RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 M0R381 172 aa11.59□□□□□ -0.55
RTF1-201ENST00000389629 IGKCP01834 107 aa11.59□□□□□ -0.55
RTF1-201ENST00000389629 FAM71F2Q6NXP2 309 aa11.59□□□□□ -0.55
RTF1-201ENST00000389629 Q6ZR03 302 aa11.59□□□□□ -0.55
RTF1-201ENST00000389629 ABCA4P78363 2273 aa11.58□□□□□ -0.56
RTF1-201ENST00000389629 C9orf118A6NHY6 69 aa11.58□□□□□ -0.56
RTF1-201ENST00000389629 FAM90A27PA6NNH2 459 aa11.58□□□□□ -0.56
RTF1-201ENST00000389629 CD3EP07766 207 aa11.58□□□□□ -0.56
RTF1-201ENST00000389629 HTN1P15515 57 aa11.58□□□□□ -0.56
RTF1-201ENST00000389629 SCGB3A1Q96QR1 104 aa11.58□□□□□ -0.56
RTF1-201ENST00000389629 RAXQ9Y2V3 346 aa11.58□□□□□ -0.56
RTF1-201ENST00000389629 CFHR2P36980 270 aa11.58□□□□□ -0.56
RTF1-201ENST00000389629 ZNF134P52741 427 aa11.58□□□□□ -0.56
RTF1-201ENST00000389629 DLX6P56179 175 aa11.58□□□□□ -0.56
RTF1-201ENST00000389629 TSSC4Q9Y5U2 329 aaPredicted RBP11.58□□□□□ -0.56
RTF1-201ENST00000389629 DOPEY2Q9Y3R5 2298 aa11.57□□□□□ -0.56
RTF1-201ENST00000389629 TMEM170BQ5T4T1 132 aa11.57□□□□□ -0.56
RTF1-201ENST00000389629 PHLDA3Q9Y5J5 127 aa11.57□□□□□ -0.56
RTF1-201ENST00000389629 ETDBQ3ZM63 59 aa11.57□□□□□ -0.56
RTF1-201ENST00000389629 DEFB125Q8N687 156 aa11.57□□□□□ -0.56
RTF1-201ENST00000389629 TMEM14BQ9NUH8 114 aa11.57□□□□□ -0.56
RTF1-201ENST00000389629 ZC2HC1BQ5TFG8 222 aa11.57□□□□□ -0.56
RTF1-201ENST00000389629 C8orf46Q8TAG6 207 aa11.57□□□□□ -0.56
RTF1-201ENST00000389629 F2RL2O00254 374 aa11.57□□□□□ -0.56
RTF1-201ENST00000389629 COX8AP10176 69 aa11.57□□□□□ -0.56
RTF1-201ENST00000389629 C16orf92Q96LL3 132 aa11.57□□□□□ -0.56
RTF1-201ENST00000389629 CSTL1Q9H114 145 aa11.57□□□□□ -0.56
RTF1-201ENST00000389629 ACACAQ13085 2346 aa11.56□□□□□ -0.56
RTF1-201ENST00000389629 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.56□□□□□ -0.56
RTF1-201ENST00000389629 H3BRM9 83 aa11.56□□□□□ -0.56
RTF1-201ENST00000389629 SNCGO76070 127 aa11.56□□□□□ -0.56
RTF1-201ENST00000389629 MDS2Q8NDY4 140 aa11.56□□□□□ -0.56
RTF1-201ENST00000389629 ANAPC13Q9BS18 74 aa11.56□□□□□ -0.56
RTF1-201ENST00000389629 TP73-AS1Q9UF72 201 aa11.56□□□□□ -0.56
RTF1-201ENST00000389629 C15orf65H3BRN8 121 aa11.56□□□□□ -0.56
RTF1-201ENST00000389629 IGHV1-46P01743 117 aa11.56□□□□□ -0.56
RTF1-201ENST00000389629 MEF2CQ06413 473 aaPredicted RBP11.55□□□□□ -0.56
RTF1-201ENST00000389629 TNCP24821 2201 aa11.55□□□□□ -0.56
RTF1-201ENST00000389629 CLEC2AQ6UVW9 174 aa11.55□□□□□ -0.56
RTF1-201ENST00000389629 SLC25A2Q9BXI2 301 aa11.55□□□□□ -0.56
RTF1-201ENST00000389629 HOXA3O43365 443 aaPredicted RBP11.55□□□□□ -0.56
RTF1-201ENST00000389629 RNF125Q96EQ8 232 aa11.55□□□□□ -0.56
RTF1-201ENST00000389629 JMJD8Q96S16 334 aa11.55□□□□□ -0.56
RTF1-201ENST00000389629 TOMM40O96008 361 aa11.55□□□□□ -0.56
RTF1-201ENST00000389629 EMP1P54849 157 aa11.55□□□□□ -0.56
RTF1-201ENST00000389629 PRR14LQ5THK1 2151 aa11.55□□□□□ -0.56
RTF1-201ENST00000389629 NUP210LQ5VU65 1888 aa11.55□□□□□ -0.56
RTF1-201ENST00000389629 IGKV2-40A0A087WW87 121 aaPredicted RBP11.54□□□□□ -0.56
RTF1-201ENST00000389629 K7EP34 96 aa11.54□□□□□ -0.56
RTF1-201ENST00000389629 IGKV2D-40P01614 121 aaPredicted RBP11.54□□□□□ -0.56
RTF1-201ENST00000389629 IGKV3-15P01624 115 aa11.54□□□□□ -0.56
RTF1-201ENST00000389629 LGALS3P17931 250 aaKnown RBP11.54□□□□□ -0.56
RTF1-201ENST00000389629 CYSLTR1Q9Y271 337 aa11.54□□□□□ -0.56
RTF1-201ENST00000389629 ARFGEF3Q5TH69 2177 aa11.54□□□□□ -0.56
RTF1-201ENST00000389629 TRAV8-2A0A0B4J237 113 aa11.54□□□□□ -0.56
RTF1-201ENST00000389629 TMEM213A2RRL7 107 aa11.54□□□□□ -0.56
RTF1-201ENST00000389629 TMEM249Q2WGJ8 235 aa11.54□□□□□ -0.56
RTF1-201ENST00000389629 CHAC1Q9BUX1 264 aa11.54□□□□□ -0.56
RTF1-201ENST00000389629 SLC25A39Q9BZJ4 359 aaPredicted RBP11.54□□□□□ -0.56
RTF1-201ENST00000389629 RAB1BQ9H0U4 201 aa11.54□□□□□ -0.56
RTF1-201ENST00000389629 PRR20EP86478 221 aa11.54□□□□□ -0.56
RTF1-201ENST00000389629 PRR20CP86479 221 aa11.54□□□□□ -0.56
RTF1-201ENST00000389629 PRR20DP86480 221 aa11.54□□□□□ -0.56
RTF1-201ENST00000389629 PRR20BP86481 221 aa11.54□□□□□ -0.56
RTF1-201ENST00000389629 PRR20AP86496 221 aa11.54□□□□□ -0.56
RTF1-201ENST00000389629 DUX4L9Q6RFH8 374 aaPredicted RBP11.54□□□□□ -0.56
RTF1-201ENST00000389629 TAX1BP3O14907 124 aa11.53□□□□□ -0.56
RTF1-201ENST00000389629 Q8TAT8 98 aa11.53□□□□□ -0.56
RTF1-201ENST00000389629 DEFB104AQ8WTQ1 72 aa11.53□□□□□ -0.56
RTF1-201ENST00000389629 ZNF256Q9Y2P7 627 aaPredicted RBP11.53□□□□□ -0.56
RTF1-201ENST00000389629 FNDC10F2Z333 226 aa11.53□□□□□ -0.56
RTF1-201ENST00000389629 NDUFB8O95169 186 aa11.53□□□□□ -0.56
RTF1-201ENST00000389629 AZU1P20160 251 aa11.53□□□□□ -0.56
RTF1-201ENST00000389629 EML6Q6ZMW3 1958 aa11.53□□□□□ -0.56
RTF1-201ENST00000389629 PPP1R27Q86WC6 154 aa11.53□□□□□ -0.56
RTF1-201ENST00000389629 WFDC12Q8WWY7 111 aa11.53□□□□□ -0.56
RTF1-201ENST00000389629 NXT2Q9NPJ8 142 aaKnown RBP11.53□□□□□ -0.56
RTF1-201ENST00000389629 MED12LQ86YW9 2145 aa11.53□□□□□ -0.56
RTF1-201ENST00000389629 C17orf100A8MU93 164 aa11.53□□□□□ -0.56
RTF1-201ENST00000389629 K7ERJ3 54 aa11.53□□□□□ -0.56
RTF1-201ENST00000389629 FAM231DQ6ZW35 169 aa11.53□□□□□ -0.56
RTF1-201ENST00000389629 Q86TA4 180 aa11.53□□□□□ -0.56
RTF1-201ENST00000389629 FABP5P3A8MUU1 101 aa11.52□□□□□ -0.56
RTF1-201ENST00000389629 H0YJW9 148 aa11.52□□□□□ -0.56
RTF1-201ENST00000389629 PSMG4Q5JS54 123 aa11.52□□□□□ -0.56
RTF1-201ENST00000389629 TEX29Q8N6K0 151 aa11.52□□□□□ -0.56
RTF1-201ENST00000389629 ZNF883P0CG24 379 aa11.52□□□□□ -0.57
RTF1-201ENST00000389629 IGFL4Q6B9Z1 124 aa11.52□□□□□ -0.57
RTF1-201ENST00000389629 PLSCR4Q9NRQ2 329 aa11.52□□□□□ -0.57
RTF1-201ENST00000389629 A0A0C4DFX4 3053 aa11.52□□□□□ -0.57
RTF1-201ENST00000389629 SP9P0CG40 484 aa11.52□□□□□ -0.57
RTF1-201ENST00000389629 RBX1P62877 108 aa11.52□□□□□ -0.57
RTF1-201ENST00000389629 FAM74A4Q5TZK3 123 aa11.52□□□□□ -0.57
RTF1-201ENST00000389629 C1RLQ9NZP8 487 aa11.52□□□□□ -0.57
RTF1-201ENST00000389629 TP53TG3Q9ULZ0 132 aa11.52□□□□□ -0.57
RTF1-201ENST00000389629 SLC25A15Q9Y619 301 aa11.52□□□□□ -0.57
RTF1-201ENST00000389629 GAFA1Q96PS6 74 aa11.51□□□□□ -0.57
RTF1-201ENST00000389629 A0A1W2PPM0 123 aa11.51□□□□□ -0.57
RTF1-201ENST00000389629 DGAT2L7PQ6IED9 249 aa11.51□□□□□ -0.57
RTF1-201ENST00000389629 C11orf53Q8IXP5 236 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms