RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 MFFQ9GZY8 342 aa12.53□□□□□ -0.4
UBE3D-204ENST00000430071 SLC39A9Q9NUM3 307 aa12.53□□□□□ -0.4
UBE3D-204ENST00000430071 HIGD1AQ9Y241 93 aa12.53□□□□□ -0.4
UBE3D-204ENST00000430071 HYDINQ4G0P3 5121 aa12.52□□□□□ -0.4
UBE3D-204ENST00000430071 HMSDA8MTL9 139 aa12.52□□□□□ -0.41
UBE3D-204ENST00000430071 TFPI2P48307 235 aa12.52□□□□□ -0.41
UBE3D-204ENST00000430071 B2MP61769 119 aa12.52□□□□□ -0.41
UBE3D-204ENST00000430071 CD300CQ08708 224 aa12.52□□□□□ -0.41
UBE3D-204ENST00000430071 PXDC1Q5TGL8 231 aa12.52□□□□□ -0.41
UBE3D-204ENST00000430071 LEMD1Q68G75 181 aa12.52□□□□□ -0.41
UBE3D-204ENST00000430071 APRG1Q8IVJ8 170 aa12.52□□□□□ -0.41
UBE3D-204ENST00000430071 GBGT1Q8N5D6 347 aa12.52□□□□□ -0.41
UBE3D-204ENST00000430071 TMEM37Q8WXS4 190 aa12.52□□□□□ -0.41
UBE3D-204ENST00000430071 PPP1R14BQ96C90 147 aa12.52□□□□□ -0.41
UBE3D-204ENST00000430071 RSG1Q9BU20 258 aa12.52□□□□□ -0.41
UBE3D-204ENST00000430071 SCRT1Q9BWW7 348 aa12.52□□□□□ -0.41
UBE3D-204ENST00000430071 PARD6GQ9BYG4 376 aaPredicted RBP12.52□□□□□ -0.41
UBE3D-204ENST00000430071 SLC25A39Q9BZJ4 359 aaPredicted RBP12.52□□□□□ -0.41
UBE3D-204ENST00000430071 ARV1Q9H2C2 271 aa12.52□□□□□ -0.41
UBE3D-204ENST00000430071 RFNGQ9Y644 331 aa12.52□□□□□ -0.41
UBE3D-204ENST00000430071 ZNF98A6NK75 572 aa12.51□□□□□ -0.41
UBE3D-204ENST00000430071 H3BRN7 92 aa12.51□□□□□ -0.41
UBE3D-204ENST00000430071 COX7A2P2O60397 106 aa12.51□□□□□ -0.41
UBE3D-204ENST00000430071 GCSAMLQ5JQS6 135 aa12.51□□□□□ -0.41
UBE3D-204ENST00000430071 SCGB1C1Q8TD33 95 aa12.51□□□□□ -0.41
UBE3D-204ENST00000430071 SHANK2-AS3Q9BTD1 123 aa12.51□□□□□ -0.41
UBE3D-204ENST00000430071 PFDN2Q9UHV9 154 aa12.51□□□□□ -0.41
UBE3D-204ENST00000430071 PLECQ15149 4684 aaKnown RBP12.5□□□□□ -0.41
UBE3D-204ENST00000430071 LCE6AA0A183 80 aa12.5□□□□□ -0.41
UBE3D-204ENST00000430071 CD5P06127 495 aa12.5□□□□□ -0.41
UBE3D-204ENST00000430071 RPL35AP18077 110 aaKnown RBP12.5□□□□□ -0.41
UBE3D-204ENST00000430071 CXCL2P19875 107 aa12.5□□□□□ -0.41
UBE3D-204ENST00000430071 RPL11P62913 178 aaKnown RBP12.5□□□□□ -0.41
UBE3D-204ENST00000430071 C1orf194Q5T5A4 169 aa12.5□□□□□ -0.41
UBE3D-204ENST00000430071 MORN5Q5VZ52 161 aa12.5□□□□□ -0.41
UBE3D-204ENST00000430071 RPL7L1Q6DKI1 246 aaKnown RBP12.5□□□□□ -0.41
UBE3D-204ENST00000430071 Q6ZRG5 221 aa12.5□□□□□ -0.41
UBE3D-204ENST00000430071 ZNF709Q8N972 641 aa12.5□□□□□ -0.41
UBE3D-204ENST00000430071 SLC25A32Q9H2D1 315 aa12.5□□□□□ -0.41
UBE3D-204ENST00000430071 MS4A6AQ9H2W1 248 aa12.5□□□□□ -0.41
UBE3D-204ENST00000430071 SLC25A22Q9H936 323 aa12.5□□□□□ -0.41
UBE3D-204ENST00000430071 DNAH1Q9P2D7 4330 aa12.49□□□□□ -0.41
UBE3D-204ENST00000430071 HELTA6NFD8 242 aa12.49□□□□□ -0.41
UBE3D-204ENST00000430071 ZNF266Q14584 549 aa12.49□□□□□ -0.41
UBE3D-204ENST00000430071 C10orf113Q5VZT2 155 aa12.49□□□□□ -0.41
UBE3D-204ENST00000430071 SIGLEC15Q6ZMC9 328 aa12.49□□□□□ -0.41
UBE3D-204ENST00000430071 KCNRGQ8N5I3 272 aa12.49□□□□□ -0.41
UBE3D-204ENST00000430071 DNAJC4Q9NNZ3 241 aa12.49□□□□□ -0.41
UBE3D-204ENST00000430071 ELOA3CA0A087WX78 387 aaPredicted RBP12.48□□□□□ -0.41
UBE3D-204ENST00000430071 C17orf112F2Z3M2 114 aa12.48□□□□□ -0.41
UBE3D-204ENST00000430071 C1QBP02746 253 aa12.48□□□□□ -0.41
UBE3D-204ENST00000430071 ZNF345Q14585 488 aa12.48□□□□□ -0.41
UBE3D-204ENST00000430071 DEFB135Q30KP9 77 aa12.48□□□□□ -0.41
UBE3D-204ENST00000430071 LINC00305Q7Z4B0 112 aa12.48□□□□□ -0.41
UBE3D-204ENST00000430071 WFDC3Q8IUB2 231 aa12.48□□□□□ -0.41
UBE3D-204ENST00000430071 OR8I2Q8N0Y5 310 aa12.48□□□□□ -0.41
UBE3D-204ENST00000430071 STXBP6Q8NFX7 210 aa12.48□□□□□ -0.41
UBE3D-204ENST00000430071 OR1L4Q8NGR5 311 aa12.48□□□□□ -0.41
UBE3D-204ENST00000430071 CYTL1Q9NRR1 136 aa12.48□□□□□ -0.41
UBE3D-204ENST00000430071 KCNIP2Q9NS61 270 aa12.48□□□□□ -0.41
UBE3D-204ENST00000430071 OR4C46A6NHA9 309 aa12.47□□□□□ -0.41
UBE3D-204ENST00000430071 FAM24BQ8N5W8 94 aa12.47□□□□□ -0.41
UBE3D-204ENST00000430071 HSD17B11Q8NBQ5 300 aa12.47□□□□□ -0.41
UBE3D-204ENST00000430071 DCANP1Q8TF63 244 aa12.47□□□□□ -0.41
UBE3D-204ENST00000430071 C17orf77Q96MU5 243 aa12.47□□□□□ -0.41
UBE3D-204ENST00000430071 ATP6V0CP27449 155 aa12.46□□□□□ -0.41
UBE3D-204ENST00000430071 S100A7P31151 101 aa12.46□□□□□ -0.41
UBE3D-204ENST00000430071 PAFAH1B2P68402 229 aa12.46□□□□□ -0.41
UBE3D-204ENST00000430071 FFAR4Q5NUL3 377 aa12.46□□□□□ -0.41
UBE3D-204ENST00000430071 PFDN5Q99471 154 aa12.46□□□□□ -0.41
UBE3D-204ENST00000430071 MAP6D1Q9H9H5 199 aa12.46□□□□□ -0.41
UBE3D-204ENST00000430071 ALMS1Q8TCU4 4167 aa12.45□□□□□ -0.42
UBE3D-204ENST00000430071 TRAV2A0A0B4J234 112 aa12.45□□□□□ -0.42
UBE3D-204ENST00000430071 TRAV5A0A0B4J249 113 aa12.45□□□□□ -0.42
UBE3D-204ENST00000430071 A0A0J9YWU9 116 aa12.45□□□□□ -0.42
UBE3D-204ENST00000430071 K7EQG2 157 aa12.45□□□□□ -0.42
UBE3D-204ENST00000430071 DNASE2O00115 360 aaPredicted RBP12.45□□□□□ -0.42
UBE3D-204ENST00000430071 TAAR5O14804 337 aa12.45□□□□□ -0.42
UBE3D-204ENST00000430071 S100A7AQ86SG5 101 aa12.45□□□□□ -0.42
UBE3D-204ENST00000430071 GATAD1Q8WUU5 269 aa12.45□□□□□ -0.42
UBE3D-204ENST00000430071 SH3BGRL3Q9H299 93 aa12.45□□□□□ -0.42
UBE3D-204ENST00000430071 NRN1Q9NPD7 142 aa12.45□□□□□ -0.42
UBE3D-204ENST00000430071 TIMM9Q9Y5J7 89 aa12.45□□□□□ -0.42
UBE3D-204ENST00000430071 BORCS7-ASMTA0A0B4J1R7 106 aa12.44□□□□□ -0.42
UBE3D-204ENST00000430071 A0A0D9SG52 128 aa12.44□□□□□ -0.42
UBE3D-204ENST00000430071 MRPS12O15235 138 aaKnown RBP12.44□□□□□ -0.42
UBE3D-204ENST00000430071 SPRY2O43597 315 aa12.44□□□□□ -0.42
UBE3D-204ENST00000430071 SPATA31B1PQ5VZV4 182 aa12.44□□□□□ -0.42
UBE3D-204ENST00000430071 GPR82Q96P67 336 aa12.44□□□□□ -0.42
UBE3D-204ENST00000430071 ARPC5LQ9BPX5 153 aa12.44□□□□□ -0.42
UBE3D-204ENST00000430071 SEPSECSQ9HD40 501 aaKnown RBP12.44□□□□□ -0.42
UBE3D-204ENST00000430071 GALR1P47211 349 aa12.43□□□□□ -0.42
UBE3D-204ENST00000430071 LGALSLQ3ZCW2 172 aaPredicted RBP12.43□□□□□ -0.42
UBE3D-204ENST00000430071 FAM78BQ5VT40 261 aa12.43□□□□□ -0.42
UBE3D-204ENST00000430071 TMUB2Q71RG4 321 aa12.43□□□□□ -0.42
UBE3D-204ENST00000430071 PSMG3Q9BT73 122 aaPredicted RBP12.43□□□□□ -0.42
UBE3D-204ENST00000430071 SOCS3O14543 225 aa12.43□□□□□ -0.42
UBE3D-204ENST00000430071 BCL2L11O43521 198 aa12.43□□□□□ -0.42
UBE3D-204ENST00000430071 JTBO76095 146 aa12.43□□□□□ -0.42
UBE3D-204ENST00000430071 RPL7P18124 248 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms