RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 PPIAL4EA0A075B759 164 aa14.15□□□□□ -0.14
SQSTM1-202ENST00000389805 TMEM178BH3BS89 294 aa14.15□□□□□ -0.14
SQSTM1-202ENST00000389805 PPIAL4FP0DN26 164 aa14.15□□□□□ -0.14
SQSTM1-202ENST00000389805 GTF2H5Q6ZYL4 71 aa14.15□□□□□ -0.14
SQSTM1-202ENST00000389805 NPIPB3Q92617 1050 aa14.15□□□□□ -0.14
SQSTM1-202ENST00000389805 C19orf24Q9BVV8 132 aa14.15□□□□□ -0.14
SQSTM1-202ENST00000389805 MS4A6AQ9H2W1 248 aa14.15□□□□□ -0.14
SQSTM1-202ENST00000389805 PRNDQ9UKY0 176 aa14.15□□□□□ -0.14
SQSTM1-202ENST00000389805 GNG7O60262 68 aa14.15□□□□□ -0.14
SQSTM1-202ENST00000389805 ORM2P19652 201 aa14.15□□□□□ -0.14
SQSTM1-202ENST00000389805 UFSP1Q6NVU6 142 aa14.15□□□□□ -0.14
SQSTM1-202ENST00000389805 FXYD5Q96DB9 178 aa14.15□□□□□ -0.14
SQSTM1-202ENST00000389805 ZNF714Q96N38 554 aa14.15□□□□□ -0.14
SQSTM1-202ENST00000389805 MRPL32Q9BYC8 188 aaKnown RBP14.15□□□□□ -0.14
SQSTM1-202ENST00000389805 EPDR1Q9UM22 224 aa14.15□□□□□ -0.14
SQSTM1-202ENST00000389805 CSMD1Q96PZ7 3565 aa14.15□□□□□ -0.14
SQSTM1-202ENST00000389805 ATRXP46100 2492 aa14.15□□□□□ -0.15
SQSTM1-202ENST00000389805 A8MWL6 223 aa14.14□□□□□ -0.15
SQSTM1-202ENST00000389805 FAM87AP0C7U9 286 aa14.14□□□□□ -0.15
SQSTM1-202ENST00000389805 S100A7AQ86SG5 101 aa14.14□□□□□ -0.15
SQSTM1-202ENST00000389805 ASCL2Q99929 193 aa14.14□□□□□ -0.15
SQSTM1-202ENST00000389805 CTSZQ9UBR2 303 aa14.14□□□□□ -0.15
SQSTM1-202ENST00000389805 RABAC1Q9UI14 185 aa14.14□□□□□ -0.15
SQSTM1-202ENST00000389805 POU2AF1Q16633 256 aa14.14□□□□□ -0.15
SQSTM1-202ENST00000389805 DAZAP1Q96EP5 407 aaKnown RBP14.14□□□□□ -0.15
SQSTM1-202ENST00000389805 HSPB8Q9UJY1 196 aa14.14□□□□□ -0.15
SQSTM1-202ENST00000389805 FNDC10F2Z333 226 aa14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 APOHP02749 345 aaPredicted RBP14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 FXYD7P58549 80 aa14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 LINC00305Q7Z4B0 112 aa14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 PDPNQ86YL7 162 aa14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 OR8A1Q8NGG7 326 aa14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 HARBI1Q96MB7 349 aa14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 ZNF257Q9Y2Q1 563 aa14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 CHTOPQ9Y3Y2 248 aaKnown RBP14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 TRAV8-1A0A0A6YYK1 113 aa14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 TM4SF20Q53R12 229 aa14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 GPR82Q96P67 336 aa14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 SCNM1Q9BWG6 230 aa14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 SPTAN1Q13813 2472 aaKnown RBP14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 C2orf83Q53S99 150 aa14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 C10orf55Q5SWW7 151 aa14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 LINC01545Q5VT33 79 aa14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 PRSS57Q6UWY2 283 aa14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 RNASE6Q93091 150 aaKnown RBP14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 JKAMPQ9P055 326 aa14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 MRPL36Q9P0J6 103 aaKnown RBP14.13□□□□□ -0.15
SQSTM1-202ENST00000389805 MALRD1Q5VYJ5 2156 aa14.12□□□□□ -0.15
SQSTM1-202ENST00000389805 C9orf118A6NHY6 69 aa14.12□□□□□ -0.15
SQSTM1-202ENST00000389805 E7EQL1 145 aa14.12□□□□□ -0.15
SQSTM1-202ENST00000389805 KIR3DS1Q14943 382 aa14.12□□□□□ -0.15
SQSTM1-202ENST00000389805 ZNF833PQ6ZTB9 187 aa14.12□□□□□ -0.15
SQSTM1-202ENST00000389805 OR10AG1Q8NH19 301 aa14.12□□□□□ -0.15
SQSTM1-202ENST00000389805 OR4A5Q8NH83 315 aa14.12□□□□□ -0.15
SQSTM1-202ENST00000389805 PRSS47A8MTI9 375 aa14.12□□□□□ -0.15
SQSTM1-202ENST00000389805 LYNX1G3V0Z9 82 aa14.12□□□□□ -0.15
SQSTM1-202ENST00000389805 FAM106CPP0CH98 169 aa14.12□□□□□ -0.15
SQSTM1-202ENST00000389805 LYNX1P0DP58 116 aa14.12□□□□□ -0.15
SQSTM1-202ENST00000389805 FAM106AQ4KMX7 169 aa14.12□□□□□ -0.15
SQSTM1-202ENST00000389805 OR2K2Q8NGT1 345 aa14.12□□□□□ -0.15
SQSTM1-202ENST00000389805 NEU4Q8WWR8 484 aaPredicted RBP14.12□□□□□ -0.15
SQSTM1-202ENST00000389805 TMEM186Q96B77 213 aa14.12□□□□□ -0.15
SQSTM1-202ENST00000389805 A0A0G2JLM5 398 aa14.11□□□□□ -0.15
SQSTM1-202ENST00000389805 SEC11AP67812 179 aa14.11□□□□□ -0.15
SQSTM1-202ENST00000389805 RBPMS2Q6ZRY4 209 aaKnown RBP14.11□□□□□ -0.15
SQSTM1-202ENST00000389805 OR10X1Q8NGY0 326 aa14.11□□□□□ -0.15
SQSTM1-202ENST00000389805 RITA1Q96K30 269 aa14.11□□□□□ -0.15
SQSTM1-202ENST00000389805 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.11□□□□□ -0.15
SQSTM1-202ENST00000389805 SHISA9B4DS77 424 aa14.11□□□□□ -0.15
SQSTM1-202ENST00000389805 RPL24P83731 157 aaKnown RBP14.11□□□□□ -0.15
SQSTM1-202ENST00000389805 CIARTQ8N365 385 aaPredicted RBP14.11□□□□□ -0.15
SQSTM1-202ENST00000389805 DYNLRB1Q9NP97 96 aa14.11□□□□□ -0.15
SQSTM1-202ENST00000389805 THYN1Q9P016 225 aa14.11□□□□□ -0.15
SQSTM1-202ENST00000389805 SVEP1Q4LDE5 3571 aa14.1□□□□□ -0.15
SQSTM1-202ENST00000389805 IGHV3-72A0A0B4J1Y9 119 aa14.1□□□□□ -0.15
SQSTM1-202ENST00000389805 FLYWCH2Q96CP2 140 aaKnown RBP14.1□□□□□ -0.15
SQSTM1-202ENST00000389805 TPPP3Q9BW30 176 aa14.1□□□□□ -0.15
SQSTM1-202ENST00000389805 LOC389332A0A1B0GUA5 103 aa14.1□□□□□ -0.15
SQSTM1-202ENST00000389805 K7EP34 96 aa14.1□□□□□ -0.15
SQSTM1-202ENST00000389805 NDUFB3O43676 98 aa14.1□□□□□ -0.15
SQSTM1-202ENST00000389805 AP5S1Q9NUS5 200 aa14.1□□□□□ -0.15
SQSTM1-202ENST00000389805 FBLL1A6NHQ2 334 aaKnown RBP14.1□□□□□ -0.15
SQSTM1-202ENST00000389805 COL8A1P27658 744 aa14.1□□□□□ -0.15
SQSTM1-202ENST00000389805 NHLH1Q02575 133 aa14.1□□□□□ -0.15
SQSTM1-202ENST00000389805 MEF2CQ06413 473 aaPredicted RBP14.1□□□□□ -0.15
SQSTM1-202ENST00000389805 PERPQ96FX8 193 aa14.1□□□□□ -0.15
SQSTM1-202ENST00000389805 ZNF747Q9BV97 191 aa14.1□□□□□ -0.15
SQSTM1-202ENST00000389805 IGHV3-21A0A0B4J1V1 117 aa14.09□□□□□ -0.15
SQSTM1-202ENST00000389805 RUSC1-AS1Q66K80 236 aa14.09□□□□□ -0.15
SQSTM1-202ENST00000389805 OR5AN1Q8NGI8 311 aa14.09□□□□□ -0.15
SQSTM1-202ENST00000389805 PRSS3P2Q8NHM4 247 aa14.09□□□□□ -0.15
SQSTM1-202ENST00000389805 NDFIP1Q9BT67 221 aa14.09□□□□□ -0.15
SQSTM1-202ENST00000389805 PRSS22Q9GZN4 317 aa14.09□□□□□ -0.15
SQSTM1-202ENST00000389805 F11RQ9Y624 299 aaKnown RBP14.09□□□□□ -0.15
SQSTM1-202ENST00000389805 H3BRM9 83 aa14.09□□□□□ -0.15
SQSTM1-202ENST00000389805 LOXP28300 417 aaPredicted RBP14.09□□□□□ -0.15
SQSTM1-202ENST00000389805 PLP1P60201 277 aa14.09□□□□□ -0.15
SQSTM1-202ENST00000389805 LOXL1Q08397 574 aaPredicted RBP14.09□□□□□ -0.15
SQSTM1-202ENST00000389805 LINC01560Q8TB33 94 aa14.09□□□□□ -0.15
SQSTM1-202ENST00000389805 MLST8Q9BVC4 326 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms