RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 TM4SF20Q53R12 229 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 C10orf113Q5VZT2 155 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 STXBP6Q8NFX7 210 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 TSSC4Q9Y5U2 329 aaPredicted RBP10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 KLK10O43240 276 aa10.03□□□□□ -0.8
PRPF40B-202ENST00000380281 LINC00305Q7Z4B0 112 aa10.03□□□□□ -0.8
PRPF40B-202ENST00000380281 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.03□□□□□ -0.88e-6■■■■□ 21.9
PRPF40B-202ENST00000380281 HIGD1CA8MV81 97 aa10.03□□□□□ -0.8
PRPF40B-202ENST00000380281 VWC2LB2RUY7 222 aa10.03□□□□□ -0.8
PRPF40B-202ENST00000380281 CRXO43186 299 aaPredicted RBP10.03□□□□□ -0.8
PRPF40B-202ENST00000380281 FAM215AQ9Y5M1 114 aa10.03□□□□□ -0.8
PRPF40B-202ENST00000380281 COX7A1P24310 79 aa10.02□□□□□ -0.8
PRPF40B-202ENST00000380281 CKS1BP61024 79 aa10.02□□□□□ -0.8
PRPF40B-202ENST00000380281 CD69Q07108 199 aa10.02□□□□□ -0.8
PRPF40B-202ENST00000380281 KLF5Q13887 457 aaPredicted RBP10.02□□□□□ -0.8
PRPF40B-202ENST00000380281 PGLYRP4Q96LB8 373 aa10.02□□□□□ -0.8
PRPF40B-202ENST00000380281 SMPXQ9UHP9 88 aa10.02□□□□□ -0.8
PRPF40B-202ENST00000380281 KIR2DS2P43631 304 aa10.02□□□□□ -0.81
PRPF40B-202ENST00000380281 HSD52Q0P140 79 aa10.02□□□□□ -0.81
PRPF40B-202ENST00000380281 RPUSD1Q9UJJ7 312 aaKnown RBP10.02□□□□□ -0.81
PRPF40B-202ENST00000380281 DSCAML1Q8TD84 2053 aa10.02□□□□□ -0.81
PRPF40B-202ENST00000380281 hADV38S2A0JD32 116 aa10.02□□□□□ -0.81
PRPF40B-202ENST00000380281 FAM87AP0C7U9 286 aa10.02□□□□□ -0.81
PRPF40B-202ENST00000380281 TMPRSS3P57727 454 aa10.02□□□□□ -0.81
PRPF40B-202ENST00000380281 GUSBP1Q15486 140 aa10.02□□□□□ -0.81
PRPF40B-202ENST00000380281 PLA2G2CQ5R387 149 aa10.02□□□□□ -0.81
PRPF40B-202ENST00000380281 MAP1LC3CQ9BXW4 147 aa10.02□□□□□ -0.81
PRPF40B-202ENST00000380281 RABAC1Q9UI14 185 aa10.02□□□□□ -0.81
PRPF40B-202ENST00000380281 SSUH2Q9Y2M2 353 aa10.02□□□□□ -0.81
PRPF40B-202ENST00000380281 CREBBPQ92793 2442 aa10.01□□□□□ -0.81
PRPF40B-202ENST00000380281 TRGV8A0A0C4DH27 118 aa10.01□□□□□ -0.81
PRPF40B-202ENST00000380281 CD40P25942 277 aa10.01□□□□□ -0.81
PRPF40B-202ENST00000380281 SEC11AP67812 179 aa10.01□□□□□ -0.81
PRPF40B-202ENST00000380281 OR1L8Q8NGR8 309 aa10.01□□□□□ -0.81
PRPF40B-202ENST00000380281 SLC25A2Q9BXI2 301 aa10.01□□□□□ -0.81
PRPF40B-202ENST00000380281 CGB3P0DN86 165 aa10.01□□□□□ -0.81
PRPF40B-202ENST00000380281 CGB7P0DN87 165 aa10.01□□□□□ -0.81
PRPF40B-202ENST00000380281 PATE2Q6UY27 113 aa10.01□□□□□ -0.81
PRPF40B-202ENST00000380281 HLA-DRB1P01911 266 aa10□□□□□ -0.81
PRPF40B-202ENST00000380281 COX8AP10176 69 aa10□□□□□ -0.81
PRPF40B-202ENST00000380281 TMEM200BQ69YZ2 307 aa10□□□□□ -0.81
PRPF40B-202ENST00000380281 IGHV3OR16-8A0A075B7F1 116 aa10□□□□□ -0.81
PRPF40B-202ENST00000380281 H3BRM9 83 aa10□□□□□ -0.81
PRPF40B-202ENST00000380281 LHBP01229 141 aa10□□□□□ -0.81
PRPF40B-202ENST00000380281 TIMM23BQ5SRD1 257 aa10□□□□□ -0.81
PRPF40B-202ENST00000380281 C1orf162Q8NEQ5 155 aaPredicted RBP10□□□□□ -0.81
PRPF40B-202ENST00000380281 VSTM2AQ8TAG5 236 aa10□□□□□ -0.81
PRPF40B-202ENST00000380281 IGF2BP2-AS1Q96M15 143 aa10□□□□□ -0.81
PRPF40B-202ENST00000380281 ZNF714Q96N38 554 aa10□□□□□ -0.81
PRPF40B-202ENST00000380281 RAI1Q7Z5J4 1906 aaPredicted RBP10□□□□□ -0.81
PRPF40B-202ENST00000380281 TMSB15BA0A087X1C1 80 aa10□□□□□ -0.81
PRPF40B-202ENST00000380281 NCR2O95944 276 aa10□□□□□ -0.81
PRPF40B-202ENST00000380281 LYZP61626 148 aa10□□□□□ -0.81
PRPF40B-202ENST00000380281 PLGLAQ15195 96 aa10□□□□□ -0.81
PRPF40B-202ENST00000380281 CCDC144NLQ6NUI1 221 aa10□□□□□ -0.81
PRPF40B-202ENST00000380281 NEU4Q8WWR8 484 aaPredicted RBP10□□□□□ -0.81
PRPF40B-202ENST00000380281 A0A1W2PPM0 123 aa9.99□□□□□ -0.81
PRPF40B-202ENST00000380281 GAGE12HA6NDE8 117 aa9.99□□□□□ -0.81
PRPF40B-202ENST00000380281 A6NDN8 102 aa9.99□□□□□ -0.81
PRPF40B-202ENST00000380281 PEX7O00628 323 aa9.99□□□□□ -0.81
PRPF40B-202ENST00000380281 LY6HO94772 140 aa9.99□□□□□ -0.81
PRPF40B-202ENST00000380281 LINC00322Q6ZN03 302 aaPredicted RBP9.99□□□□□ -0.81
PRPF40B-202ENST00000380281 SLC25A48Q6ZT89 311 aaKnown RBP9.99□□□□□ -0.81
PRPF40B-202ENST00000380281 FAM167A-AS1Q96KT0 104 aa9.99□□□□□ -0.81
PRPF40B-202ENST00000380281 DYNLRB1Q9NP97 96 aa9.99□□□□□ -0.81
PRPF40B-202ENST00000380281 RBP4P02753 201 aa9.99□□□□□ -0.81
PRPF40B-202ENST00000380281 BSPH1Q075Z2 132 aa9.99□□□□□ -0.81
PRPF40B-202ENST00000380281 PDPNQ86YL7 162 aa9.99□□□□□ -0.81
PRPF40B-202ENST00000380281 MBD6Q96DN6 1003 aa9.99□□□□□ -0.81
PRPF40B-202ENST00000380281 ADTRPQ96IZ2 230 aa9.99□□□□□ -0.81
PRPF40B-202ENST00000380281 IGHV3-35A0A0C4DH35 117 aa9.98□□□□□ -0.81
PRPF40B-202ENST00000380281 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.98□□□□□ -0.81
PRPF40B-202ENST00000380281 DLL1O00548 723 aa9.98□□□□□ -0.81
PRPF40B-202ENST00000380281 MC5RP33032 325 aa9.98□□□□□ -0.81
PRPF40B-202ENST00000380281 FXYD7P58549 80 aa9.98□□□□□ -0.81
PRPF40B-202ENST00000380281 EXOC3-AS1Q8N2X6 119 aa9.98□□□□□ -0.81
PRPF40B-202ENST00000380281 WIPF2Q8TF74 440 aaPredicted RBP9.98□□□□□ -0.81
PRPF40B-202ENST00000380281 FCN3O75636 299 aa9.98□□□□□ -0.81
PRPF40B-202ENST00000380281 F11RQ9Y624 299 aaKnown RBP9.98□□□□□ -0.81
PRPF40B-202ENST00000380281 COL27A1Q8IZC6 1860 aaPredicted RBP9.98□□□□□ -0.81
PRPF40B-202ENST00000380281 A0A1W2PPI3 338 aa9.98□□□□□ -0.81
PRPF40B-202ENST00000380281 FAM90A9PA6NNJ1 464 aa9.98□□□□□ -0.81
PRPF40B-202ENST00000380281 CIARTQ8N365 385 aaPredicted RBP9.98□□□□□ -0.81
PRPF40B-202ENST00000380281 MS4A6AQ9H2W1 248 aa9.98□□□□□ -0.81
PRPF40B-202ENST00000380281 OR2J3O76001 311 aa9.97□□□□□ -0.81
PRPF40B-202ENST00000380281 KLF17Q5JT82 389 aaPredicted RBP9.97□□□□□ -0.81
PRPF40B-202ENST00000380281 PRNTQ86SH4 94 aa9.97□□□□□ -0.81
PRPF40B-202ENST00000380281 MTURNQ8N3F0 131 aa9.97□□□□□ -0.81
PRPF40B-202ENST00000380281 TMUB1Q9BVT8 246 aa9.97□□□□□ -0.81
PRPF40B-202ENST00000380281 PSMB11A5LHX3 300 aa9.97□□□□□ -0.81
PRPF40B-202ENST00000380281 K7EQM0 130 aa9.97□□□□□ -0.81
PRPF40B-202ENST00000380281 NDUFB3O43676 98 aa9.97□□□□□ -0.81
PRPF40B-202ENST00000380281 TMEM177Q53S58 311 aa9.97□□□□□ -0.81
PRPF40B-202ENST00000380281 ADAMTSL5Q6ZMM2 481 aa9.97□□□□□ -0.81
PRPF40B-202ENST00000380281 DAZAP1Q96EP5 407 aaKnown RBP9.97□□□□□ -0.81
PRPF40B-202ENST00000380281 K7EMI3 77 aa9.96□□□□□ -0.81
PRPF40B-202ENST00000380281 FABP2P12104 132 aa9.96□□□□□ -0.81
PRPF40B-202ENST00000380281 FCGR2BP31994 310 aaPredicted RBP9.96□□□□□ -0.81
PRPF40B-202ENST00000380281 C2orf83Q53S99 150 aa9.96□□□□□ -0.81
PRPF40B-202ENST00000380281 ZNF329Q86UD4 541 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms