RNA–Protein interactions for RNA: ENST00000421450.1

TNFAIP3-203, Transcript of TNF alpha induced protein 3, humanhuman

TSL 2

Gene TNFAIP3, Length 421 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-203ENST00000421450 UPK1BO75841 260 aa12.78□□□□□ -0.36
TNFAIP3-203ENST00000421450 FXYD7P58549 80 aa12.78□□□□□ -0.36
TNFAIP3-203ENST00000421450 SLC38A11Q08AI6 406 aa12.78□□□□□ -0.36
TNFAIP3-203ENST00000421450 Q8NAQ8 132 aa12.78□□□□□ -0.36
TNFAIP3-203ENST00000421450 GPN1Q9HCN4 374 aaPredicted RBP12.78□□□□□ -0.36
TNFAIP3-203ENST00000421450 DEDDO75618 318 aa12.77□□□□□ -0.37
TNFAIP3-203ENST00000421450 ARL16Q0P5N6 197 aa12.77□□□□□ -0.37
TNFAIP3-203ENST00000421450 UHRF2Q96PU4 802 aa12.77□□□□□ -0.37
TNFAIP3-203ENST00000421450 SHANK2-AS3Q9BTD1 123 aa12.77□□□□□ -0.37
TNFAIP3-203ENST00000421450 GGACTQ9BVM4 153 aa12.77□□□□□ -0.37
TNFAIP3-203ENST00000421450 LYSTQ99698 3801 aa12.76□□□□□ -0.37
TNFAIP3-203ENST00000421450 FAM24AA6NFZ4 105 aa12.76□□□□□ -0.37
TNFAIP3-203ENST00000421450 ZNF705EA8MWA4 302 aaPredicted RBP12.76□□□□□ -0.37
TNFAIP3-203ENST00000421450 F6UB75 175 aa12.76□□□□□ -0.37
TNFAIP3-203ENST00000421450 CST7O76096 145 aa12.76□□□□□ -0.37
TNFAIP3-203ENST00000421450 LY6G6CO95867 125 aa12.76□□□□□ -0.37
TNFAIP3-203ENST00000421450 RPL7P18124 248 aaKnown RBP12.76□□□□□ -0.37
TNFAIP3-203ENST00000421450 SPATA31B1PQ5VZV4 182 aa12.76□□□□□ -0.37
TNFAIP3-203ENST00000421450 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.76□□□□□ -0.37
TNFAIP3-203ENST00000421450 ZNF546Q86UE3 836 aa12.76□□□□□ -0.37
TNFAIP3-203ENST00000421450 CSNK1G2-AS1Q8NCQ2 148 aa12.76□□□□□ -0.37
TNFAIP3-203ENST00000421450 LRRC20Q8TCA0 184 aa12.76□□□□□ -0.37
TNFAIP3-203ENST00000421450 X6R8D5 127 aa12.76□□□□□ -0.37
TNFAIP3-203ENST00000421450 IGHV3OR16-12A0A075B7B8 117 aa12.75□□□□□ -0.37
TNFAIP3-203ENST00000421450 AGPAT2O15120 278 aa12.75□□□□□ -0.37
TNFAIP3-203ENST00000421450 RBMY1A1P0DJD3 496 aaKnown RBP12.75□□□□□ -0.37
TNFAIP3-203ENST00000421450 RBMY1CP0DJD4 496 aa12.75□□□□□ -0.37
TNFAIP3-203ENST00000421450 PLP1P60201 277 aa12.75□□□□□ -0.37
TNFAIP3-203ENST00000421450 RAB31Q13636 194 aa12.75□□□□□ -0.37
TNFAIP3-203ENST00000421450 RBMY1FQ15415 496 aaKnown RBP12.75□□□□□ -0.37
TNFAIP3-203ENST00000421450 FAM78BQ5VT40 261 aa12.75□□□□□ -0.37
TNFAIP3-203ENST00000421450 C20orf173Q96LM9 149 aa12.75□□□□□ -0.37
TNFAIP3-203ENST00000421450 ARV1Q9H2C2 271 aa12.75□□□□□ -0.37
TNFAIP3-203ENST00000421450 RNF24Q9Y225 148 aa12.75□□□□□ -0.37
TNFAIP3-203ENST00000421450 PSG9Q00887 426 aa12.74□□□□□ -0.37
TNFAIP3-203ENST00000421450 RAB32Q13637 225 aa12.74□□□□□ -0.37
TNFAIP3-203ENST00000421450 PXDC1Q5TGL8 231 aa12.74□□□□□ -0.37
TNFAIP3-203ENST00000421450 IGFL4Q6B9Z1 124 aa12.74□□□□□ -0.37
TNFAIP3-203ENST00000421450 LINC00476Q8WZB0 136 aa12.74□□□□□ -0.37
TNFAIP3-203ENST00000421450 A0A0J9YX75 114 aa12.73□□□□□ -0.37
TNFAIP3-203ENST00000421450 COX7A2P2O60397 106 aa12.73□□□□□ -0.37
TNFAIP3-203ENST00000421450 CAMLGP49069 296 aa12.73□□□□□ -0.37
TNFAIP3-203ENST00000421450 STX12Q86Y82 276 aa12.73□□□□□ -0.37
TNFAIP3-203ENST00000421450 MGST2Q99735 147 aa12.73□□□□□ -0.37
TNFAIP3-203ENST00000421450 SLC35B3Q9H1N7 401 aa12.73□□□□□ -0.37
TNFAIP3-203ENST00000421450 UQCC1Q9NVA1 299 aa12.73□□□□□ -0.37
TNFAIP3-203ENST00000421450 INMT-MINDY4F8WBC2 141 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 HLA-DMBP28068 263 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 SULT1A1P50225 295 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 DEFA1P59665 94 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 DEFA3P59666 94 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 HBG1P69891 147 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 HBG2P69892 147 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 IFITM3Q01628 133 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 PATE2Q6UY27 113 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 LINC00305Q7Z4B0 112 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 NRARPQ7Z6K4 114 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 RNF182Q8N6D2 247 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 ZNF738Q8NE65 137 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 C2CD4CQ8TF44 421 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 C17orf77Q96MU5 243 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 CLUHP3Q96NS8 147 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 HRH4Q9H3N8 390 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 BATF3Q9NR55 127 aa12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 LYRM2Q9NU23 88 aaPredicted RBP12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 PLECQ15149 4684 aaKnown RBP12.72□□□□□ -0.37
TNFAIP3-203ENST00000421450 ALMS1Q8TCU4 4167 aa12.71□□□□□ -0.37
TNFAIP3-203ENST00000421450 ELOA3CA0A087WX78 387 aaPredicted RBP12.71□□□□□ -0.37
TNFAIP3-203ENST00000421450 PRAF2O60831 178 aa12.71□□□□□ -0.37
TNFAIP3-203ENST00000421450 DUSP14O95147 198 aaKnown RBP12.71□□□□□ -0.37
TNFAIP3-203ENST00000421450 SIX6O95475 246 aa12.71□□□□□ -0.37
TNFAIP3-203ENST00000421450 RLN2P04090 185 aa12.71□□□□□ -0.37
TNFAIP3-203ENST00000421450 S100A11P31949 105 aa12.71□□□□□ -0.37
TNFAIP3-203ENST00000421450 BAXQ07812 192 aa12.71□□□□□ -0.37
TNFAIP3-203ENST00000421450 Q6ZRG5 221 aa12.71□□□□□ -0.37
TNFAIP3-203ENST00000421450 TMEM252Q8N6L7 170 aa12.71□□□□□ -0.37
TNFAIP3-203ENST00000421450 C11orf1Q9H5F2 150 aa12.71□□□□□ -0.37
TNFAIP3-203ENST00000421450 GOLT1BQ9Y3E0 138 aa12.71□□□□□ -0.37
TNFAIP3-203ENST00000421450 TRAV8-2A0A0B4J237 113 aa12.7□□□□□ -0.38
TNFAIP3-203ENST00000421450 UBE2L5PA0A1B0GUS4 154 aa12.7□□□□□ -0.38
TNFAIP3-203ENST00000421450 IGSF23A1L1A6 192 aa12.7□□□□□ -0.38
TNFAIP3-203ENST00000421450 C11orf94C9JXX5 98 aa12.7□□□□□ -0.38
TNFAIP3-203ENST00000421450 EMP1P54849 157 aa12.7□□□□□ -0.38
TNFAIP3-203ENST00000421450 IL15RAQ13261 267 aa12.7□□□□□ -0.38
TNFAIP3-203ENST00000421450 C10orf113Q5VZT2 155 aa12.7□□□□□ -0.38
TNFAIP3-203ENST00000421450 ZNF705DP0CH99 300 aaPredicted RBP12.69□□□□□ -0.38
TNFAIP3-203ENST00000421450 ZNF705BP0CI00 300 aaPredicted RBP12.69□□□□□ -0.38
TNFAIP3-203ENST00000421450 LRRC37A5PQ49AS3 106 aa12.69□□□□□ -0.38
TNFAIP3-203ENST00000421450 MIC13Q5XKP0 118 aa12.69□□□□□ -0.38
TNFAIP3-203ENST00000421450 ZNF705AQ6ZN79 300 aaPredicted RBP12.69□□□□□ -0.38
TNFAIP3-203ENST00000421450 BPIFA4PQ86YQ2 179 aa12.69□□□□□ -0.38
TNFAIP3-203ENST00000421450 ZNF709Q8N972 641 aa12.69□□□□□ -0.38
TNFAIP3-203ENST00000421450 TMEM208Q9BTX3 173 aa12.69□□□□□ -0.38
TNFAIP3-203ENST00000421450 PPP1R14DQ9NXH3 145 aa12.69□□□□□ -0.38
TNFAIP3-203ENST00000421450 WDR83OSQ9Y284 106 aa12.69□□□□□ -0.38
TNFAIP3-203ENST00000421450 A0A087X0K7 114 aa12.68□□□□□ -0.38
TNFAIP3-203ENST00000421450 SMIM9A6NGZ8 99 aa12.68□□□□□ -0.38
TNFAIP3-203ENST00000421450 IGLL5B9A064 214 aa12.68□□□□□ -0.38
TNFAIP3-203ENST00000421450 SNRPCP09234 159 aaKnown RBP12.68□□□□□ -0.38
TNFAIP3-203ENST00000421450 CNN1P51911 297 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 228.6 ms