000455732 PRR20DP86480 221 aa12.67□□□□□ -0.38
USP39-208ENST00000455732 PRR20BP86481 221 aa12.67□□□□□ -0.38
USP39-208ENST00000455732 PRR20AP86496 221 aa12.67□□□□□ -0.38
USP39-208ENST00000455732 EWSR1Q01844 656 aaKnown RBP eCLIP12.67□□□□□ -0.38
USP39-208ENST00000455732 BAXQ07812 192 aa12.67□□□□□ -0.38
USP39-208ENST00000455732 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.67□□□□□ -0.38
USP39-208ENST00000455732 FOXI2Q6ZQN5 318 aa12.67□□□□□ -0.38
USP39-208ENST00000455732 UHRF2Q96PU4 802 aa12.67□□□□□ -0.38
USP39-208ENST00000455732 RSG1Q9BU20 258 aa12.67□□□□□ -0.38
USP39-208ENST00000455732 HLA-DRB4X5D2U9 266 aa12.67□□□□□ -0.38
USP39-208ENST00000455732 ELOA3CA0A087WX78 387 aaPredicted RBP12.66□□□□□ -0.38
USP39-208ENST00000455732 PET100P0DJ07 73 aa12.66□□□□□ -0.38
USP39-208ENST00000455732 C4BPBP20851 252 aa12.66□□□□□ -0.38
USP39-208ENST00000455732 SAV1Q9H4B6 383 aaPredicted RBP12.66□□□□□ -0.38
USP39-208ENST00000455732 ALG5Q9Y673 324 aa12.66□□□□□ -0.38
USP39-208ENST00000455732 A0A087X0K7 114 aa12.65□□□□□ -0.38
USP39-208ENST00000455732 A0A0J9YWU9 116 aa12.65□□□□□ -0.38
USP39-208ENST00000455732 COX7A2P2O60397 106 aa12.65□□□□□ -0.38
USP39-208ENST00000455732 MPDU1O75352 247 aa12.65□□□□□ -0.38
USP39-208ENST00000455732 MPC2O95563 127 aa12.65□□□□□ -0.38
USP39-208ENST00000455732 RPL29P47914 159 aaKnown RBP12.65□□□□□ -0.38
USP39-208ENST00000455732 OPCMLQ14982 345 aa12.65□□□□□ -0.38
USP39-208ENST00000455732 SPATA31B1PQ5VZV4 182 aa12.65□□□□□ -0.38
USP39-208ENST00000455732 LINC00305Q7Z4B0 112 aa12.65□□□□□ -0.38
USP39-208ENST00000455732 TMEM37Q8WXS4 190 aa12.65□□□□□ -0.38
USP39-208ENST00000455732 C16orf92Q96LL3 132 aa12.65□□□□□ -0.38
USP39-208ENST00000455732 LINC00052Q96N35 136 aa12.65□□□□□ -0.38
USP39-208ENST00000455732 CLUHP3Q96NS8 147 aa12.65□□□□□ -0.38
USP39-208ENST00000455732 MRPS12O15235 138 aaKnown RBP12.64□□□□□ -0.39
USP39-208ENST00000455732 NUTF2P61970 127 aaKnown RBP12.64□□□□□ -0.39
USP39-208ENST00000455732 NHLH2Q02577 135 aa12.64□□□□□ -0.39
USP39-208ENST00000455732 MIC13Q5XKP0 118 aa12.64□□□□□ -0.39
USP39-208ENST00000455732 Q6ZRG5 221 aa12.64□□□□□ -0.39
USP39-208ENST00000455732 OR5C1Q8NGR4 320 aa12.64□□□□□ -0.39
USP39-208ENST00000455732 RARRES2Q99969 163 aa12.64□□□□□ -0.39
USP39-208ENST00000455732 RNF126Q9BV68 326 aa12.64□□□□□ -0.39
USP39-208ENST00000455732 FGF7P21781 194 aa12.63□□□□□ -0.39
USP39-208ENST00000455732 B2MP61769 119 aa12.63□□□□□ -0.39
USP39-208ENST00000455732 GDF5OSQ5U4N7 250 aa12.63□□□□□ -0.39
USP39-208ENST00000455732 C10orf113Q5VZT2 155 aa12.63□□□□□ -0.39
USP39-208ENST00000455732 OR1L4Q8NGR5 311 aa12.63□□□□□ -0.39
USP39-208ENST00000455732 OR11H2Q8NH07 326 aa12.63□□□□□ -0.39
USP39-208ENST00000455732 C20orf173Q96LM9 149 aa12.63□□□□□ -0.39
USP39-208ENST00000455732 C1QTNF4Q9BXJ3 329 aa12.63□□□□□ -0.39
USP39-208ENST00000455732 C11orf68Q9H3H3 251 aaKnown RBP12.63□□□□□ -0.39
USP39-208ENST00000455732 RPRMQ9NS64 109 aa12.63□□□□□ -0.39
USP39-208ENST00000455732 TRAV8-2A0A0B4J237 113 aa12.62□□□□□ -0.39
USP39-208ENST00000455732 CXCL2P19875 107 aa12.62□□□□□ -0.39
USP39-208ENST00000455732 CSNK1G2-AS1Q8NCQ2 148 aa12.62□□□□□ -0.39
USP39-208ENST00000455732 PFDN5Q99471 154 aa12.62□□□□□ -0.39
USP39-208ENST00000455732 NPCDR1Q9BY65 106 aa12.62□□□□□ -0.39
USP39-208ENST00000455732 DNAJC4Q9NNZ3 241 aa12.62□□□□□ -0.39
USP39-208ENST00000455732 SLC39A9Q9NUM3 307 aa12.62□□□□□ -0.39
USP39-208ENST00000455732 PXMP4Q9Y6I8 212 aa12.62□□□□□ -0.39
USP39-208ENST00000455732 PLECQ15149 4684 aaKnown RBP12.61□□□□□ -0.39
USP39-208ENST00000455732 A0A0J9YX75 114 aa12.61□□□□□ -0.39
USP39-208ENST00000455732 A8MTW9 85 aa12.61□□□□□ -0.39
USP39-208ENST00000455732 ZNF705EA8MWA4 302 aaPredicted RBP12.61□□□□□ -0.39
USP39-208ENST00000455732 CXCL3P19876 107 aa12.61□□□□□ -0.39
USP39-208ENST00000455732 DEFB1P60022 68 aa12.61□□□□□ -0.39
USP39-208ENST00000455732 BPIFA4PQ86YQ2 179 aa12.61□□□□□ -0.39
USP39-208ENST00000455732 MBD2Q9UBB5 411 aa12.61□□□□□ -0.39
USP39-208ENST00000455732 DNAH1Q9P2D7 4330 aa12.61□□□□□ -0.39
USP39-208ENST00000455732 CLINT1Q14677 625 aa12.6□□□□□ -0.39
USP39-208ENST00000455732 MORN5Q5VZ52 161 aa12.6□□□□□ -0.39
USP39-208ENST00000455732 EBLN2Q6P2I7 272 aa12.6□□□□□ -0.39
USP39-208ENST00000455732 HSPB11Q9Y547 144 aa12.6□□□□□ -0.39
USP39-208ENST00000455732 F6UB75 175 aa12.59□□□□□ -0.39
USP39-208ENST00000455732 FGL1Q08830 312 aa12.59□□□□□ -0.39
USP39-208ENST00000455732 RGS21Q2M5E4 152 aa12.59□□□□□ -0.39
USP39-208ENST00000455732 LCN15Q6UWW0 184 aa12.59□□□□□ -0.39
USP39-208ENST00000455732 ZNF709Q8N972 641 aa12.59□□□□□ -0.39
USP39-208ENST00000455732 Q8NAQ8 132 aa12.59□□□□□ -0.39
USP39-208ENST00000455732 OR11H7Q8NGC8 314 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms