RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 KCNIP2Q9NS61 270 aa12.33□□□□□ -0.44
CXCL1-201ENST00000395761 RBMY1BA6NDE4 496 aaKnown RBP12.32□□□□□ -0.44
CXCL1-201ENST00000395761 RBMY1EA6NEQ0 496 aaKnown RBP12.32□□□□□ -0.44
CXCL1-201ENST00000395761 RBMY1DP0C7P1 496 aaKnown RBP12.32□□□□□ -0.44
CXCL1-201ENST00000395761 TPT1P13693 172 aaKnown RBP12.32□□□□□ -0.44
CXCL1-201ENST00000395761 SERF2P84101 59 aa12.32□□□□□ -0.44
CXCL1-201ENST00000395761 MIC13Q5XKP0 118 aa12.32□□□□□ -0.44
CXCL1-201ENST00000395761 BAP18Q8IXM2 172 aa12.32□□□□□ -0.44
CXCL1-201ENST00000395761 FAM24BQ8N5W8 94 aa12.32□□□□□ -0.44
CXCL1-201ENST00000395761 HSD17B11Q8NBQ5 300 aa12.32□□□□□ -0.44
CXCL1-201ENST00000395761 CITED4Q96RK1 184 aa12.32□□□□□ -0.44
CXCL1-201ENST00000395761 SRD5A3Q9H8P0 318 aa12.32□□□□□ -0.44
CXCL1-201ENST00000395761 SLC39A9Q9NUM3 307 aa12.32□□□□□ -0.44
CXCL1-201ENST00000395761 DOK5Q9P104 306 aa12.32□□□□□ -0.44
CXCL1-201ENST00000395761 BOLA1Q9Y3E2 137 aa12.32□□□□□ -0.44
CXCL1-201ENST00000395761 DNASE2O00115 360 aaPredicted RBP12.31□□□□□ -0.44
CXCL1-201ENST00000395761 SPP1P10451 314 aa12.31□□□□□ -0.44
CXCL1-201ENST00000395761 B2MP61769 119 aa12.31□□□□□ -0.44
CXCL1-201ENST00000395761 PAFAH1B2P68402 229 aa12.31□□□□□ -0.44
CXCL1-201ENST00000395761 LINC00322Q6ZN03 302 aaPredicted RBP12.31□□□□□ -0.44
CXCL1-201ENST00000395761 STXBP6Q8NFX7 210 aa12.31□□□□□ -0.44
CXCL1-201ENST00000395761 OR1B1Q8NGR6 318 aa12.31□□□□□ -0.44
CXCL1-201ENST00000395761 OR2G3Q8NGZ4 309 aa12.31□□□□□ -0.44
CXCL1-201ENST00000395761 PXMP4Q9Y6I8 212 aa12.31□□□□□ -0.44
CXCL1-201ENST00000395761 COL7A1Q02388 2944 aa12.31□□□□□ -0.44
CXCL1-201ENST00000395761 HELTA6NFD8 242 aa12.3□□□□□ -0.44
CXCL1-201ENST00000395761 SEC11BP0C7V7 166 aa12.3□□□□□ -0.44
CXCL1-201ENST00000395761 Q6ZRG5 221 aa12.3□□□□□ -0.44
CXCL1-201ENST00000395761 ELOA3CA0A087WX78 387 aaPredicted RBP12.29□□□□□ -0.44
CXCL1-201ENST00000395761 TRAV2A0A0B4J234 112 aa12.29□□□□□ -0.44
CXCL1-201ENST00000395761 ZNF124Q15973 351 aa12.29□□□□□ -0.44
CXCL1-201ENST00000395761 HAGHQ16775 308 aa12.29□□□□□ -0.44
CXCL1-201ENST00000395761 PATE2Q6UY27 113 aa12.29□□□□□ -0.44
CXCL1-201ENST00000395761 SIGLEC15Q6ZMC9 328 aa12.29□□□□□ -0.44
CXCL1-201ENST00000395761 APRG1Q8IVJ8 170 aa12.29□□□□□ -0.44
CXCL1-201ENST00000395761 DCANP1Q8TF63 244 aa12.29□□□□□ -0.44
CXCL1-201ENST00000395761 SLC25A32Q9H2D1 315 aa12.29□□□□□ -0.44
CXCL1-201ENST00000395761 PFDN2Q9UHV9 154 aa12.29□□□□□ -0.44
CXCL1-201ENST00000395761 RFNGQ9Y644 331 aa12.29□□□□□ -0.44
CXCL1-201ENST00000395761 ZNF98A6NK75 572 aa12.28□□□□□ -0.44
CXCL1-201ENST00000395761 K7EQG2 157 aa12.28□□□□□ -0.44
CXCL1-201ENST00000395761 HYPMO75409 117 aa12.28□□□□□ -0.44
CXCL1-201ENST00000395761 C1orf194Q5T5A4 169 aa12.28□□□□□ -0.44
CXCL1-201ENST00000395761 EIF5AL1Q6IS14 154 aaKnown RBP12.28□□□□□ -0.44
CXCL1-201ENST00000395761 OR1L4Q8NGR5 311 aa12.28□□□□□ -0.44
CXCL1-201ENST00000395761 GATAD1Q8WUU5 269 aa12.28□□□□□ -0.44
CXCL1-201ENST00000395761 FAM110AQ9BQ89 295 aa12.28□□□□□ -0.44
CXCL1-201ENST00000395761 SH3BGRL3Q9H299 93 aa12.28□□□□□ -0.44
CXCL1-201ENST00000395761 MAP6D1Q9H9H5 199 aa12.28□□□□□ -0.44
CXCL1-201ENST00000395761 DNAJC4Q9NNZ3 241 aa12.28□□□□□ -0.44
CXCL1-201ENST00000395761 MBP02144 154 aa12.27□□□□□ -0.45
CXCL1-201ENST00000395761 OR5G3P0C626 314 aa12.27□□□□□ -0.45
CXCL1-201ENST00000395761 NHLRC4P0CG21 123 aaPredicted RBP12.27□□□□□ -0.45
CXCL1-201ENST00000395761 ACOT6Q3I5F7 207 aaPredicted RBP12.27□□□□□ -0.45
CXCL1-201ENST00000395761 FFAR4Q5NUL3 377 aa12.27□□□□□ -0.45
CXCL1-201ENST00000395761 LEMD1Q68G75 181 aa12.27□□□□□ -0.45
CXCL1-201ENST00000395761 S100A7AQ86SG5 101 aa12.27□□□□□ -0.45
CXCL1-201ENST00000395761 OR8I2Q8N0Y5 310 aa12.27□□□□□ -0.45
CXCL1-201ENST00000395761 TMEM37Q8WXS4 190 aa12.27□□□□□ -0.45
CXCL1-201ENST00000395761 PHYHIPLQ96FC7 376 aa12.27□□□□□ -0.45
CXCL1-201ENST00000395761 PFDN5Q99471 154 aa12.27□□□□□ -0.45
CXCL1-201ENST00000395761 SCRT1Q9BWW7 348 aa12.27□□□□□ -0.45
CXCL1-201ENST00000395761 SLC25A39Q9BZJ4 359 aaPredicted RBP12.27□□□□□ -0.45
CXCL1-201ENST00000395761 SLC25A22Q9H936 323 aa12.27□□□□□ -0.45
CXCL1-201ENST00000395761 HIGD1AQ9Y241 93 aa12.27□□□□□ -0.45
CXCL1-201ENST00000395761 H3BRN7 92 aa12.26□□□□□ -0.45
CXCL1-201ENST00000395761 M6PRP20645 277 aa12.26□□□□□ -0.45
CXCL1-201ENST00000395761 S100A7P31151 101 aa12.26□□□□□ -0.45
CXCL1-201ENST00000395761 CMC4P56277 68 aaPredicted RBP12.26□□□□□ -0.45
CXCL1-201ENST00000395761 DEFB131AP59861 70 aa12.26□□□□□ -0.45
CXCL1-201ENST00000395761 UHRF2Q96PU4 802 aa12.26□□□□□ -0.45
CXCL1-201ENST00000395761 SHANK2-AS3Q9BTD1 123 aa12.26□□□□□ -0.45
CXCL1-201ENST00000395761 NRN1Q9NPD7 142 aa12.26□□□□□ -0.45
CXCL1-201ENST00000395761 UMAD1C9J7I0 102 aa12.25□□□□□ -0.45
CXCL1-201ENST00000395761 ZNF688P0C7X2 276 aa12.25□□□□□ -0.45
CXCL1-201ENST00000395761 C10orf113Q5VZT2 155 aa12.25□□□□□ -0.45
CXCL1-201ENST00000395761 C17orf77Q96MU5 243 aa12.25□□□□□ -0.45
CXCL1-201ENST00000395761 TM2D3Q9BRN9 247 aa12.25□□□□□ -0.45
CXCL1-201ENST00000395761 PLA2G2EQ9NZK7 142 aa12.25□□□□□ -0.45
CXCL1-201ENST00000395761 LOC102724200A0A096LPH7 203 aaPredicted RBP12.24□□□□□ -0.45
CXCL1-201ENST00000395761 COX7A2P2O60397 106 aa12.24□□□□□ -0.45
CXCL1-201ENST00000395761 RPL35AP18077 110 aaKnown RBP12.24□□□□□ -0.45
CXCL1-201ENST00000395761 TMEM41BQ5BJD5 291 aa12.24□□□□□ -0.45
CXCL1-201ENST00000395761 GCSAMLQ5JQS6 135 aa12.24□□□□□ -0.45
CXCL1-201ENST00000395761 AKR1C8PQ5T2L2 129 aa12.24□□□□□ -0.45
CXCL1-201ENST00000395761 TMED6Q8WW62 240 aa12.24□□□□□ -0.45
CXCL1-201ENST00000395761 RNF24Q9Y225 148 aa12.24□□□□□ -0.45
CXCL1-201ENST00000395761 HUWE1Q7Z6Z7 4374 aaKnown RBP12.23□□□□□ -0.45
CXCL1-201ENST00000395761 RAB5CP51148 216 aa12.23□□□□□ -0.45
CXCL1-201ENST00000395761 LINC00305Q7Z4B0 112 aa12.23□□□□□ -0.45
CXCL1-201ENST00000395761 RPP25LQ8N5L8 163 aaKnown RBP12.23□□□□□ -0.45
CXCL1-201ENST00000395761 OR10G4Q8NGN3 311 aa12.23□□□□□ -0.45
CXCL1-201ENST00000395761 OR10G9Q8NGN4 311 aa12.23□□□□□ -0.45
CXCL1-201ENST00000395761 OR10G7Q8NGN6 311 aa12.23□□□□□ -0.45
CXCL1-201ENST00000395761 MRPL32Q9BYC8 188 aaKnown RBP12.23□□□□□ -0.45
CXCL1-201ENST00000395761 RPRMQ9NS64 109 aa12.23□□□□□ -0.45
CXCL1-201ENST00000395761 NBEAL2Q6ZNJ1 2754 aa12.22□□□□□ -0.45
CXCL1-201ENST00000395761 GALR1P47211 349 aa12.22□□□□□ -0.45
CXCL1-201ENST00000395761 RAB2AP61019 212 aa12.22□□□□□ -0.45
CXCL1-201ENST00000395761 PSMG4Q5JS54 123 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms