RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 TM4SF5O14894 197 aa10.3□□□□□ -0.76
CACNA1C-209ENST00000399603 BSPH1Q075Z2 132 aa10.3□□□□□ -0.76
CACNA1C-209ENST00000399603 SPATA31B1PQ5VZV4 182 aa10.3□□□□□ -0.76
CACNA1C-209ENST00000399603 RNF222A6NCQ9 220 aa10.3□□□□□ -0.76
CACNA1C-209ENST00000399603 LINC01559Q495D7 138 aa10.3□□□□□ -0.76
CACNA1C-209ENST00000399603 TMEM219Q86XT9 240 aa10.3□□□□□ -0.76
CACNA1C-209ENST00000399603 SHANK3Q9BYB0 1731 aa10.3□□□□□ -0.76
CACNA1C-209ENST00000399603 CKAP5Q14008 2032 aa10.3□□□□□ -0.76
CACNA1C-209ENST00000399603 F5H768 121 aa10.3□□□□□ -0.76
CACNA1C-209ENST00000399603 CSRP3P50461 194 aa10.29□□□□□ -0.76
CACNA1C-209ENST00000399603 MARF1Q9Y4F3 1742 aaKnown RBP10.29□□□□□ -0.76
CACNA1C-209ENST00000399603 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.29□□□□□ -0.76
CACNA1C-209ENST00000399603 LIME1Q9H400 295 aa10.29□□□□□ -0.76
CACNA1C-209ENST00000399603 POLR2AP24928 1970 aaKnown RBP10.29□□□□□ -0.76
CACNA1C-209ENST00000399603 IL18BPO95998 194 aa10.29□□□□□ -0.76
CACNA1C-209ENST00000399603 CLPSL2Q6UWE3 100 aa10.29□□□□□ -0.76
CACNA1C-209ENST00000399603 H3BMG7 143 aa10.29□□□□□ -0.76
CACNA1C-209ENST00000399603 K7EP13 123 aa10.29□□□□□ -0.76
CACNA1C-209ENST00000399603 TIMM17AQ99595 171 aa10.29□□□□□ -0.76
CACNA1C-209ENST00000399603 NPSP0C0P6 89 aa10.28□□□□□ -0.76
CACNA1C-209ENST00000399603 NEGR1Q7Z3B1 354 aa10.28□□□□□ -0.76
CACNA1C-209ENST00000399603 TIAF1O95411 115 aa10.28□□□□□ -0.76
CACNA1C-209ENST00000399603 METRNQ9UJH8 293 aa10.28□□□□□ -0.76
CACNA1C-209ENST00000399603 MSRB2Q9Y3D2 182 aa10.28□□□□□ -0.76
CACNA1C-209ENST00000399603 C15orf61A6NNL5 157 aa10.28□□□□□ -0.76
CACNA1C-209ENST00000399603 RNF183Q96D59 192 aa10.28□□□□□ -0.76
CACNA1C-209ENST00000399603 PRSS29PA6NIE9 313 aa10.28□□□□□ -0.76
CACNA1C-209ENST00000399603 CELA3AP09093 270 aa10.28□□□□□ -0.76
CACNA1C-209ENST00000399603 LIMS1P48059 325 aa10.28□□□□□ -0.76
CACNA1C-209ENST00000399603 NGFRP08138 427 aa10.28□□□□□ -0.76
CACNA1C-209ENST00000399603 NEU4Q8WWR8 484 aaPredicted RBP10.28□□□□□ -0.76
CACNA1C-209ENST00000399603 TP53TG1Q9Y2A0 90 aa10.28□□□□□ -0.76
CACNA1C-209ENST00000399603 PIKFYVEQ9Y2I7 2098 aa10.27□□□□□ -0.76
CACNA1C-209ENST00000399603 LYNX1G3V0Z9 82 aa10.27□□□□□ -0.76
CACNA1C-209ENST00000399603 K7ERJ3 54 aa10.27□□□□□ -0.76
CACNA1C-209ENST00000399603 LYNX1P0DP58 116 aa10.27□□□□□ -0.76
CACNA1C-209ENST00000399603 MP68P56378 58 aa10.27□□□□□ -0.76
CACNA1C-209ENST00000399603 MUSTN1Q8IVN3 82 aa10.27□□□□□ -0.77
CACNA1C-209ENST00000399603 C9orf118A6NHY6 69 aa10.27□□□□□ -0.77
CACNA1C-209ENST00000399603 F8W1H4 67 aa10.27□□□□□ -0.77
CACNA1C-209ENST00000399603 Q71RC1 249 aaPredicted RBP10.27□□□□□ -0.77
CACNA1C-209ENST00000399603 KLHDC3Q9BQ90 382 aa10.27□□□□□ -0.77
CACNA1C-209ENST00000399603 IGKV3D-7A0A0C4DH55 119 aa10.27□□□□□ -0.77
CACNA1C-209ENST00000399603 RHODO00212 210 aa10.27□□□□□ -0.77
CACNA1C-209ENST00000399603 NCOR1P1Q9H4R4 102 aa10.27□□□□□ -0.77
CACNA1C-209ENST00000399603 DOCK5Q9H7D0 1870 aa10.27□□□□□ -0.77
CACNA1C-209ENST00000399603 A0A096LPF7 62 aa10.27□□□□□ -0.77
CACNA1C-209ENST00000399603 IGHV3-38A0A0C4DH36 116 aa10.27□□□□□ -0.77
CACNA1C-209ENST00000399603 ZCCHC24Q8N2G6 241 aaKnown RBP10.27□□□□□ -0.77
CACNA1C-209ENST00000399603 F6UB75 175 aa10.26□□□□□ -0.77
CACNA1C-209ENST00000399603 RNASE2P10153 161 aaKnown RBP10.26□□□□□ -0.77
CACNA1C-209ENST00000399603 C15orf32Q32M92 178 aa10.26□□□□□ -0.77
CACNA1C-209ENST00000399603 PYY3Q5JQD4 70 aa10.26□□□□□ -0.77
CACNA1C-209ENST00000399603 DUX4L9Q6RFH8 374 aaPredicted RBP10.26□□□□□ -0.77
CACNA1C-209ENST00000399603 FAM90A1Q86YD7 464 aa10.26□□□□□ -0.77
CACNA1C-209ENST00000399603 SPSB3Q6PJ21 355 aa10.26□□□□□ -0.77
CACNA1C-209ENST00000399603 LAMB2P55268 1798 aa10.26□□□□□ -0.77
CACNA1C-209ENST00000399603 CECR9P0C854 216 aa10.26□□□□□ -0.77
CACNA1C-209ENST00000399603 MPLKIPQ8TAP9 179 aa10.26□□□□□ -0.77
CACNA1C-209ENST00000399603 A0A1B0GX51 115 aa10.26□□□□□ -0.77
CACNA1C-209ENST00000399603 AMTNQ6UX39 209 aa10.26□□□□□ -0.77
CACNA1C-209ENST00000399603 A0A0G2JK05 382 aa10.26□□□□□ -0.77
CACNA1C-209ENST00000399603 DKK1O94907 266 aa10.26□□□□□ -0.77
CACNA1C-209ENST00000399603 IGKV1-5P01602 117 aa10.26□□□□□ -0.77
CACNA1C-209ENST00000399603 NTN5Q8WTR8 489 aaPredicted RBP10.26□□□□□ -0.77
CACNA1C-209ENST00000399603 WFDC1Q9HC57 220 aa10.25□□□□□ -0.77
CACNA1C-209ENST00000399603 ZNF407Q9C0G0 2248 aa10.25□□□□□ -0.77
CACNA1C-209ENST00000399603 NACAE9PAV3 2078 aa10.25□□□□□ -0.77
CACNA1C-209ENST00000399603 COX6A1P12074 109 aa10.25□□□□□ -0.77
CACNA1C-209ENST00000399603 RNF126Q9BV68 326 aa10.25□□□□□ -0.77
CACNA1C-209ENST00000399603 C1QTNF5Q9BXJ0 243 aa10.25□□□□□ -0.77
CACNA1C-209ENST00000399603 PRCDQ00LT1 54 aa10.25□□□□□ -0.77
CACNA1C-209ENST00000399603 SIGLEC12Q96PQ1 595 aa10.25□□□□□ -0.77
CACNA1C-209ENST00000399603 EP300Q09472 2414 aaPredicted RBP10.25□□□□□ -0.77
CACNA1C-209ENST00000399603 IGKV1D-13A0A0B4J2D9 117 aa10.25□□□□□ -0.77
CACNA1C-209ENST00000399603 IGKV1-13P0DP09 117 aa10.25□□□□□ -0.77
CACNA1C-209ENST00000399603 C18orf12Q96KH6 178 aa10.25□□□□□ -0.77
CACNA1C-209ENST00000399603 LINC00312Q9Y6C7 94 aa10.25□□□□□ -0.77
CACNA1C-209ENST00000399603 UBR3Q6ZT12 1888 aa10.25□□□□□ -0.77
CACNA1C-209ENST00000399603 SMIM10L1P0DMW3 83 aa10.24□□□□□ -0.77
CACNA1C-209ENST00000399603 SMIM10Q96HG1 83 aa10.24□□□□□ -0.77
CACNA1C-209ENST00000399603 IGFBPL1Q8WX77 278 aa10.24□□□□□ -0.77
CACNA1C-209ENST00000399603 SIGLEC9Q9Y336 463 aa10.24□□□□□ -0.77
CACNA1C-209ENST00000399603 THBDP07204 575 aa10.24□□□□□ -0.77
CACNA1C-209ENST00000399603 C10orf55Q5SWW7 151 aa10.24□□□□□ -0.77
CACNA1C-209ENST00000399603 IGFBP3P17936 291 aaPredicted RBP10.24□□□□□ -0.77
CACNA1C-209ENST00000399603 PKIGQ9Y2B9 76 aa10.24□□□□□ -0.77
CACNA1C-209ENST00000399603 TGFBR3LH3BV60 316 aa10.24□□□□□ -0.77
CACNA1C-209ENST00000399603 IGLV3-21P80748 117 aaPredicted RBP10.24□□□□□ -0.77
CACNA1C-209ENST00000399603 COL5A3P25940 1745 aaPredicted RBP10.24□□□□□ -0.77
CACNA1C-209ENST00000399603 A0A0A6YYD4 124 aa10.23□□□□□ -0.77
CACNA1C-209ENST00000399603 PROP1O75360 226 aa10.23□□□□□ -0.77
CACNA1C-209ENST00000399603 IGHV1OR15-1A0A075B7D0 117 aa10.23□□□□□ -0.77
CACNA1C-209ENST00000399603 TEX48A0A1B0GUV7 120 aa10.23□□□□□ -0.77
CACNA1C-209ENST00000399603 ANKRD39Q53RE8 183 aa10.23□□□□□ -0.77
CACNA1C-209ENST00000399603 TMEM242Q9NWH2 141 aa10.23□□□□□ -0.77
CACNA1C-209ENST00000399603 COLCA2A8K830 154 aa10.23□□□□□ -0.77
CACNA1C-209ENST00000399603 COX5BP10606 129 aa10.23□□□□□ -0.77
CACNA1C-209ENST00000399603 TRBV25-1A0A075B6N4 114 aa10.23□□□□□ -0.77
CACNA1C-209ENST00000399603 CELA3BP08861 270 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms