RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 MEOX2P50222 304 aa12.15□□□□□ -0.46
APTR-201ENST00000398043 RAP2BP61225 183 aa12.15□□□□□ -0.46
APTR-201ENST00000398043 TMEM41BQ5BJD5 291 aa12.15□□□□□ -0.46
APTR-201ENST00000398043 PXDC1Q5TGL8 231 aa12.15□□□□□ -0.46
APTR-201ENST00000398043 OR11H2Q8NH07 326 aa12.15□□□□□ -0.46
APTR-201ENST00000398043 CHAC2Q8WUX2 184 aa12.15□□□□□ -0.46
APTR-201ENST00000398043 CLUHP3Q96NS8 147 aa12.15□□□□□ -0.46
APTR-201ENST00000398043 RSG1Q9BU20 258 aa12.15□□□□□ -0.46
APTR-201ENST00000398043 ARL6Q9H0F7 186 aa12.15□□□□□ -0.46
APTR-201ENST00000398043 RYR3Q15413 4870 aa12.14□□□□□ -0.47
APTR-201ENST00000398043 TRAV8-2A0A0B4J237 113 aa12.14□□□□□ -0.47
APTR-201ENST00000398043 OR5G3P0C626 314 aa12.14□□□□□ -0.47
APTR-201ENST00000398043 S100A7P31151 101 aa12.14□□□□□ -0.47
APTR-201ENST00000398043 ID1P41134 155 aa12.14□□□□□ -0.47
APTR-201ENST00000398043 PRR20EP86478 221 aa12.14□□□□□ -0.47
APTR-201ENST00000398043 PRR20CP86479 221 aa12.14□□□□□ -0.47
APTR-201ENST00000398043 PRR20DP86480 221 aa12.14□□□□□ -0.47
APTR-201ENST00000398043 PRR20BP86481 221 aa12.14□□□□□ -0.47
APTR-201ENST00000398043 PRR20AP86496 221 aa12.14□□□□□ -0.47
APTR-201ENST00000398043 SAMD13Q5VXD3 122 aa12.14□□□□□ -0.47
APTR-201ENST00000398043 FOXI2Q6ZQN5 318 aa12.14□□□□□ -0.47
APTR-201ENST00000398043 TMEM37Q8WXS4 190 aa12.14□□□□□ -0.47
APTR-201ENST00000398043 ARV1Q9H2C2 271 aa12.14□□□□□ -0.47
APTR-201ENST00000398043 C11orf68Q9H3H3 251 aaKnown RBP12.14□□□□□ -0.47
APTR-201ENST00000398043 UQCC1Q9NVA1 299 aa12.14□□□□□ -0.47
APTR-201ENST00000398043 OR5AC2Q9NZP5 309 aa12.14□□□□□ -0.47
APTR-201ENST00000398043 DYNC2H1Q8NCM8 4307 aaKnown RBP12.13□□□□□ -0.47
APTR-201ENST00000398043 A0A087X0K7 114 aa12.13□□□□□ -0.47
APTR-201ENST00000398043 A8MTW9 85 aa12.13□□□□□ -0.47
APTR-201ENST00000398043 ZNF705EA8MWA4 302 aaPredicted RBP12.13□□□□□ -0.47
APTR-201ENST00000398043 CYCSP99999 105 aaKnown RBP12.13□□□□□ -0.47
APTR-201ENST00000398043 LINC00052Q96N35 136 aa12.13□□□□□ -0.47
APTR-201ENST00000398043 RNF126Q9BV68 326 aa12.13□□□□□ -0.47
APTR-201ENST00000398043 X6R8D5 127 aa12.13□□□□□ -0.47
APTR-201ENST00000398043 E5RGE8 158 aa12.12□□□□□ -0.47
APTR-201ENST00000398043 RPL7P18124 248 aaKnown RBP12.12□□□□□ -0.47
APTR-201ENST00000398043 CAMLGP49069 296 aa12.12□□□□□ -0.47
APTR-201ENST00000398043 HBG1P69891 147 aa12.12□□□□□ -0.47
APTR-201ENST00000398043 HBG2P69892 147 aa12.12□□□□□ -0.47
APTR-201ENST00000398043 NHLH2Q02577 135 aa12.12□□□□□ -0.47
APTR-201ENST00000398043 ATP6V1FQ16864 119 aa12.12□□□□□ -0.47
APTR-201ENST00000398043 MORN5Q5VZ52 161 aa12.12□□□□□ -0.47
APTR-201ENST00000398043 MIC13Q5XKP0 118 aa12.12□□□□□ -0.47
APTR-201ENST00000398043 STX12Q86Y82 276 aa12.12□□□□□ -0.47
APTR-201ENST00000398043 Q8NAQ8 132 aa12.12□□□□□ -0.47
APTR-201ENST00000398043 A0A0J9YX75 114 aa12.11□□□□□ -0.47
APTR-201ENST00000398043 F6UB75 175 aa12.11□□□□□ -0.47
APTR-201ENST00000398043 PTTG1O95997 202 aa12.11□□□□□ -0.47
APTR-201ENST00000398043 RPL29P47914 159 aaKnown RBP12.11□□□□□ -0.47
APTR-201ENST00000398043 OPCMLQ14982 345 aa12.11□□□□□ -0.47
APTR-201ENST00000398043 LRRC37A5PQ49AS3 106 aa12.11□□□□□ -0.47
APTR-201ENST00000398043 LINC00305Q7Z4B0 112 aa12.11□□□□□ -0.47
APTR-201ENST00000398043 ZNF709Q8N972 641 aa12.11□□□□□ -0.47
APTR-201ENST00000398043 PPP1R1CQ8WVI7 109 aa12.11□□□□□ -0.47
APTR-201ENST00000398043 C16orf92Q96LL3 132 aa12.11□□□□□ -0.47
APTR-201ENST00000398043 CLEC5AQ9NY25 188 aa12.11□□□□□ -0.47
APTR-201ENST00000398043 ELOA3CA0A087WX78 387 aaPredicted RBP12.1□□□□□ -0.47
APTR-201ENST00000398043 LCE6AA0A183 80 aa12.1□□□□□ -0.47
APTR-201ENST00000398043 UBE2L5PA0A1B0GUS4 154 aa12.1□□□□□ -0.47
APTR-201ENST00000398043 SSNA1O43805 119 aa12.1□□□□□ -0.47
APTR-201ENST00000398043 RLN2P04090 185 aa12.1□□□□□ -0.47
APTR-201ENST00000398043 SPATA31B1PQ5VZV4 182 aa12.1□□□□□ -0.47
APTR-201ENST00000398043 LYSTQ99698 3801 aa12.1□□□□□ -0.47
APTR-201ENST00000398043 RPRMQ9NS64 109 aa12.1□□□□□ -0.47
APTR-201ENST00000398043 MPC2O95563 127 aa12.09□□□□□ -0.47
APTR-201ENST00000398043 RBMY1A1P0DJD3 496 aaKnown RBP12.09□□□□□ -0.47
APTR-201ENST00000398043 RBMY1CP0DJD4 496 aa12.09□□□□□ -0.47
APTR-201ENST00000398043 NUTF2P61970 127 aaKnown RBP12.09□□□□□ -0.47
APTR-201ENST00000398043 RAB31Q13636 194 aa12.09□□□□□ -0.47
APTR-201ENST00000398043 RBMY1FQ15415 496 aaKnown RBP12.09□□□□□ -0.47
APTR-201ENST00000398043 FAM78BQ5VT40 261 aa12.09□□□□□ -0.47
APTR-201ENST00000398043 C10orf113Q5VZT2 155 aa12.09□□□□□ -0.47
APTR-201ENST00000398043 IGFL4Q6B9Z1 124 aa12.09□□□□□ -0.47
APTR-201ENST00000398043 AMTNQ6UX39 209 aa12.09□□□□□ -0.47
APTR-201ENST00000398043 S100A7AQ86SG5 101 aa12.09□□□□□ -0.47
APTR-201ENST00000398043 SLC25A31Q9H0C2 315 aa12.09□□□□□ -0.47
APTR-201ENST00000398043 DNAJC4Q9NNZ3 241 aa12.09□□□□□ -0.47
APTR-201ENST00000398043 SLC39A9Q9NUM3 307 aa12.09□□□□□ -0.47
APTR-201ENST00000398043 XCL2Q9UBD3 114 aa12.09□□□□□ -0.47
APTR-201ENST00000398043 ALG5Q9Y673 324 aa12.09□□□□□ -0.47
APTR-201ENST00000398043 DEFB4AO15263 64 aa12.08□□□□□ -0.48
APTR-201ENST00000398043 COX7A2P2O60397 106 aa12.08□□□□□ -0.48
APTR-201ENST00000398043 CXCL3P19876 107 aa12.08□□□□□ -0.48
APTR-201ENST00000398043 FGF7P21781 194 aa12.08□□□□□ -0.48
APTR-201ENST00000398043 BAXQ07812 192 aa12.08□□□□□ -0.48
APTR-201ENST00000398043 ZNF705AQ6ZN79 300 aaPredicted RBP12.08□□□□□ -0.48
APTR-201ENST00000398043 RNF182Q8N6D2 247 aa12.08□□□□□ -0.48
APTR-201ENST00000398043 OR5C1Q8NGR4 320 aa12.08□□□□□ -0.48
APTR-201ENST00000398043 C1QTNF4Q9BXJ3 329 aa12.08□□□□□ -0.48
APTR-201ENST00000398043 RNF24Q9Y225 148 aa12.08□□□□□ -0.48
APTR-201ENST00000398043 IGHV4-28A0A0C4DH34 117 aa12.07□□□□□ -0.48
APTR-201ENST00000398043 MPDU1O75352 247 aa12.07□□□□□ -0.48
APTR-201ENST00000398043 IGKV3-20P01619 116 aa12.07□□□□□ -0.48
APTR-201ENST00000398043 IGLC2P0DOY2 106 aa12.07□□□□□ -0.48
APTR-201ENST00000398043 MIFP14174 115 aa12.07□□□□□ -0.48
APTR-201ENST00000398043 HLA-DMBP28068 263 aa12.07□□□□□ -0.48
APTR-201ENST00000398043 B2MP61769 119 aa12.07□□□□□ -0.48
APTR-201ENST00000398043 Q6ZRG5 221 aa12.07□□□□□ -0.48
APTR-201ENST00000398043 NPCDR1Q9BY65 106 aa12.07□□□□□ -0.48
APTR-201ENST00000398043 SLC35B3Q9H1N7 401 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms