RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 RBKSQ9H477 322 aa16.02■□□□□ 0.16
PTPRA-208ENST00000455631 MTFP1Q9UDX5 166 aa16.02■□□□□ 0.16
PTPRA-208ENST00000455631 ZNF98A6NK75 572 aa16.01■□□□□ 0.15
PTPRA-208ENST00000455631 RHOBP62745 196 aa16.01■□□□□ 0.15
PTPRA-208ENST00000455631 FGL1Q08830 312 aa16.01■□□□□ 0.15
PTPRA-208ENST00000455631 CDPF1Q6NVV7 123 aa16.01■□□□□ 0.15
PTPRA-208ENST00000455631 Q6ZRN7 208 aaPredicted RBP16.01■□□□□ 0.15
PTPRA-208ENST00000455631 OR1B1Q8NGR6 318 aa16.01■□□□□ 0.15
PTPRA-208ENST00000455631 PPP1R14DQ9NXH3 145 aa16.01■□□□□ 0.15
PTPRA-208ENST00000455631 HSPB7Q9UBY9 170 aa16.01■□□□□ 0.15
PTPRA-208ENST00000455631 TRAV8-2A0A0B4J237 113 aa16■□□□□ 0.15
PTPRA-208ENST00000455631 ZNF701M0R085 212 aaPredicted RBP16■□□□□ 0.15
PTPRA-208ENST00000455631 TAS2R19P59542 299 aa16■□□□□ 0.15
PTPRA-208ENST00000455631 ERVFC1-1P60608 527 aa16■□□□□ 0.15
PTPRA-208ENST00000455631 HIST1H1AQ02539 215 aaPredicted RBP16■□□□□ 0.15
PTPRA-208ENST00000455631 GPR107Q5VW38 600 aa16■□□□□ 0.15
PTPRA-208ENST00000455631 FAAP20Q6NZ36 180 aa16■□□□□ 0.15
PTPRA-208ENST00000455631 RNASE8Q8TDE3 154 aaKnown RBP16■□□□□ 0.15
PTPRA-208ENST00000455631 YIPF6Q96EC8 236 aa16■□□□□ 0.15
PTPRA-208ENST00000455631 PRR13Q9NZ81 148 aa16■□□□□ 0.15
PTPRA-208ENST00000455631 TMEM56-RWDD3S4R434 201 aa16■□□□□ 0.15
PTPRA-208ENST00000455631 CRYM-AS1A6NIL9 109 aa15.99■□□□□ 0.15
PTPRA-208ENST00000455631 ZNF493Q6ZR52 646 aa15.99■□□□□ 0.15
PTPRA-208ENST00000455631 TMEM229BQ8NBD8 167 aa15.99■□□□□ 0.15
PTPRA-208ENST00000455631 TMEM263Q8WUH6 116 aaKnown RBP15.99■□□□□ 0.15
PTPRA-208ENST00000455631 IGKV1OR2-108A0A075B7D4 117 aa15.98■□□□□ 0.15
PTPRA-208ENST00000455631 ADAP1O75689 374 aa15.98■□□□□ 0.15
PTPRA-208ENST00000455631 HOXA5P20719 270 aa15.98■□□□□ 0.15
PTPRA-208ENST00000455631 STEAP1BQ6NZ63 245 aa15.98■□□□□ 0.15
PTPRA-208ENST00000455631 OR4D5Q8NGN0 318 aa15.98■□□□□ 0.15
PTPRA-208ENST00000455631 GPR82Q96P67 336 aa15.98■□□□□ 0.15
PTPRA-208ENST00000455631 MDFICQ9P1T7 246 aa15.98■□□□□ 0.15
PTPRA-208ENST00000455631 SLC45A2Q9UMX9 530 aa15.98■□□□□ 0.15
PTPRA-208ENST00000455631 CFDP00746 253 aaPredicted RBP15.97■□□□□ 0.15
PTPRA-208ENST00000455631 ORM2P19652 201 aa15.97■□□□□ 0.15
PTPRA-208ENST00000455631 CCR6P51684 374 aa15.97■□□□□ 0.15
PTPRA-208ENST00000455631 ATP5IP56385 69 aaPredicted RBP15.97■□□□□ 0.15
PTPRA-208ENST00000455631 SMCO1Q147U7 214 aa15.97■□□□□ 0.15
PTPRA-208ENST00000455631 GGNBP1Q5YKI7 109 aa15.97■□□□□ 0.15
PTPRA-208ENST00000455631 IFNA5P01569 189 aa15.96■□□□□ 0.15
PTPRA-208ENST00000455631 SMR3BP02814 79 aaPredicted RBP15.96■□□□□ 0.15
PTPRA-208ENST00000455631 KRTAP10-1P60331 282 aa15.96■□□□□ 0.15
PTPRA-208ENST00000455631 NCS1P62166 190 aa15.96■□□□□ 0.15
PTPRA-208ENST00000455631 SURF2Q15527 256 aaPredicted RBP15.96■□□□□ 0.15
PTPRA-208ENST00000455631 THAP8Q8NA92 274 aa15.96■□□□□ 0.15
PTPRA-208ENST00000455631 IL22RA2Q969J5 263 aa15.96■□□□□ 0.15
PTPRA-208ENST00000455631 TMEM147Q9BVK8 224 aa15.96■□□□□ 0.15
PTPRA-208ENST00000455631 EXTL2Q9UBQ6 330 aa15.96■□□□□ 0.15
PTPRA-208ENST00000455631 PAIP2BQ9ULR5 123 aaKnown RBP15.96■□□□□ 0.15
PTPRA-208ENST00000455631 GAGE12BA1L429 117 aa15.95■□□□□ 0.14
PTPRA-208ENST00000455631 H3BNG1 76 aa15.95■□□□□ 0.14
PTPRA-208ENST00000455631 GAGE7O76087 117 aa15.95■□□□□ 0.14
PTPRA-208ENST00000455631 GAGE12FP0CL80 117 aa15.95■□□□□ 0.14
PTPRA-208ENST00000455631 GAGE12GP0CL81 117 aa15.95■□□□□ 0.14
PTPRA-208ENST00000455631 GAGE12IP0CL82 117 aa15.95■□□□□ 0.14
PTPRA-208ENST00000455631 LINC00612Q8N6U2 182 aa15.95■□□□□ 0.14
PTPRA-208ENST00000455631 OR8A1Q8NGG7 326 aa15.95■□□□□ 0.14
PTPRA-208ENST00000455631 VPS13BQ7Z7G8 4022 aa15.94■□□□□ 0.14
PTPRA-208ENST00000455631 J3QL48 77 aa15.94■□□□□ 0.14
PTPRA-208ENST00000455631 PRB4P10163 310 aaPredicted RBP15.94■□□□□ 0.14
PTPRA-208ENST00000455631 GATA2P23769 480 aaPredicted RBP15.94■□□□□ 0.14
PTPRA-208ENST00000455631 RAB11AP62491 216 aa15.94■□□□□ 0.14
PTPRA-208ENST00000455631 ICAM4Q14773 271 aa15.94■□□□□ 0.14
PTPRA-208ENST00000455631 H7BYZ3 331 aa15.93■□□□□ 0.14
PTPRA-208ENST00000455631 RLN2P04090 185 aa15.93■□□□□ 0.14
PTPRA-208ENST00000455631 S100A7P31151 101 aa15.93■□□□□ 0.14
PTPRA-208ENST00000455631 CDKN1BP46527 198 aa15.93■□□□□ 0.14
PTPRA-208ENST00000455631 BPIFCQ8NFQ6 507 aa15.93■□□□□ 0.14
PTPRA-208ENST00000455631 OR1S1Q8NH92 325 aa15.93■□□□□ 0.14
PTPRA-208ENST00000455631 DNAH10OSP0CZ25 163 aa15.92■□□□□ 0.14
PTPRA-208ENST00000455631 VBP1P61758 197 aa15.92■□□□□ 0.14
PTPRA-208ENST00000455631 MZT2AQ6P582 158 aa15.92■□□□□ 0.14
PTPRA-208ENST00000455631 LYZL2Q7Z4W2 148 aa15.92■□□□□ 0.14
PTPRA-208ENST00000455631 GPR132Q9UNW8 380 aa15.92■□□□□ 0.14
PTPRA-208ENST00000455631 A0A0B4J2A0 478 aa15.91■□□□□ 0.14
PTPRA-208ENST00000455631 DISC1C4P0D8 188 aa15.91■□□□□ 0.14
PTPRA-208ENST00000455631 SIVA1O15304 175 aa15.91■□□□□ 0.14
PTPRA-208ENST00000455631 IAPPP10997 89 aa15.91■□□□□ 0.14
PTPRA-208ENST00000455631 TMEM182Q6ZP80 229 aaPredicted RBP15.91■□□□□ 0.14
PTPRA-208ENST00000455631 TMPRSS5Q9H3S3 457 aa15.91■□□□□ 0.14
PTPRA-208ENST00000455631 SHPKQ9UHJ6 478 aa15.91■□□□□ 0.14
PTPRA-208ENST00000455631 KCNIP3Q9Y2W7 256 aa15.91■□□□□ 0.14
PTPRA-208ENST00000455631 FAM229AH3BQW9 127 aa15.9■□□□□ 0.14
PTPRA-208ENST00000455631 AKR1C4P17516 323 aa15.9■□□□□ 0.14
PTPRA-208ENST00000455631 CXCL3P19876 107 aa15.9■□□□□ 0.14
PTPRA-208ENST00000455631 Q6ZSN1 163 aa15.9■□□□□ 0.14
PTPRA-208ENST00000455631 CCDC28AQ8IWP9 274 aa15.9■□□□□ 0.14
PTPRA-208ENST00000455631 VCX3AQ9NNX9 186 aa15.9■□□□□ 0.14
PTPRA-208ENST00000455631 A0A096LPF7 62 aa15.89■□□□□ 0.13
PTPRA-208ENST00000455631 SNURFLB1AK76 121 aa15.89■□□□□ 0.13
PTPRA-208ENST00000455631 H3BRN7 92 aa15.89■□□□□ 0.13
PTPRA-208ENST00000455631 HAMPP81172 84 aa15.89■□□□□ 0.13
PTPRA-208ENST00000455631 C15orf40Q8WUR7 153 aa15.89■□□□□ 0.13
PTPRA-208ENST00000455631 TNFRSF18Q9Y5U5 241 aa15.89■□□□□ 0.13
PTPRA-208ENST00000455631 RPL7P18124 248 aaKnown RBP15.88■□□□□ 0.13
PTPRA-208ENST00000455631 KIR3DS1Q14943 382 aa15.88■□□□□ 0.13
PTPRA-208ENST00000455631 PSG3Q16557 428 aa15.88■□□□□ 0.13
PTPRA-208ENST00000455631 A0A087WTM6 91 aa15.87■□□□□ 0.13
PTPRA-208ENST00000455631 AKR1C1Q04828 323 aa15.87■□□□□ 0.13
PTPRA-208ENST00000455631 LRRC20Q8TCA0 184 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms