RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 EPPK1P58107 5090 aaKnown RBP14.16□□□□□ -0.14
TSPAN4-209ENST00000409543 A0A0J9YX75 114 aa14.15□□□□□ -0.14
TSPAN4-209ENST00000409543 HLA-DMBP28068 263 aa14.15□□□□□ -0.14
TSPAN4-209ENST00000409543 ZNF705AQ6ZN79 300 aaPredicted RBP14.15□□□□□ -0.14
TSPAN4-209ENST00000409543 C12orf45Q8N5I9 185 aaPredicted RBP14.15□□□□□ -0.14
TSPAN4-209ENST00000409543 OR4B1Q8NGF8 309 aa14.15□□□□□ -0.14
TSPAN4-209ENST00000409543 S100ZQ8WXG8 99 aa14.15□□□□□ -0.14
TSPAN4-209ENST00000409543 C20orf173Q96LM9 149 aa14.15□□□□□ -0.14
TSPAN4-209ENST00000409543 NEU1Q99519 415 aa14.15□□□□□ -0.14
TSPAN4-209ENST00000409543 FAM240BA0A1B0GVZ2 78 aa14.14□□□□□ -0.15
TSPAN4-209ENST00000409543 FAM25EA8MYX2 175 aa14.14□□□□□ -0.15
TSPAN4-209ENST00000409543 F6UB75 175 aa14.14□□□□□ -0.15
TSPAN4-209ENST00000409543 L7N2F9 121 aa14.14□□□□□ -0.15
TSPAN4-209ENST00000409543 DEDDO75618 318 aa14.14□□□□□ -0.15
TSPAN4-209ENST00000409543 OR5G3P0C626 314 aa14.14□□□□□ -0.15
TSPAN4-209ENST00000409543 TCTAP57738 103 aa14.14□□□□□ -0.15
TSPAN4-209ENST00000409543 FXYD7P58549 80 aa14.14□□□□□ -0.15
TSPAN4-209ENST00000409543 VAMP2P63027 116 aa14.14□□□□□ -0.15
TSPAN4-209ENST00000409543 PSG9Q00887 426 aa14.14□□□□□ -0.15
TSPAN4-209ENST00000409543 ARL16Q0P5N6 197 aa14.14□□□□□ -0.15
TSPAN4-209ENST00000409543 FAM78BQ5VT40 261 aa14.14□□□□□ -0.15
TSPAN4-209ENST00000409543 LGALS9CQ6DKI2 356 aa14.14□□□□□ -0.15
TSPAN4-209ENST00000409543 S100A7AQ86SG5 101 aa14.14□□□□□ -0.15
TSPAN4-209ENST00000409543 ZNF709Q8N972 641 aa14.14□□□□□ -0.15
TSPAN4-209ENST00000409543 C5orf51A6NDU8 294 aa14.13□□□□□ -0.15
TSPAN4-209ENST00000409543 ZNF705FA8MVS1 300 aaPredicted RBP14.13□□□□□ -0.15
TSPAN4-209ENST00000409543 ZNF705DP0CH99 300 aaPredicted RBP14.13□□□□□ -0.15
TSPAN4-209ENST00000409543 ZNF705BP0CI00 300 aaPredicted RBP14.13□□□□□ -0.15
TSPAN4-209ENST00000409543 RPL7P18124 248 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-209ENST00000409543 SLC38A11Q08AI6 406 aa14.13□□□□□ -0.15
TSPAN4-209ENST00000409543 PXDC1Q5TGL8 231 aa14.13□□□□□ -0.15
TSPAN4-209ENST00000409543 MZT2BQ6NZ67 158 aa14.13□□□□□ -0.15
TSPAN4-209ENST00000409543 C2orf50Q96LR7 162 aa14.13□□□□□ -0.15
TSPAN4-209ENST00000409543 SMIM9A6NGZ8 99 aa14.12□□□□□ -0.15
TSPAN4-209ENST00000409543 ASAH1Q13510 395 aa14.12□□□□□ -0.15
TSPAN4-209ENST00000409543 ZNF546Q86UE3 836 aa14.12□□□□□ -0.15
TSPAN4-209ENST00000409543 UHRF2Q96PU4 802 aa14.12□□□□□ -0.15
TSPAN4-209ENST00000409543 ARL6Q9H0F7 186 aa14.12□□□□□ -0.15
TSPAN4-209ENST00000409543 SLC35B3Q9H1N7 401 aa14.12□□□□□ -0.15
TSPAN4-209ENST00000409543 RNF24Q9Y225 148 aa14.12□□□□□ -0.15
TSPAN4-209ENST00000409543 LSM5Q9Y4Y9 91 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-209ENST00000409543 TRAV8-2A0A0B4J237 113 aa14.11□□□□□ -0.15
TSPAN4-209ENST00000409543 A8MTW9 85 aa14.11□□□□□ -0.15
TSPAN4-209ENST00000409543 GOSR2O14653 212 aa14.11□□□□□ -0.15
TSPAN4-209ENST00000409543 PATE2Q6UY27 113 aa14.11□□□□□ -0.15
TSPAN4-209ENST00000409543 Q6ZTC4 211 aa14.11□□□□□ -0.15
TSPAN4-209ENST00000409543 C11orf1Q9H5F2 150 aa14.11□□□□□ -0.15
TSPAN4-209ENST00000409543 CELA1Q9UNI1 258 aa14.11□□□□□ -0.15
TSPAN4-209ENST00000409543 TRAV10A0A0B4J240 114 aa14.1□□□□□ -0.15
TSPAN4-209ENST00000409543 A6NHS1 94 aa14.1□□□□□ -0.15
TSPAN4-209ENST00000409543 IGLL5B9A064 214 aa14.1□□□□□ -0.15
TSPAN4-209ENST00000409543 AGPAT2O15120 278 aa14.1□□□□□ -0.15
TSPAN4-209ENST00000409543 BCAP31P51572 246 aa14.1□□□□□ -0.15
TSPAN4-209ENST00000409543 CAV2P51636 162 aa14.1□□□□□ -0.15
TSPAN4-209ENST00000409543 FGL1Q08830 312 aa14.1□□□□□ -0.15
TSPAN4-209ENST00000409543 ARV1Q9H2C2 271 aa14.1□□□□□ -0.15
TSPAN4-209ENST00000409543 A0A087X0K7 114 aa14.09□□□□□ -0.15
TSPAN4-209ENST00000409543 TMEM189A5PLL7 270 aa14.09□□□□□ -0.15
TSPAN4-209ENST00000409543 DUSP14O95147 198 aaKnown RBP14.09□□□□□ -0.15
TSPAN4-209ENST00000409543 PVALBP20472 110 aaPredicted RBP14.09□□□□□ -0.15
TSPAN4-209ENST00000409543 IL15RAQ13261 267 aa14.09□□□□□ -0.15
TSPAN4-209ENST00000409543 C12orf74Q32Q52 190 aa14.09□□□□□ -0.15
TSPAN4-209ENST00000409543 IGFL4Q6B9Z1 124 aa14.09□□□□□ -0.15
TSPAN4-209ENST00000409543 AMTNQ6UX39 209 aa14.09□□□□□ -0.15
TSPAN4-209ENST00000409543 APLNQ9ULZ1 77 aa14.09□□□□□ -0.15
TSPAN4-209ENST00000409543 GOLT1BQ9Y3E0 138 aa14.09□□□□□ -0.15
TSPAN4-209ENST00000409543 RFNGQ9Y644 331 aa14.09□□□□□ -0.15
TSPAN4-209ENST00000409543 IGHV3OR16-12A0A075B7B8 117 aa14.08□□□□□ -0.16
TSPAN4-209ENST00000409543 C1orf158Q8N1D5 194 aa14.08□□□□□ -0.16
TSPAN4-209ENST00000409543 RNF182Q8N6D2 247 aa14.08□□□□□ -0.16
TSPAN4-209ENST00000409543 MGST2Q99735 147 aa14.08□□□□□ -0.16
TSPAN4-209ENST00000409543 FAM24AA6NFZ4 105 aa14.07□□□□□ -0.16
TSPAN4-209ENST00000409543 UPK1BO75841 260 aa14.07□□□□□ -0.16
TSPAN4-209ENST00000409543 CST7O76096 145 aa14.07□□□□□ -0.16
TSPAN4-209ENST00000409543 CNN1P51911 297 aaKnown RBP14.07□□□□□ -0.16
TSPAN4-209ENST00000409543 RAB31Q13636 194 aa14.07□□□□□ -0.16
TSPAN4-209ENST00000409543 MRPS12O15235 138 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-209ENST00000409543 AMBPP02760 352 aa14.06□□□□□ -0.16
TSPAN4-209ENST00000409543 SPART-AS1P0CW21 52 aa14.06□□□□□ -0.16
TSPAN4-209ENST00000409543 S100A10P60903 97 aa14.06□□□□□ -0.16
TSPAN4-209ENST00000409543 LINC00305Q7Z4B0 112 aa14.06□□□□□ -0.16
TSPAN4-209ENST00000409543 RPP25LQ8N5L8 163 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-209ENST00000409543 ZNF738Q8NE65 137 aa14.06□□□□□ -0.16
TSPAN4-209ENST00000409543 ENKURQ8TC29 256 aa14.06□□□□□ -0.16
TSPAN4-209ENST00000409543 IGF2BP2-AS1Q96M15 143 aa14.06□□□□□ -0.16
TSPAN4-209ENST00000409543 LYRM2Q9NU23 88 aaPredicted RBP14.06□□□□□ -0.16
TSPAN4-209ENST00000409543 DEFB131BA0A096LNP1 70 aa14.05□□□□□ -0.16
TSPAN4-209ENST00000409543 COX7A2P2O60397 106 aa14.05□□□□□ -0.16
TSPAN4-209ENST00000409543 CXCL3P19876 107 aa14.05□□□□□ -0.16
TSPAN4-209ENST00000409543 CAMLGP49069 296 aa14.05□□□□□ -0.16
TSPAN4-209ENST00000409543 SULT1A1P50225 295 aa14.05□□□□□ -0.16
TSPAN4-209ENST00000409543 RAB32Q13637 225 aa14.05□□□□□ -0.16
TSPAN4-209ENST00000409543 VWC2Q2TAL6 325 aa14.05□□□□□ -0.16
TSPAN4-209ENST00000409543 ZNF767PQ75MW2 155 aa14.05□□□□□ -0.16
TSPAN4-209ENST00000409543 OR11H7Q8NGC8 314 aa14.05□□□□□ -0.16
TSPAN4-209ENST00000409543 LRRC20Q8TCA0 184 aa14.05□□□□□ -0.16
TSPAN4-209ENST00000409543 TMEM37Q8WXS4 190 aa14.05□□□□□ -0.16
TSPAN4-209ENST00000409543 RNF126Q9BV68 326 aa14.05□□□□□ -0.16
TSPAN4-209ENST00000409543 GPN1Q9HCN4 374 aaPredicted RBP14.05□□□□□ -0.16
TSPAN4-209ENST00000409543 UQCC1Q9NVA1 299 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms