RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 ACTL10Q5JWF8 245 aa11.15□□□□□ -0.62
RNF41-202ENST00000394013 LCNL1Q6ZST4 164 aa11.15□□□□□ -0.62
RNF41-202ENST00000394013 NOL4LQ96MY1 436 aaPredicted RBP11.15□□□□□ -0.62
RNF41-202ENST00000394013 IL36BQ9NZH7 164 aa11.15□□□□□ -0.62
RNF41-202ENST00000394013 CDC42EP3Q9UKI2 254 aa11.15□□□□□ -0.62
RNF41-202ENST00000394013 CREBBPQ92793 2442 aa11.15□□□□□ -0.63
RNF41-202ENST00000394013 IGHV3-49A0A0A0MS15 119 aa11.14□□□□□ -0.63
RNF41-202ENST00000394013 WI2-2373I1.2A0A1W2PRP0 233 aa11.14□□□□□ -0.63
RNF41-202ENST00000394013 H3BUX3 64 aa11.14□□□□□ -0.63
RNF41-202ENST00000394013 MEOX2P50222 304 aa11.14□□□□□ -0.63
RNF41-202ENST00000394013 FOXL1Q12952 345 aa11.14□□□□□ -0.63
RNF41-202ENST00000394013 SONP18583 2426 aaKnown RBP11.14□□□□□ -0.63
RNF41-202ENST00000394013 IBA57Q5T440 356 aaKnown RBP11.14□□□□□ -0.63
RNF41-202ENST00000394013 CUBNO60494 3623 aa11.14□□□□□ -0.63
RNF41-202ENST00000394013 PRRC2AP48634 2157 aaKnown RBP11.13□□□□□ -0.63
RNF41-202ENST00000394013 NDUFS8O00217 210 aa11.13□□□□□ -0.63
RNF41-202ENST00000394013 PPP1R2P9O14990 202 aa11.13□□□□□ -0.63
RNF41-202ENST00000394013 MRPS12O15235 138 aaKnown RBP11.13□□□□□ -0.63
RNF41-202ENST00000394013 ZNF207O43670 478 aaKnown RBP11.13□□□□□ -0.63
RNF41-202ENST00000394013 CLEC3BP05452 202 aa11.13□□□□□ -0.63
RNF41-202ENST00000394013 BLCAPP62952 87 aa11.13□□□□□ -0.63
RNF41-202ENST00000394013 CLEC19AQ6UXS0 136 aa11.13□□□□□ -0.63
RNF41-202ENST00000394013 HIST3H2BBQ8N257 126 aa11.13□□□□□ -0.63
RNF41-202ENST00000394013 CCDC140Q96MF4 163 aa11.13□□□□□ -0.63
RNF41-202ENST00000394013 HELZ2Q9BYK8 2649 aaKnown RBP11.13□□□□□ -0.63
RNF41-202ENST00000394013 TCRAP04437 139 aa11.13□□□□□ -0.63
RNF41-202ENST00000394013 TYMSP04818 313 aa11.13□□□□□ -0.63
RNF41-202ENST00000394013 GOLT1AQ6ZVE7 132 aa11.13□□□□□ -0.63
RNF41-202ENST00000394013 OR1L6Q8NGR2 347 aa11.13□□□□□ -0.63
RNF41-202ENST00000394013 FAM110DQ8TAY7 271 aaPredicted RBP11.13□□□□□ -0.63
RNF41-202ENST00000394013 GNB4Q9HAV0 340 aa11.13□□□□□ -0.63
RNF41-202ENST00000394013 TRAPPC1Q9Y5R8 145 aa11.13□□□□□ -0.63
RNF41-202ENST00000394013 LY96Q9Y6Y9 160 aa11.13□□□□□ -0.63
RNF41-202ENST00000394013 GRIFINA4D1Z8 144 aa11.12□□□□□ -0.63
RNF41-202ENST00000394013 ZNF705GA8MUZ8 300 aaPredicted RBP11.12□□□□□ -0.63
RNF41-202ENST00000394013 IGLC2P0DOY2 106 aa11.12□□□□□ -0.63
RNF41-202ENST00000394013 HLA-DMBP28068 263 aa11.12□□□□□ -0.63
RNF41-202ENST00000394013 IER3P46695 156 aa11.12□□□□□ -0.63
RNF41-202ENST00000394013 CDX1P47902 265 aaPredicted RBP11.12□□□□□ -0.63
RNF41-202ENST00000394013 MRPL54Q6P161 138 aaKnown RBP11.12□□□□□ -0.63
RNF41-202ENST00000394013 STXBP6Q8NFX7 210 aa11.12□□□□□ -0.63
RNF41-202ENST00000394013 XKRY2A2RUG3 117 aa11.12□□□□□ -0.63
RNF41-202ENST00000394013 HIST1H1EP10412 219 aaKnown RBP11.12□□□□□ -0.63
RNF41-202ENST00000394013 FABP4P15090 132 aa11.12□□□□□ -0.63
RNF41-202ENST00000394013 UBE2G1P62253 170 aa11.12□□□□□ -0.63
RNF41-202ENST00000394013 RPEL1Q2QD12 228 aa11.12□□□□□ -0.63
RNF41-202ENST00000394013 CIARTQ8N365 385 aaPredicted RBP11.12□□□□□ -0.63
RNF41-202ENST00000394013 NUDT10Q8NFP7 164 aa11.12□□□□□ -0.63
RNF41-202ENST00000394013 NUDT11Q96G61 164 aa11.12□□□□□ -0.63
RNF41-202ENST00000394013 SELENOKQ9Y6D0 94 aa11.12□□□□□ -0.63
RNF41-202ENST00000394013 TRBV19A0A075B6N1 114 aa11.11□□□□□ -0.63
RNF41-202ENST00000394013 A0A096LNT2 108 aa11.11□□□□□ -0.63
RNF41-202ENST00000394013 RNF223E7ERA6 249 aa11.11□□□□□ -0.63
RNF41-202ENST00000394013 YPEL3P61236 119 aaPredicted RBP11.11□□□□□ -0.63
RNF41-202ENST00000394013 TMEM183BQ1AE95 376 aa11.11□□□□□ -0.63
RNF41-202ENST00000394013 TMEM95Q3KNT9 176 aa11.11□□□□□ -0.63
RNF41-202ENST00000394013 OR10D4PQ8NGN7 298 aa11.11□□□□□ -0.63
RNF41-202ENST00000394013 ZNF502Q8TBZ5 544 aa11.11□□□□□ -0.63
RNF41-202ENST00000394013 ITPR3Q14573 2671 aa11.11□□□□□ -0.63
RNF41-202ENST00000394013 NUPR1O60356 82 aa11.11□□□□□ -0.63
RNF41-202ENST00000394013 IGLV2-11P01706 119 aa11.11□□□□□ -0.63
RNF41-202ENST00000394013 APOHP02749 345 aaPredicted RBP11.11□□□□□ -0.63
RNF41-202ENST00000394013 SIGLEC15Q6ZMC9 328 aa11.11□□□□□ -0.63
RNF41-202ENST00000394013 ATG101Q9BSB4 218 aa11.11□□□□□ -0.63
RNF41-202ENST00000394013 MOB4Q9Y3A3 225 aa11.11□□□□□ -0.63
RNF41-202ENST00000394013 CR1P17927 2039 aa11.1□□□□□ -0.63
RNF41-202ENST00000394013 F2Z2F3 143 aa11.1□□□□□ -0.63
RNF41-202ENST00000394013 TRBV12-3P01733 135 aa11.1□□□□□ -0.63
RNF41-202ENST00000394013 TAS2R60P59551 318 aa11.1□□□□□ -0.63
RNF41-202ENST00000394013 KIAA1644Q3SXP7 199 aa11.1□□□□□ -0.63
RNF41-202ENST00000394013 PRNTQ86SH4 94 aa11.1□□□□□ -0.63
RNF41-202ENST00000394013 BPIFA4PQ86YQ2 179 aa11.1□□□□□ -0.63
RNF41-202ENST00000394013 C5orf17Q8NAS9 161 aa11.1□□□□□ -0.63
RNF41-202ENST00000394013 OSTCQ9NRP0 149 aa11.1□□□□□ -0.63
RNF41-202ENST00000394013 THYN1Q9P016 225 aa11.1□□□□□ -0.63
RNF41-202ENST00000394013 TMEM14CQ9P0S9 112 aa11.1□□□□□ -0.63
RNF41-202ENST00000394013 SMAD5-AS1Q9Y6J3 95 aa11.1□□□□□ -0.63
RNF41-202ENST00000394013 ZNF785A8K8V0 405 aa11.1□□□□□ -0.63
RNF41-202ENST00000394013 TOMM20LQ6UXN7 152 aa11.1□□□□□ -0.63
RNF41-202ENST00000394013 TMEM68Q96MH6 324 aa11.1□□□□□ -0.63
RNF41-202ENST00000394013 TRBV9A0A0B4J1U6 114 aa11.09□□□□□ -0.63
RNF41-202ENST00000394013 B4DSR2 109 aa11.09□□□□□ -0.63
RNF41-202ENST00000394013 TMEM256Q8N2U0 113 aa11.09□□□□□ -0.63
RNF41-202ENST00000394013 ITPR2Q14571 2701 aa11.09□□□□□ -0.63
RNF41-202ENST00000394013 TRAV41A0A0B4J266 112 aa11.09□□□□□ -0.63
RNF41-202ENST00000394013 TGFAP01135 160 aa11.09□□□□□ -0.63
RNF41-202ENST00000394013 GZMBP10144 247 aa11.09□□□□□ -0.63
RNF41-202ENST00000394013 PYY3Q5JQD4 70 aa11.09□□□□□ -0.63
RNF41-202ENST00000394013 OR4F17Q8NGA8 305 aa11.09□□□□□ -0.63
RNF41-202ENST00000394013 MEGF9Q9H1U4 602 aa11.09□□□□□ -0.63
RNF41-202ENST00000394013 KLK15Q9H2R5 256 aa11.09□□□□□ -0.63
RNF41-202ENST00000394013 OTORQ9NRC9 128 aa11.09□□□□□ -0.63
RNF41-202ENST00000394013 KLF12Q9Y4X4 402 aa11.09□□□□□ -0.63
RNF41-202ENST00000394013 TRAV30A0A087WSZ9 112 aa11.08□□□□□ -0.64
RNF41-202ENST00000394013 TCF24Q7RTU0 167 aa11.08□□□□□ -0.64
RNF41-202ENST00000394013 HIST1H2BLQ99880 126 aa11.08□□□□□ -0.64
RNF41-202ENST00000394013 MLST8Q9BVC4 326 aa11.08□□□□□ -0.64
RNF41-202ENST00000394013 SNURFLB1AK76 121 aa11.08□□□□□ -0.64
RNF41-202ENST00000394013 IGHV3-11P01762 117 aa11.08□□□□□ -0.64
RNF41-202ENST00000394013 FABP1P07148 127 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms