RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 CD5P06127 495 aa9.3□□□□□ -0.92
GPC1-204ENST00000426280 SELENOTP62341 195 aa9.3□□□□□ -0.92
GPC1-204ENST00000426280 OPCMLQ14982 345 aa9.3□□□□□ -0.92
GPC1-204ENST00000426280 PATE2Q6UY27 113 aa9.3□□□□□ -0.92
GPC1-204ENST00000426280 ZNF546Q86UE3 836 aa9.3□□□□□ -0.92
GPC1-204ENST00000426280 PPP1R14BQ96C90 147 aa9.3□□□□□ -0.92
GPC1-204ENST00000426280 NARS2Q96I59 477 aaKnown RBP9.3□□□□□ -0.92
GPC1-204ENST00000426280 ARL6Q9H0F7 186 aa9.3□□□□□ -0.92
GPC1-204ENST00000426280 AGRNO00468 2067 aa9.3□□□□□ -0.92
GPC1-204ENST00000426280 A0A1B0GVG6 124 aa9.29□□□□□ -0.92
GPC1-204ENST00000426280 RNF222A6NCQ9 220 aa9.29□□□□□ -0.92
GPC1-204ENST00000426280 CFDP00746 253 aaPredicted RBP9.29□□□□□ -0.92
GPC1-204ENST00000426280 OR5G3P0C626 314 aa9.29□□□□□ -0.92
GPC1-204ENST00000426280 C4BPBP20851 252 aa9.29□□□□□ -0.92
GPC1-204ENST00000426280 BMI1P35226 326 aa9.29□□□□□ -0.92
GPC1-204ENST00000426280 PLP1P60201 277 aa9.29□□□□□ -0.92
GPC1-204ENST00000426280 GRAMD2BQ96HH9 432 aa9.29□□□□□ -0.92
GPC1-204ENST00000426280 AQP10Q96PS8 301 aa9.29□□□□□ -0.92
GPC1-204ENST00000426280 UHRF2Q96PU4 802 aa9.29□□□□□ -0.92
GPC1-204ENST00000426280 ATP5SQ99766 215 aa9.29□□□□□ -0.92
GPC1-204ENST00000426280 SCRT1Q9BWW7 348 aa9.29□□□□□ -0.92
GPC1-204ENST00000426280 WDR61Q9GZS3 305 aaKnown RBP9.29□□□□□ -0.92
GPC1-204ENST00000426280 FBXL17Q9UF56 701 aa9.29□□□□□ -0.92
GPC1-204ENST00000426280 RFNGQ9Y644 331 aa9.29□□□□□ -0.92
GPC1-204ENST00000426280 HYDINQ4G0P3 5121 aa9.29□□□□□ -0.92
GPC1-204ENST00000426280 ZNF98A6NK75 572 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 HYPMO75409 117 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 CA1P00915 261 aaPredicted RBP9.28□□□□□ -0.92
GPC1-204ENST00000426280 AP2S1P53680 142 aaPredicted RBP9.28□□□□□ -0.92
GPC1-204ENST00000426280 PRR20EP86478 221 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 PRR20CP86479 221 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 PRR20DP86480 221 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 PRR20BP86481 221 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 PRR20AP86496 221 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 RAB31Q13636 194 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 PMS2P11Q13670 270 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 PSMG4Q5JS54 123 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 ACTL10Q5JWF8 245 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 GDF5OSQ5U4N7 250 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 SIGLEC15Q6ZMC9 328 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 OR11H2Q8NH07 326 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 TMEM37Q8WXS4 190 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 NPCDR1Q9BY65 106 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 SLC25A22Q9H936 323 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 CLEC5AQ9NY25 188 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 TNFSF18Q9UNG2 199 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 HIGD1AQ9Y241 93 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 PXMP4Q9Y6I8 212 aa9.28□□□□□ -0.92
GPC1-204ENST00000426280 PLECQ15149 4684 aaKnown RBP9.27□□□□□ -0.93
GPC1-204ENST00000426280 HELTA6NFD8 242 aa9.27□□□□□ -0.93
GPC1-204ENST00000426280 H3BRN7 92 aa9.27□□□□□ -0.93
GPC1-204ENST00000426280 SOCS3O14543 225 aa9.27□□□□□ -0.93
GPC1-204ENST00000426280 NUP62P37198 522 aaPredicted RBP9.27□□□□□ -0.93
GPC1-204ENST00000426280 RPL29P47914 159 aaKnown RBP9.27□□□□□ -0.93
GPC1-204ENST00000426280 B2MP61769 119 aa9.27□□□□□ -0.93
GPC1-204ENST00000426280 MORN5Q5VZ52 161 aa9.27□□□□□ -0.93
GPC1-204ENST00000426280 CSNK1G2-AS1Q8NCQ2 148 aa9.27□□□□□ -0.93
GPC1-204ENST00000426280 OR11H4Q8NGC9 324 aa9.27□□□□□ -0.93
GPC1-204ENST00000426280 ST6GAL2Q96JF0 529 aa9.27□□□□□ -0.93
GPC1-204ENST00000426280 RARRES2Q99969 163 aa9.27□□□□□ -0.93
GPC1-204ENST00000426280 RSG1Q9BU20 258 aa9.27□□□□□ -0.93
GPC1-204ENST00000426280 SLC25A39Q9BZJ4 359 aaPredicted RBP9.27□□□□□ -0.93
GPC1-204ENST00000426280 ARV1Q9H2C2 271 aa9.27□□□□□ -0.93
GPC1-204ENST00000426280 SLC25A32Q9H2D1 315 aa9.27□□□□□ -0.93
GPC1-204ENST00000426280 NRN1Q9NPD7 142 aa9.27□□□□□ -0.93
GPC1-204ENST00000426280 SLC39A9Q9NUM3 307 aa9.27□□□□□ -0.93
GPC1-204ENST00000426280 ARPC5O15511 151 aa9.26□□□□□ -0.93
GPC1-204ENST00000426280 COX7A2P2O60397 106 aa9.26□□□□□ -0.93
GPC1-204ENST00000426280 MPDU1O75352 247 aa9.26□□□□□ -0.93
GPC1-204ENST00000426280 GCSAMLQ5JQS6 135 aa9.26□□□□□ -0.93
GPC1-204ENST00000426280 IGFL4Q6B9Z1 124 aa9.26□□□□□ -0.93
GPC1-204ENST00000426280 STHQ8IWL8 128 aa9.26□□□□□ -0.93
GPC1-204ENST00000426280 OR8I2Q8N0Y5 310 aa9.26□□□□□ -0.93
GPC1-204ENST00000426280 INO80EQ8NBZ0 244 aaPredicted RBP9.26□□□□□ -0.93
GPC1-204ENST00000426280 C20orf173Q96LM9 149 aa9.26□□□□□ -0.93
GPC1-204ENST00000426280 SHANK2-AS3Q9BTD1 123 aa9.26□□□□□ -0.93
GPC1-204ENST00000426280 LYSTQ99698 3801 aa9.26□□□□□ -0.93
GPC1-204ENST00000426280 H3BMM0 161 aa9.25□□□□□ -0.93
GPC1-204ENST00000426280 IFNA5P01569 189 aa9.25□□□□□ -0.93
GPC1-204ENST00000426280 RBMY1A1P0DJD3 496 aaKnown RBP9.25□□□□□ -0.93
GPC1-204ENST00000426280 RBMY1CP0DJD4 496 aa9.25□□□□□ -0.93
GPC1-204ENST00000426280 PRB4P10163 310 aaPredicted RBP9.25□□□□□ -0.93
GPC1-204ENST00000426280 NANOS2P60321 138 aaKnown RBP9.25□□□□□ -0.93
GPC1-204ENST00000426280 RBMY1FQ15415 496 aaKnown RBP9.25□□□□□ -0.93
GPC1-204ENST00000426280 Q6ZRG5 221 aa9.25□□□□□ -0.93
GPC1-204ENST00000426280 LINC00305Q7Z4B0 112 aa9.25□□□□□ -0.93
GPC1-204ENST00000426280 SCGB1C1Q8TD33 95 aa9.25□□□□□ -0.93
GPC1-204ENST00000426280 PFDN2Q9UHV9 154 aa9.25□□□□□ -0.93
GPC1-204ENST00000426280 X6R8D5 127 aa9.25□□□□□ -0.93
GPC1-204ENST00000426280 TRAV5A0A0B4J249 113 aa9.24□□□□□ -0.93
GPC1-204ENST00000426280 F6UB75 175 aa9.24□□□□□ -0.93
GPC1-204ENST00000426280 SNRPCP09234 159 aaKnown RBP9.24□□□□□ -0.93
GPC1-204ENST00000426280 FXYD7P58549 80 aa9.24□□□□□ -0.93
GPC1-204ENST00000426280 CD300CQ08708 224 aa9.24□□□□□ -0.93
GPC1-204ENST00000426280 C1orf194Q5T5A4 169 aa9.24□□□□□ -0.93
GPC1-204ENST00000426280 PXDC1Q5TGL8 231 aa9.24□□□□□ -0.93
GPC1-204ENST00000426280 C10orf113Q5VZT2 155 aa9.24□□□□□ -0.93
GPC1-204ENST00000426280 SPATA31B1PQ5VZV4 182 aa9.24□□□□□ -0.93
GPC1-204ENST00000426280 ZNF709Q8N972 641 aa9.24□□□□□ -0.93
GPC1-204ENST00000426280 Q8NAQ8 132 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms