RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 OR1L4Q8NGR5 311 aa12.13□□□□□ -0.47
SF3A1-204ENST00000447376 DCANP1Q8TF63 244 aa12.13□□□□□ -0.47
SF3A1-204ENST00000447376 AQP10Q96PS8 301 aa12.13□□□□□ -0.47
SF3A1-204ENST00000447376 PFDN5Q99471 154 aa12.13□□□□□ -0.47
SF3A1-204ENST00000447376 SLC25A22Q9H936 323 aa12.13□□□□□ -0.47
SF3A1-204ENST00000447376 SEPSECSQ9HD40 501 aaKnown RBP12.13□□□□□ -0.47
SF3A1-204ENST00000447376 RETNQ9HD89 108 aa12.13□□□□□ -0.47
SF3A1-204ENST00000447376 FXYD6-FXYD2A0A087WZ82 144 aa12.12□□□□□ -0.47
SF3A1-204ENST00000447376 MEOX2P50222 304 aa12.12□□□□□ -0.47
SF3A1-204ENST00000447376 B2MP61769 119 aa12.12□□□□□ -0.47
SF3A1-204ENST00000447376 LEMD1Q68G75 181 aa12.12□□□□□ -0.47
SF3A1-204ENST00000447376 SHANK2-AS3Q9BTD1 123 aa12.12□□□□□ -0.47
SF3A1-204ENST00000447376 NPCDR1Q9BY65 106 aa12.12□□□□□ -0.47
SF3A1-204ENST00000447376 SLC25A39Q9BZJ4 359 aaPredicted RBP12.12□□□□□ -0.47
SF3A1-204ENST00000447376 SMIM3Q9BZL3 60 aa12.12□□□□□ -0.47
SF3A1-204ENST00000447376 WDR61Q9GZS3 305 aaKnown RBP12.12□□□□□ -0.47
SF3A1-204ENST00000447376 CSTL1Q9H114 145 aa12.12□□□□□ -0.47
SF3A1-204ENST00000447376 ARV1Q9H2C2 271 aa12.12□□□□□ -0.47
SF3A1-204ENST00000447376 DNAJC4Q9NNZ3 241 aa12.12□□□□□ -0.47
SF3A1-204ENST00000447376 SLC39A9Q9NUM3 307 aa12.12□□□□□ -0.47
SF3A1-204ENST00000447376 PXMP4Q9Y6I8 212 aa12.12□□□□□ -0.47
SF3A1-204ENST00000447376 C3orf84H3BNL1 204 aa12.11□□□□□ -0.47
SF3A1-204ENST00000447376 PRR20EP86478 221 aa12.11□□□□□ -0.47
SF3A1-204ENST00000447376 PRR20CP86479 221 aa12.11□□□□□ -0.47
SF3A1-204ENST00000447376 PRR20DP86480 221 aa12.11□□□□□ -0.47
SF3A1-204ENST00000447376 PRR20BP86481 221 aa12.11□□□□□ -0.47
SF3A1-204ENST00000447376 PRR20AP86496 221 aa12.11□□□□□ -0.47
SF3A1-204ENST00000447376 ZNF124Q15973 351 aa12.11□□□□□ -0.47
SF3A1-204ENST00000447376 Q5BKY6 102 aa12.11□□□□□ -0.47
SF3A1-204ENST00000447376 PSMG4Q5JS54 123 aa12.11□□□□□ -0.47
SF3A1-204ENST00000447376 C10orf113Q5VZT2 155 aa12.11□□□□□ -0.47
SF3A1-204ENST00000447376 MIC13Q5XKP0 118 aa12.11□□□□□ -0.47
SF3A1-204ENST00000447376 Q6ZNX1 250 aa12.11□□□□□ -0.47
SF3A1-204ENST00000447376 MUC7Q8TAX7 377 aa12.11□□□□□ -0.47
SF3A1-204ENST00000447376 TP53TG1Q9Y2A0 90 aa12.11□□□□□ -0.47
SF3A1-204ENST00000447376 H3BRN7 92 aa12.1□□□□□ -0.47
SF3A1-204ENST00000447376 SPRY2O43597 315 aa12.1□□□□□ -0.47
SF3A1-204ENST00000447376 RPL7P18124 248 aaKnown RBP12.1□□□□□ -0.47
SF3A1-204ENST00000447376 ZNF266Q14584 549 aa12.1□□□□□ -0.47
SF3A1-204ENST00000447376 DEFB135Q30KP9 77 aa12.1□□□□□ -0.47
SF3A1-204ENST00000447376 LINC00305Q7Z4B0 112 aa12.1□□□□□ -0.47
SF3A1-204ENST00000447376 FAM24BQ8N5W8 94 aa12.1□□□□□ -0.47
SF3A1-204ENST00000447376 IL17DQ8TAD2 202 aa12.1□□□□□ -0.47
SF3A1-204ENST00000447376 NUTF2P61970 127 aaKnown RBP12.09□□□□□ -0.47
SF3A1-204ENST00000447376 TMEM41BQ5BJD5 291 aa12.09□□□□□ -0.47
SF3A1-204ENST00000447376 PATE2Q6UY27 113 aa12.09□□□□□ -0.47
SF3A1-204ENST00000447376 GATAD1Q8WUU5 269 aa12.09□□□□□ -0.47
SF3A1-204ENST00000447376 UHRF2Q96PU4 802 aa12.09□□□□□ -0.47
SF3A1-204ENST00000447376 SCRT1Q9BWW7 348 aa12.09□□□□□ -0.47
SF3A1-204ENST00000447376 PARD6GQ9BYG4 376 aaPredicted RBP12.09□□□□□ -0.47
SF3A1-204ENST00000447376 TNFSF18Q9UNG2 199 aa12.09□□□□□ -0.47
SF3A1-204ENST00000447376 CA1P00915 261 aaPredicted RBP12.08□□□□□ -0.48
SF3A1-204ENST00000447376 SPP1P10451 314 aa12.08□□□□□ -0.48
SF3A1-204ENST00000447376 ATF4P18848 351 aaPredicted RBP12.08□□□□□ -0.48
SF3A1-204ENST00000447376 PSMB3P49720 205 aa12.08□□□□□ -0.48
SF3A1-204ENST00000447376 ACTL10Q5JWF8 245 aa12.08□□□□□ -0.48
SF3A1-204ENST00000447376 MORN3Q6PF18 240 aaPredicted RBP12.08□□□□□ -0.48
SF3A1-204ENST00000447376 OVOL2Q9BRP0 275 aa12.08□□□□□ -0.48
SF3A1-204ENST00000447376 SLC25A32Q9H2D1 315 aa12.08□□□□□ -0.48
SF3A1-204ENST00000447376 ISLRO14498 428 aa12.07□□□□□ -0.48
SF3A1-204ENST00000447376 TMEM37Q8WXS4 190 aa12.07□□□□□ -0.48
SF3A1-204ENST00000447376 RNF183Q96D59 192 aa12.07□□□□□ -0.48
SF3A1-204ENST00000447376 C16orf92Q96LL3 132 aa12.07□□□□□ -0.48
SF3A1-204ENST00000447376 LINC00052Q96N35 136 aa12.07□□□□□ -0.48
SF3A1-204ENST00000447376 RSG1Q9BU20 258 aa12.07□□□□□ -0.48
SF3A1-204ENST00000447376 STAB2Q8WWQ8 2551 aa12.06□□□□□ -0.48
SF3A1-204ENST00000447376 ARPC5O15511 151 aa12.06□□□□□ -0.48
SF3A1-204ENST00000447376 BPIFA4PQ86YQ2 179 aa12.06□□□□□ -0.48
SF3A1-204ENST00000447376 LRRC20Q8TCA0 184 aa12.06□□□□□ -0.48
SF3A1-204ENST00000447376 EDA2RQ9HAV5 297 aa12.06□□□□□ -0.48
SF3A1-204ENST00000447376 WFDC1Q9HC57 220 aa12.06□□□□□ -0.48
SF3A1-204ENST00000447376 HUWE1Q7Z6Z7 4374 aaKnown RBP12.05□□□□□ -0.48
SF3A1-204ENST00000447376 BORCS7-ASMTA0A0B4J1R7 106 aa12.05□□□□□ -0.48
SF3A1-204ENST00000447376 RNF222A6NCQ9 220 aa12.05□□□□□ -0.48
SF3A1-204ENST00000447376 KNCNA6PVL3 124 aa12.05□□□□□ -0.48
SF3A1-204ENST00000447376 TAAR5O14804 337 aa12.05□□□□□ -0.48
SF3A1-204ENST00000447376 SPATA31B1PQ5VZV4 182 aa12.05□□□□□ -0.48
SF3A1-204ENST00000447376 EBLN2Q6P2I7 272 aa12.05□□□□□ -0.48
SF3A1-204ENST00000447376 TRPT1Q86TN4 253 aaKnown RBP12.05□□□□□ -0.48
SF3A1-204ENST00000447376 C1QTNF4Q9BXJ3 329 aa12.05□□□□□ -0.48
SF3A1-204ENST00000447376 MFFQ9GZY8 342 aa12.05□□□□□ -0.48
SF3A1-204ENST00000447376 RPRMQ9NS64 109 aa12.05□□□□□ -0.48
SF3A1-204ENST00000447376 HMSDA8MTL9 139 aa12.04□□□□□ -0.48
SF3A1-204ENST00000447376 G3V3Q6 166 aa12.04□□□□□ -0.48
SF3A1-204ENST00000447376 SMLR1H3BR10 107 aa12.04□□□□□ -0.48
SF3A1-204ENST00000447376 FFAR4Q5NUL3 377 aa12.04□□□□□ -0.48
SF3A1-204ENST00000447376 RARRES2Q99969 163 aa12.04□□□□□ -0.48
SF3A1-204ENST00000447376 TIMM9Q9Y5J7 89 aa12.04□□□□□ -0.48
SF3A1-204ENST00000447376 FAM78BQ5VT40 261 aa12.03□□□□□ -0.48
SF3A1-204ENST00000447376 FOXI2Q6ZQN5 318 aa12.03□□□□□ -0.48
SF3A1-204ENST00000447376 MRPL32Q9BYC8 188 aaKnown RBP12.03□□□□□ -0.48
SF3A1-204ENST00000447376 NBEAL2Q6ZNJ1 2754 aa12.03□□□□□ -0.48
SF3A1-204ENST00000447376 TENM3Q9P273 2699 aa12.03□□□□□ -0.48
SF3A1-204ENST00000447376 hCG_2014768A0A024R1R8 64 aa12.02□□□□□ -0.49
SF3A1-204ENST00000447376 A0A087X0K7 114 aa12.02□□□□□ -0.49
SF3A1-204ENST00000447376 JTBO76095 146 aa12.02□□□□□ -0.49
SF3A1-204ENST00000447376 HLA-DRB4P13762 266 aa12.02□□□□□ -0.49
SF3A1-204ENST00000447376 ZNF345Q14585 488 aa12.02□□□□□ -0.49
SF3A1-204ENST00000447376 ACOT6Q3I5F7 207 aaPredicted RBP12.02□□□□□ -0.49
SF3A1-204ENST00000447376 GNPNAT1Q96EK6 184 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms