RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 TMEM249Q2WGJ8 235 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 UNQ5815/PRO19632Q6UWF5 114 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 C8orf46Q8TAG6 207 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 JKAMPQ9P055 326 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 CCDC168Q8NDH2 2452 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 UQCRFS1P47985 274 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 PAFAH1B2P68402 229 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 TMEM136Q6ZRR5 245 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 SSX8Q7RTT4 187 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 POLR3KQ9Y2Y1 108 aaPredicted RBP8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 ARL2-SNX15V9GYD0 113 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 A8MWL6 223 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 BMPR1BO00238 502 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 IGLV1-47P01700 117 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 MT-ND6P03923 174 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 GPR183P32249 361 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 TMEM219Q86XT9 240 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 RNF125Q96EQ8 232 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 GRAMD2BQ96HH9 432 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 GNB1LQ9BYB4 327 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 CLEC5AQ9NY25 188 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 EREGO14944 169 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 TCRAP04437 139 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 RAB4AP20338 218 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 UCNP55089 124 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 YPEL3P61236 119 aaPredicted RBP8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 LDLRAD2Q5SZI1 272 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 DMRTA1Q5VZB9 504 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 ARPC1AQ92747 370 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 PMCHL2Q9BQD1 86 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 DSCAML1Q8TD84 2053 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 LY6EQ16553 131 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 ZNF841Q6ZN19 808 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 BCL6BQ8N143 479 aaPredicted RBP8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 TRGV9Q99603 122 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 CHRDL1Q9BU40 450 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 FBXL7Q9UJT9 491 aa8.3□□□□□ -1.08
CPSF1P1-201ENST00000397477 SVEP1Q4LDE5 3571 aa8.29□□□□□ -1.08
CPSF1P1-201ENST00000397477 IGLC1P0CG04 106 aa8.29□□□□□ -1.08
CPSF1P1-201ENST00000397477 Q71RC1 249 aaPredicted RBP8.29□□□□□ -1.08
CPSF1P1-201ENST00000397477 RPP21Q9H633 154 aaKnown RBP8.29□□□□□ -1.08
CPSF1P1-201ENST00000397477 IGLV2-8P01709 118 aa8.29□□□□□ -1.08
CPSF1P1-201ENST00000397477 HLA-DRB1P01911 266 aa8.29□□□□□ -1.08
CPSF1P1-201ENST00000397477 MFAP4P55083 255 aa8.29□□□□□ -1.08
CPSF1P1-201ENST00000397477 NUTF2P61970 127 aaKnown RBP8.29□□□□□ -1.08
CPSF1P1-201ENST00000397477 C21orf62Q9NYP8 219 aa8.29□□□□□ -1.08
CPSF1P1-201ENST00000397477 MYO9AB2RTY4 2548 aa8.29□□□□□ -1.08
CPSF1P1-201ENST00000397477 CSMD1Q96PZ7 3565 aa8.29□□□□□ -1.08
CPSF1P1-201ENST00000397477 A8MWP6 167 aa8.29□□□□□ -1.08
CPSF1P1-201ENST00000397477 SPATA45Q537H7 98 aa8.29□□□□□ -1.08
CPSF1P1-201ENST00000397477 Q6ZN92 141 aa8.29□□□□□ -1.08
CPSF1P1-201ENST00000397477 Q8TAT8 98 aa8.29□□□□□ -1.08
CPSF1P1-201ENST00000397477 TEX22C9J3V5 150 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 M0R143 59 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 TCF21O43680 179 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 GNLYP22749 145 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 C5orf64Q2M2E5 130 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 LINC00322Q6ZN03 302 aaPredicted RBP8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 TNFRSF14Q92956 283 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 NDUFAF3Q9BU61 184 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 BPESC1Q9GZL8 116 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 THYN1Q9P016 225 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 SONP18583 2426 aaKnown RBP8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 IGKV2-40A0A087WW87 121 aaPredicted RBP8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 IGKV2D-40P01614 121 aaPredicted RBP8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 BRD3OSQ6XYD6 125 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 TP53TG3Q9ULZ0 132 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 A0A1W2PS18 150 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 IGKV1-17P01599 117 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 ORM1P02763 201 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 FXYD7P58549 80 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 HBBP68871 147 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 NHLH1Q02575 133 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 COA6Q5JTJ3 125 aaKnown RBP8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 FAM120AOSQ5T036 256 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 THAP8Q8NA92 274 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 TMEM116Q8NCL8 245 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 TSKUQ8WUA8 353 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 IGF2BP2-AS1Q96M15 143 aa8.28□□□□□ -1.08
CPSF1P1-201ENST00000397477 ZNF324O75467 553 aaPredicted RBP8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 GPX1P07203 203 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 PPIFP30405 207 aaKnown RBP8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 FAM71F2Q6NXP2 309 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 BEND2Q8NDZ0 799 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 KCNS1Q96KK3 526 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 C2orf88Q9BSF0 95 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 CHODLQ9H9P2 273 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 LY96Q9Y6Y9 160 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 NDUFB8O95169 186 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 ZFP36P26651 326 aaKnown RBP8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 S100A7P31151 101 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 FBLN7Q53RD9 439 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 CCDC144NLQ6NUI1 221 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 DYNAPQ8N1N2 210 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 TRBV9A0A0B4J1U6 114 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 CBY3A6NI87 242 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 TFPI2P48307 235 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 LBHQ53QV2 105 aaPredicted RBP8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 CLEC19AQ6UXS0 136 aa8.27□□□□□ -1.09
CPSF1P1-201ENST00000397477 PRSS3P2Q8NHM4 247 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms