RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 SLC45A2Q9UMX9 530 aa13.19□□□□□ -0.3
VCP-202ENST00000417448 OR4C46A6NHA9 309 aa13.18□□□□□ -0.3
VCP-202ENST00000417448 FGF7P21781 194 aa13.18□□□□□ -0.3
VCP-202ENST00000417448 BAXQ07812 192 aa13.18□□□□□ -0.3
VCP-202ENST00000417448 MIC13Q5XKP0 118 aa13.18□□□□□ -0.3
VCP-202ENST00000417448 PATE2Q6UY27 113 aa13.18□□□□□ -0.3
VCP-202ENST00000417448 THAP6Q8TBB0 222 aa13.18□□□□□ -0.3
VCP-202ENST00000417448 CHAC2Q8WUX2 184 aa13.18□□□□□ -0.3
VCP-202ENST00000417448 UHRF2Q96PU4 802 aa13.18□□□□□ -0.3
VCP-202ENST00000417448 SLC25A22Q9H936 323 aa13.18□□□□□ -0.3
VCP-202ENST00000417448 WDR83OSQ9Y284 106 aa13.18□□□□□ -0.3
VCP-202ENST00000417448 SPRY2O43597 315 aa13.17□□□□□ -0.3
VCP-202ENST00000417448 OR5G3P0C626 314 aa13.17□□□□□ -0.3
VCP-202ENST00000417448 RPL12P30050 165 aaKnown RBP13.17□□□□□ -0.3
VCP-202ENST00000417448 CAMLGP49069 296 aa13.17□□□□□ -0.3
VCP-202ENST00000417448 HBG1P69891 147 aa13.17□□□□□ -0.3
VCP-202ENST00000417448 HBG2P69892 147 aa13.17□□□□□ -0.3
VCP-202ENST00000417448 VWC2Q2TAL6 325 aa13.17□□□□□ -0.3
VCP-202ENST00000417448 DEFB135Q30KP9 77 aa13.17□□□□□ -0.3
VCP-202ENST00000417448 SIGLEC15Q6ZMC9 328 aa13.17□□□□□ -0.3
VCP-202ENST00000417448 SCRT1Q9BWW7 348 aa13.17□□□□□ -0.3
VCP-202ENST00000417448 TP53TG1Q9Y2A0 90 aa13.17□□□□□ -0.3
VCP-202ENST00000417448 PAFAH1B2P68402 229 aa13.16□□□□□ -0.3
VCP-202ENST00000417448 SLC25A32Q9H2D1 315 aa13.16□□□□□ -0.3
VCP-202ENST00000417448 MAP6D1Q9H9H5 199 aa13.16□□□□□ -0.3
VCP-202ENST00000417448 HSPB11Q9Y547 144 aa13.16□□□□□ -0.3
VCP-202ENST00000417448 ZNF98A6NK75 572 aa13.15□□□□□ -0.3
VCP-202ENST00000417448 SMLR1H3BR10 107 aa13.15□□□□□ -0.3
VCP-202ENST00000417448 K7EQG2 157 aa13.15□□□□□ -0.3
VCP-202ENST00000417448 HYPMO75409 117 aa13.15□□□□□ -0.3
VCP-202ENST00000417448 ZNF688P0C7X2 276 aa13.15□□□□□ -0.3
VCP-202ENST00000417448 DEFB131AP59861 70 aa13.15□□□□□ -0.3
VCP-202ENST00000417448 SELENOTP62341 195 aa13.15□□□□□ -0.3
VCP-202ENST00000417448 ATP6V1FQ16864 119 aa13.15□□□□□ -0.3
VCP-202ENST00000417448 Q6ZWC4 215 aa13.15□□□□□ -0.3
VCP-202ENST00000417448 OR8I2Q8N0Y5 310 aa13.15□□□□□ -0.3
VCP-202ENST00000417448 DCANP1Q8TF63 244 aa13.15□□□□□ -0.3
VCP-202ENST00000417448 SLC25A39Q9BZJ4 359 aaPredicted RBP13.15□□□□□ -0.3
VCP-202ENST00000417448 WFDC1Q9HC57 220 aa13.15□□□□□ -0.3
VCP-202ENST00000417448 HIGD1AQ9Y241 93 aa13.15□□□□□ -0.3
VCP-202ENST00000417448 RFNGQ9Y644 331 aa13.15□□□□□ -0.3
VCP-202ENST00000417448 HSPG2P98160 4391 aa13.14□□□□□ -0.31
VCP-202ENST00000417448 HELTA6NFD8 242 aa13.14□□□□□ -0.31
VCP-202ENST00000417448 CFDP00746 253 aaPredicted RBP13.14□□□□□ -0.31
VCP-202ENST00000417448 SNRPCP09234 159 aaKnown RBP13.14□□□□□ -0.31
VCP-202ENST00000417448 GIPP09681 153 aaPredicted RBP13.14□□□□□ -0.31
VCP-202ENST00000417448 PET100P0DJ07 73 aa13.14□□□□□ -0.31
VCP-202ENST00000417448 RPL35AP18077 110 aaKnown RBP13.14□□□□□ -0.31
VCP-202ENST00000417448 ZNF546Q86UE3 836 aa13.14□□□□□ -0.31
VCP-202ENST00000417448 H3BRN7 92 aa13.13□□□□□ -0.31
VCP-202ENST00000417448 CD5P06127 495 aa13.13□□□□□ -0.31
VCP-202ENST00000417448 DEFB1P60022 68 aa13.13□□□□□ -0.31
VCP-202ENST00000417448 MORN5Q5VZ52 161 aa13.13□□□□□ -0.31
VCP-202ENST00000417448 C17orf77Q96MU5 243 aa13.13□□□□□ -0.31
VCP-202ENST00000417448 RSG1Q9BU20 258 aa13.13□□□□□ -0.31
VCP-202ENST00000417448 ARV1Q9H2C2 271 aa13.13□□□□□ -0.31
VCP-202ENST00000417448 TRAV5A0A0B4J249 113 aa13.12□□□□□ -0.31
VCP-202ENST00000417448 PRB4P10163 310 aaPredicted RBP13.12□□□□□ -0.31
VCP-202ENST00000417448 PLP1P60201 277 aa13.12□□□□□ -0.31
VCP-202ENST00000417448 RAP2BP61225 183 aa13.12□□□□□ -0.31
VCP-202ENST00000417448 RAB31Q13636 194 aa13.12□□□□□ -0.31
VCP-202ENST00000417448 OPCMLQ14982 345 aa13.12□□□□□ -0.31
VCP-202ENST00000417448 GCSAMLQ5JQS6 135 aa13.12□□□□□ -0.31
VCP-202ENST00000417448 OR2T35Q8NGX2 323 aa13.12□□□□□ -0.31
VCP-202ENST00000417448 TMEM37Q8WXS4 190 aa13.12□□□□□ -0.31
VCP-202ENST00000417448 SHANK2-AS3Q9BTD1 123 aa13.12□□□□□ -0.31
VCP-202ENST00000417448 PFDN2Q9UHV9 154 aa13.12□□□□□ -0.31
VCP-202ENST00000417448 PXMP4Q9Y6I8 212 aa13.12□□□□□ -0.31
VCP-202ENST00000417448 KNCNA6PVL3 124 aa13.11□□□□□ -0.31
VCP-202ENST00000417448 G3V3Q6 166 aa13.11□□□□□ -0.31
VCP-202ENST00000417448 COX7A2P2O60397 106 aa13.11□□□□□ -0.31
VCP-202ENST00000417448 IGFL4Q6B9Z1 124 aa13.11□□□□□ -0.31
VCP-202ENST00000417448 LINC00336Q6ZUF6 198 aa13.11□□□□□ -0.31
VCP-202ENST00000417448 RNF183Q96D59 192 aa13.11□□□□□ -0.31
VCP-202ENST00000417448 ATP5SQ99766 215 aa13.11□□□□□ -0.31
VCP-202ENST00000417448 NPCDR1Q9BY65 106 aa13.11□□□□□ -0.31
VCP-202ENST00000417448 NRN1Q9NPD7 142 aa13.11□□□□□ -0.31
VCP-202ENST00000417448 SLC39A9Q9NUM3 307 aa13.11□□□□□ -0.31
VCP-202ENST00000417448 FXYD6-FXYD2A0A087WZ82 144 aa13.1□□□□□ -0.31
VCP-202ENST00000417448 AP2S1P53680 142 aaPredicted RBP13.1□□□□□ -0.31
VCP-202ENST00000417448 NANOS2P60321 138 aaKnown RBP13.1□□□□□ -0.31
VCP-202ENST00000417448 B2MP61769 119 aa13.1□□□□□ -0.31
VCP-202ENST00000417448 PSMG4Q5JS54 123 aa13.1□□□□□ -0.31
VCP-202ENST00000417448 C1orf194Q5T5A4 169 aa13.1□□□□□ -0.31
VCP-202ENST00000417448 LINC00305Q7Z4B0 112 aa13.1□□□□□ -0.31
VCP-202ENST00000417448 WDR61Q9GZS3 305 aaKnown RBP13.1□□□□□ -0.31
VCP-202ENST00000417448 TRAV2A0A0B4J234 112 aa13.09□□□□□ -0.31
VCP-202ENST00000417448 H3BTX0 84 aa13.09□□□□□ -0.31
VCP-202ENST00000417448 NUP62P37198 522 aaPredicted RBP13.09□□□□□ -0.31
VCP-202ENST00000417448 RPL29P47914 159 aaKnown RBP13.09□□□□□ -0.31
VCP-202ENST00000417448 APOC4P55056 127 aa13.09□□□□□ -0.31
VCP-202ENST00000417448 FGL1Q08830 312 aa13.09□□□□□ -0.31
VCP-202ENST00000417448 C10orf113Q5VZT2 155 aa13.09□□□□□ -0.31
VCP-202ENST00000417448 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.09□□□□□ -0.31
VCP-202ENST00000417448 LINC00052Q96N35 136 aa13.09□□□□□ -0.31
VCP-202ENST00000417448 DNAJC4Q9NNZ3 241 aa13.09□□□□□ -0.31
VCP-202ENST00000417448 FBXL17Q9UF56 701 aa13.09□□□□□ -0.31
VCP-202ENST00000417448 SPATA31B1PQ5VZV4 182 aa13.08□□□□□ -0.32
VCP-202ENST00000417448 Q6ZRG5 221 aa13.08□□□□□ -0.32
VCP-202ENST00000417448 C20orf173Q96LM9 149 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms