RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 CFDP00746 253 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 IGKV3-20P01619 116 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 CXCL3P19876 107 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 S100A11P31949 105 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 CAMLGP49069 296 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 SULT1A1P50225 295 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 APOC4P55056 127 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 RAP2BP61225 183 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 BAXQ07812 192 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 DEFB135Q30KP9 77 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 ACTL10Q5JWF8 245 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 MIC13Q5XKP0 118 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 PATE2Q6UY27 113 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 STX12Q86Y82 276 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 STHQ8IWL8 128 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 PPP1R1CQ8WVI7 109 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 UHRF2Q96PU4 802 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 MGST2Q99735 147 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 OVOL2Q9BRP0 275 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 RNF126Q9BV68 326 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 SCRT1Q9BWW7 348 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 SLC25A39Q9BZJ4 359 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 CSTL1Q9H114 145 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 SLC25A32Q9H2D1 315 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 NRN1Q9NPD7 142 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 FBXL17Q9UF56 701 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 HIGD1AQ9Y241 93 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 AGRNO00468 2067 aa4.25□□□□□ -1.73
HMGB3P24-201ENST00000433260 TRAV2A0A0B4J234 112 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 TRAV5A0A0B4J249 113 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 UBE2L5PA0A1B0GUS4 154 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 H3BTX0 84 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 MPC2O95563 127 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 PTTG1O95997 202 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 FGF7P21781 194 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 ID1P41134 155 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 FXYD7P58549 80 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 SNRPD3P62318 126 aaKnown RBP4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 SELENOTP62341 195 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 HBG1P69891 147 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 HBG2P69892 147 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 EWSR1Q01844 656 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 RAB31Q13636 194 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 CLINT1Q14677 625 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 FCN2Q15485 313 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 ATP6V1FQ16864 119 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 RGS21Q2M5E4 152 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 CT83Q5H943 113 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 C10orf113Q5VZT2 155 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 ZFAND6Q6FIF0 208 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 Q6ZRG5 221 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 LINC00305Q7Z4B0 112 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 OR4B1Q8NGF8 309 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 OR5C1Q8NGR4 320 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 THAP6Q8TBB0 222 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 LRRC20Q8TCA0 184 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 TMEM37Q8WXS4 190 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 GGACTQ9BVM4 153 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 SMIM3Q9BZL3 60 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 SLC25A31Q9H0C2 315 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 MED28Q9H204 178 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 ARV1Q9H2C2 271 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 UQCC1Q9NVA1 299 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 CLEC5AQ9NY25 188 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 SLC45A2Q9UMX9 530 aa4.24□□□□□ -1.73
HMGB3P24-201ENST00000433260 FNDC10F2Z333 226 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 F6UB75 175 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 H3BRN7 92 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 UBE2CO00762 179 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 COX7A2P2O60397 106 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 CA1P00915 261 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 ZNF705DP0CH99 300 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 ZNF705BP0CI00 300 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 HLA-DMBP28068 263 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 RPL12P30050 165 aaKnown RBP4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 S100A7P31151 101 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 NUP62P37198 522 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 GALR1P47211 349 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 PLP1P60201 277 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 VWC2Q2TAL6 325 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 C1orf194Q5T5A4 169 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 GDF5OSQ5U4N7 250 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 MORN5Q5VZ52 161 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 TRPT1Q86TN4 253 aaKnown RBP4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 ZNF546Q86UE3 836 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 RNF182Q8N6D2 247 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 NUDT10Q8NFP7 164 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 OR11H7Q8NGC8 314 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 RNF183Q96D59 192 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 NUDT11Q96G61 164 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 C20orf173Q96LM9 149 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 C17orf77Q96MU5 243 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 RARRES2Q99969 163 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 SHANK2-AS3Q9BTD1 123 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 EDA2RQ9HAV5 297 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 DNAJC4Q9NNZ3 241 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 WDR83OSQ9Y284 106 aa4.23□□□□□ -1.73
HMGB3P24-201ENST00000433260 KIR2DL5BA0A0G2JN68 375 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms