RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 YAE1D1Q9NRH1 226 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 ZNF586Q9NXT0 402 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 LINC00527Q9UJ94 153 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 PLXNB1O43157 2135 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 A0A1W2PPQ1 181 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 LINC01548A6NM66 108 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 F8W735 103 aaPredicted RBP4.69□□□□□ -1.66
VPS50-205ENST00000441602 CD5LO43866 347 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 CT45A10P0DMU9 189 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 ADMP35318 185 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 MYCNOSP40205 109 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 FAM3BP58499 235 aaPredicted RBP4.69□□□□□ -1.66
VPS50-205ENST00000441602 CCDC140Q96MF4 163 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 SAV1Q9H4B6 383 aaPredicted RBP4.69□□□□□ -1.66
VPS50-205ENST00000441602 ZFP30Q9Y2G7 519 aa4.69□□□□□ -1.66
VPS50-205ENST00000441602 DSPP15924 2871 aaKnown RBP4.68□□□□□ -1.66
VPS50-205ENST00000441602 LOC400499M0QZD8 3231 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 ZNF705GA8MUZ8 300 aaPredicted RBP4.68□□□□□ -1.66
VPS50-205ENST00000441602 PFN1P07737 140 aaKnown RBP4.68□□□□□ -1.66
VPS50-205ENST00000441602 IGLC2P0DOY2 106 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 PPIFP30405 207 aaKnown RBP4.68□□□□□ -1.66
VPS50-205ENST00000441602 BLCAPP62952 87 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 FOXL1Q12952 345 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 FOXE3Q13461 319 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 IBA57Q5T440 356 aaKnown RBP4.68□□□□□ -1.66
VPS50-205ENST00000441602 FAM231DQ6ZW35 169 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 OR4X2Q8NGF9 303 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 ZNF414Q96IQ9 312 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 KLF12Q9Y4X4 402 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 A0A087X0K7 114 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 ZNF320A2RRD8 509 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 IGHG4P01861 327 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 GNG5P63218 68 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 WDR73Q6P4I2 378 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 GOLT1AQ6ZVE7 132 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 TMEM75Q8N9X5 138 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 WFDC11Q8NEX6 87 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 OR4B1Q8NGF8 309 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 PYGO2Q9BRQ0 406 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 ZNF492Q9P255 531 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 PEF1Q9UBV8 284 aaKnown RBP4.68□□□□□ -1.66
VPS50-205ENST00000441602 UFC1Q9Y3C8 167 aa4.68□□□□□ -1.66
VPS50-205ENST00000441602 SOX21Q9Y651 276 aaPredicted RBP4.68□□□□□ -1.66
VPS50-205ENST00000441602 TGIF2-C20orf24A0A0A6YYL0 155 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 H3BTX0 84 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 M0QZ24 198 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 HOXA3O43365 443 aaPredicted RBP4.67□□□□□ -1.66
VPS50-205ENST00000441602 IGLV1-40P01703 118 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 SAPCD1Q5SSQ6 148 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 GBGT1Q8N5D6 347 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 SIGLECL1Q8N7X8 197 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 MRPL53Q96EL3 112 aaKnown RBP4.67□□□□□ -1.66
VPS50-205ENST00000441602 IGF2BP2-AS1Q96M15 143 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 NOL4LQ96MY1 436 aaPredicted RBP4.67□□□□□ -1.66
VPS50-205ENST00000441602 ZFAND3Q9H8U3 227 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 AURKAIP1Q9NWT8 199 aaPredicted RBP4.67□□□□□ -1.66
VPS50-205ENST00000441602 ZFYVE26Q68DK2 2539 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 MYO18BQ8IUG5 2567 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 SPG11Q96JI7 2443 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 TYMSP04818 313 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 SIGLEC15Q6ZMC9 328 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 Q86TA4 180 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 KRTAP1-3Q8IUG1 177 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 ZNF418Q8TF45 676 aaPredicted RBP4.67□□□□□ -1.66
VPS50-205ENST00000441602 YPEL4Q96NS1 127 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 JMJD8Q96S16 334 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 USP9XQ93008 2570 aaPredicted RBP4.67□□□□□ -1.66
VPS50-205ENST00000441602 TRBV20OR9-2A0A075B6H5 130 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 TRAV34A0A0B4J273 112 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 IGHV3-35A0A0C4DH35 117 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 XKRY2A2RUG3 117 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 PGPEP1LA6NFU8 196 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 A8MWL6 223 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 P01737 135 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 IGHV3-11P01762 117 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 MT-ND6P03923 174 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 PRNTQ86SH4 94 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 PSG8Q9UQ74 426 aa4.67□□□□□ -1.66
VPS50-205ENST00000441602 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.67□□□□□ -1.662e-6■■■■□ 23.8
VPS50-205ENST00000441602 EPG5Q9HCE0 2579 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 K7EMT4 169 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 SNRPCP09234 159 aaKnown RBP4.66□□□□□ -1.66
VPS50-205ENST00000441602 CXCL1P09341 107 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 RPL15P61313 204 aaKnown RBP4.66□□□□□ -1.66
VPS50-205ENST00000441602 PRR27Q6MZM9 219 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 TMEM183AQ8IXX5 376 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 EXOC3-AS1Q8N2X6 119 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 BORCS7Q96B45 105 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 ZNF331Q9NQX6 463 aaPredicted RBP4.66□□□□□ -1.66
VPS50-205ENST00000441602 DIRC3C9JPN6 131 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 MRPS12O15235 138 aaKnown RBP4.66□□□□□ -1.66
VPS50-205ENST00000441602 BUB3O43684 328 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 S100A8P05109 93 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 PSG3Q16557 428 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 CT83Q5H943 113 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 HIST2H2BCQ6DN03 193 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 ZFP82Q8N141 532 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 PRRC2AP48634 2157 aaKnown RBP4.66□□□□□ -1.66
VPS50-205ENST00000441602 LTAP01374 205 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 ID1P41134 155 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms