RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 PPP1R14BQ96C90 147 aa9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 GRAMD2BQ96HH9 432 aa9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 SLC25A22Q9H936 323 aa9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 DNAJC4Q9NNZ3 241 aa9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 TIMM9Q9Y5J7 89 aa9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 PRKDCP78527 4128 aaKnown RBP9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 C17orf112F2Z3M2 114 aa9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 SOCS3O14543 225 aa9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 TAAR5O14804 337 aa9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 BCL2L11O43521 198 aa9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 CD5P06127 495 aa9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 LORP23490 312 aaPredicted RBP9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 FFAR4Q5NUL3 377 aa9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 Q6ZRG5 221 aa9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 OR8I2Q8N0Y5 310 aa9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 C9orf62Q8N4C0 152 aa9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 ZNF709Q8N972 641 aa9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 STXBP6Q8NFX7 210 aa9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 OR1L4Q8NGR5 311 aa9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 OR2G3Q8NGZ4 309 aa9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 GATAD1Q8WUU5 269 aa9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 ARPC5LQ9BPX5 153 aa9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 PSMG3Q9BT73 122 aaPredicted RBP9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 SEPSECSQ9HD40 501 aaKnown RBP9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 KCNIP2Q9NS61 270 aa9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 ZMAT5Q9UDW3 170 aaKnown RBP9.25□□□□□ -0.93
HLA-DQB1-203ENST00000399082 TRAV2A0A0B4J234 112 aa9.24□□□□□ -0.93
HLA-DQB1-203ENST00000399082 A0A0D9SG52 128 aa9.24□□□□□ -0.93
HLA-DQB1-203ENST00000399082 HELTA6NFD8 242 aa9.24□□□□□ -0.93
HLA-DQB1-203ENST00000399082 EIF3GO75821 320 aaKnown RBP eCLIP9.24□□□□□ -0.93
HLA-DQB1-203ENST00000399082 CD81P60033 236 aa9.24□□□□□ -0.93
HLA-DQB1-203ENST00000399082 RAB2AP61019 212 aa9.24□□□□□ -0.93
HLA-DQB1-203ENST00000399082 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.24□□□□□ -0.93
HLA-DQB1-203ENST00000399082 TMUB2Q71RG4 321 aa9.24□□□□□ -0.93
HLA-DQB1-203ENST00000399082 MIR17HGQ75NE6 70 aa9.24□□□□□ -0.93
HLA-DQB1-203ENST00000399082 WFDC3Q8IUB2 231 aa9.24□□□□□ -0.93
HLA-DQB1-203ENST00000399082 FAM167A-AS1Q96KT0 104 aa9.24□□□□□ -0.93
HLA-DQB1-203ENST00000399082 PFDN5Q99471 154 aa9.24□□□□□ -0.93
HLA-DQB1-203ENST00000399082 PFDN2Q9UHV9 154 aa9.24□□□□□ -0.93
HLA-DQB1-203ENST00000399082 BORCS7-ASMTA0A0B4J1R7 106 aa9.23□□□□□ -0.93
HLA-DQB1-203ENST00000399082 OR4C46A6NHA9 309 aa9.23□□□□□ -0.93
HLA-DQB1-203ENST00000399082 JTBO76095 146 aa9.23□□□□□ -0.93
HLA-DQB1-203ENST00000399082 NKX2-5P52952 324 aaPredicted RBP9.23□□□□□ -0.93
HLA-DQB1-203ENST00000399082 RPL11P62913 178 aaKnown RBP9.23□□□□□ -0.93
HLA-DQB1-203ENST00000399082 ZNF124Q15973 351 aa9.23□□□□□ -0.93
HLA-DQB1-203ENST00000399082 ZFP69Q49AA0 526 aa9.23□□□□□ -0.93
HLA-DQB1-203ENST00000399082 FAM78BQ5VT40 261 aa9.23□□□□□ -0.93
HLA-DQB1-203ENST00000399082 HYLS1Q96M11 299 aa9.23□□□□□ -0.93
HLA-DQB1-203ENST00000399082 CITED4Q96RK1 184 aa9.23□□□□□ -0.93
HLA-DQB1-203ENST00000399082 SLC25A2Q9BXI2 301 aa9.23□□□□□ -0.93
HLA-DQB1-203ENST00000399082 MAP6D1Q9H9H5 199 aa9.23□□□□□ -0.93
HLA-DQB1-203ENST00000399082 NRN1Q9NPD7 142 aa9.23□□□□□ -0.93
HLA-DQB1-203ENST00000399082 UBQLN2Q9UHD9 624 aa9.23□□□□□ -0.93
HLA-DQB1-203ENST00000399082 A0A087X0K7 114 aa9.22□□□□□ -0.93
HLA-DQB1-203ENST00000399082 H3BQ15 152 aa9.22□□□□□ -0.93
HLA-DQB1-203ENST00000399082 IGLC2P0DOY2 106 aa9.22□□□□□ -0.93
HLA-DQB1-203ENST00000399082 SPP1P10451 314 aa9.22□□□□□ -0.93
HLA-DQB1-203ENST00000399082 M6PRP20645 277 aa9.22□□□□□ -0.93
HLA-DQB1-203ENST00000399082 DEFB125Q8N687 156 aa9.22□□□□□ -0.93
HLA-DQB1-203ENST00000399082 ZNF503Q96F45 646 aa9.22□□□□□ -0.93
HLA-DQB1-203ENST00000399082 GPR82Q96P67 336 aa9.22□□□□□ -0.93
HLA-DQB1-203ENST00000399082 FUT9Q9Y231 359 aa9.22□□□□□ -0.93
HLA-DQB1-203ENST00000399082 TRAV8-2A0A0B4J237 113 aa9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 KANTRA0A1W2PQU2 76 aa9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 DNASE2O00115 360 aaPredicted RBP9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 SNRPCP09234 159 aaKnown RBP9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 ZNF688P0C7X2 276 aa9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 IGHV4-30-4P0DP06 118 aa9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 PYYP10082 97 aa9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 RPL7P18124 248 aaKnown RBP9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 S100A7P31151 101 aa9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 GALR1P47211 349 aa9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 PAFAH1B2P68402 229 aa9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 ACOT6Q3I5F7 207 aaPredicted RBP9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 SSX7Q7RTT5 188 aa9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 GTSCR1Q86UQ5 136 aa9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 RPP25LQ8N5L8 163 aaKnown RBP9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 GNPNAT1Q96EK6 184 aaPredicted RBP9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 FAM110AQ9BQ89 295 aa9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 ZNF471Q9BX82 626 aaPredicted RBP9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 MRPL32Q9BYC8 188 aaKnown RBP9.21□□□□□ -0.94
HLA-DQB1-203ENST00000399082 OR11H12B2RN74 326 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 H3BTX0 84 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 SLC17A3O00476 420 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 SERF2P84101 59 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 FAM122CQ6P4D5 195 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 S100A7AQ86SG5 101 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 BPIFA4PQ86YQ2 179 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 APRG1Q8IVJ8 170 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 OR10G4Q8NGN3 311 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 OR10G9Q8NGN4 311 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 OR10G7Q8NGN6 311 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 STOML3Q8TAV4 291 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 MRAPQ8TCY5 172 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 C20orf173Q96LM9 149 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 RPRMQ9NS64 109 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 ZNF586Q9NXT0 402 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 TMEM14CQ9P0S9 112 aa9.2□□□□□ -0.94
HLA-DQB1-203ENST00000399082 LOC100996750A0A140TA64 210 aa9.19□□□□□ -0.94
HLA-DQB1-203ENST00000399082 A8MZ25 164 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms