RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CNN1P51911 297 aaKnown RBP12.44□□□□□ -0.42
PDLIM4-202ENST00000379018 DLK1P80370 383 aa12.44□□□□□ -0.42
PDLIM4-202ENST00000379018 FGL1Q08830 312 aa12.44□□□□□ -0.42
PDLIM4-202ENST00000379018 SSX7Q7RTT5 188 aa12.44□□□□□ -0.42
PDLIM4-202ENST00000379018 OR11H7Q8NGC8 314 aa12.44□□□□□ -0.42
PDLIM4-202ENST00000379018 RNF141Q8WVD5 230 aa12.44□□□□□ -0.42
PDLIM4-202ENST00000379018 RGS5O15539 181 aa12.43□□□□□ -0.42
PDLIM4-202ENST00000379018 ATP5G1P05496 136 aa12.43□□□□□ -0.42
PDLIM4-202ENST00000379018 PRB4P10163 310 aaPredicted RBP12.43□□□□□ -0.42
PDLIM4-202ENST00000379018 AZU1P20160 251 aa12.43□□□□□ -0.42
PDLIM4-202ENST00000379018 ATP5G3P48201 142 aa12.43□□□□□ -0.42
PDLIM4-202ENST00000379018 MEOX2P50222 304 aa12.43□□□□□ -0.42
PDLIM4-202ENST00000379018 KRTAP10-2P60368 255 aa12.43□□□□□ -0.42
PDLIM4-202ENST00000379018 RNF182Q8N6D2 247 aa12.43□□□□□ -0.42
PDLIM4-202ENST00000379018 FABP12A6NFH5 140 aa12.42□□□□□ -0.42
PDLIM4-202ENST00000379018 DISC1C4P0D8 188 aa12.42□□□□□ -0.42
PDLIM4-202ENST00000379018 IL7P13232 177 aa12.42□□□□□ -0.42
PDLIM4-202ENST00000379018 SMCO1Q147U7 214 aa12.42□□□□□ -0.42
PDLIM4-202ENST00000379018 SAMD13Q5VXD3 122 aa12.42□□□□□ -0.42
PDLIM4-202ENST00000379018 OR1S1Q8NH92 325 aa12.42□□□□□ -0.42
PDLIM4-202ENST00000379018 UHRF2Q96PU4 802 aa12.42□□□□□ -0.42
PDLIM4-202ENST00000379018 LINC01587Q99440 93 aa12.42□□□□□ -0.42
PDLIM4-202ENST00000379018 SLC25A39Q9BZJ4 359 aaPredicted RBP12.42□□□□□ -0.42
PDLIM4-202ENST00000379018 HSPB7Q9UBY9 170 aa12.42□□□□□ -0.42
PDLIM4-202ENST00000379018 TMEM56-RWDD3S4R434 201 aa12.42□□□□□ -0.42
PDLIM4-202ENST00000379018 DNAH5Q8TE73 4624 aa12.42□□□□□ -0.42
PDLIM4-202ENST00000379018 CRXO43186 299 aaPredicted RBP12.41□□□□□ -0.42
PDLIM4-202ENST00000379018 DUSP14O95147 198 aaKnown RBP12.41□□□□□ -0.42
PDLIM4-202ENST00000379018 IAPPP10997 89 aa12.41□□□□□ -0.42
PDLIM4-202ENST00000379018 GPX4P36969 197 aaPredicted RBP12.41□□□□□ -0.42
PDLIM4-202ENST00000379018 CCR6P51684 374 aa12.41□□□□□ -0.42
PDLIM4-202ENST00000379018 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.41□□□□□ -0.42
PDLIM4-202ENST00000379018 DIRAS2Q96HU8 199 aa12.41□□□□□ -0.42
PDLIM4-202ENST00000379018 KRTAP1-5Q9BYS1 174 aa12.41□□□□□ -0.42
PDLIM4-202ENST00000379018 Q9H8V8 135 aa12.41□□□□□ -0.42
PDLIM4-202ENST00000379018 CACFD1Q9UGQ2 172 aa12.41□□□□□ -0.42
PDLIM4-202ENST00000379018 PLAC8L1A1L4L8 177 aa12.4□□□□□ -0.42
PDLIM4-202ENST00000379018 ORM2P19652 201 aa12.4□□□□□ -0.42
PDLIM4-202ENST00000379018 SURF2Q15527 256 aaPredicted RBP12.4□□□□□ -0.42
PDLIM4-202ENST00000379018 LYZL2Q7Z4W2 148 aa12.4□□□□□ -0.42
PDLIM4-202ENST00000379018 ZNF738Q8NE65 137 aa12.4□□□□□ -0.42
PDLIM4-202ENST00000379018 TRGV9Q99603 122 aa12.4□□□□□ -0.42
PDLIM4-202ENST00000379018 GPR132Q9UNW8 380 aa12.4□□□□□ -0.42
PDLIM4-202ENST00000379018 IGKV1OR2-108A0A075B7D4 117 aa12.39□□□□□ -0.43
PDLIM4-202ENST00000379018 ZNF98A6NK75 572 aa12.39□□□□□ -0.43
PDLIM4-202ENST00000379018 A8MTW9 85 aa12.39□□□□□ -0.43
PDLIM4-202ENST00000379018 BOLA2-SMG1P6H3BVE0 249 aa12.39□□□□□ -0.43
PDLIM4-202ENST00000379018 CTDSPLO15194 276 aa12.39□□□□□ -0.43
PDLIM4-202ENST00000379018 GATA2P23769 480 aaPredicted RBP12.39□□□□□ -0.43
PDLIM4-202ENST00000379018 RHOBP62745 196 aa12.39□□□□□ -0.43
PDLIM4-202ENST00000379018 HIST1H1AQ02539 215 aaPredicted RBP12.39□□□□□ -0.43
PDLIM4-202ENST00000379018 OR5I1Q13606 314 aa12.39□□□□□ -0.43
PDLIM4-202ENST00000379018 IL22RA2Q969J5 263 aa12.39□□□□□ -0.43
PDLIM4-202ENST00000379018 C17orf77Q96MU5 243 aa12.39□□□□□ -0.43
PDLIM4-202ENST00000379018 PPP1R14DQ9NXH3 145 aa12.39□□□□□ -0.43
PDLIM4-202ENST00000379018 KCNIP3Q9Y2W7 256 aa12.39□□□□□ -0.43
PDLIM4-202ENST00000379018 HERC1Q15751 4861 aa12.39□□□□□ -0.43
PDLIM4-202ENST00000379018 hCG_2014768A0A024R1R8 64 aa12.38□□□□□ -0.43
PDLIM4-202ENST00000379018 A0A0J9YY99 117 aa12.38□□□□□ -0.43
PDLIM4-202ENST00000379018 CBY3A6NI87 242 aa12.38□□□□□ -0.43
PDLIM4-202ENST00000379018 AKR1C4P17516 323 aa12.38□□□□□ -0.43
PDLIM4-202ENST00000379018 TSPOP30536 169 aa12.38□□□□□ -0.43
PDLIM4-202ENST00000379018 B2MP61769 119 aa12.38□□□□□ -0.43
PDLIM4-202ENST00000379018 RAB11AP62491 216 aa12.38□□□□□ -0.43
PDLIM4-202ENST00000379018 BAK1Q16611 211 aa12.38□□□□□ -0.43
PDLIM4-202ENST00000379018 OR51S1Q8NGJ8 323 aa12.38□□□□□ -0.43
PDLIM4-202ENST00000379018 OR1B1Q8NGR6 318 aa12.38□□□□□ -0.43
PDLIM4-202ENST00000379018 C15orf40Q8WUR7 153 aa12.38□□□□□ -0.43
PDLIM4-202ENST00000379018 TRAV8-2A0A0B4J237 113 aa12.37□□□□□ -0.43
PDLIM4-202ENST00000379018 A0A0B4J2A0 478 aa12.37□□□□□ -0.43
PDLIM4-202ENST00000379018 EPM2AB3EWF7 344 aa12.37□□□□□ -0.43
PDLIM4-202ENST00000379018 AKAIN1P0CW23 69 aa12.37□□□□□ -0.43
PDLIM4-202ENST00000379018 TTC32Q5I0X7 151 aa12.37□□□□□ -0.43
PDLIM4-202ENST00000379018 DEDD2Q8WXF8 326 aa12.37□□□□□ -0.43
PDLIM4-202ENST00000379018 TMEM147Q9BVK8 224 aa12.37□□□□□ -0.43
PDLIM4-202ENST00000379018 NOP10Q9NPE3 64 aaKnown RBP12.37□□□□□ -0.43
PDLIM4-202ENST00000379018 SHPKQ9UHJ6 478 aa12.37□□□□□ -0.43
PDLIM4-202ENST00000379018 TRAV26-1A0A087WT03 109 aa12.36□□□□□ -0.43
PDLIM4-202ENST00000379018 FUSP35637 526 aaKnown RBP eCLIP12.36□□□□□ -0.43
PDLIM4-202ENST00000379018 GGNBP1Q5YKI7 109 aa12.36□□□□□ -0.43
PDLIM4-202ENST00000379018 BPIFCQ8NFQ6 507 aa12.36□□□□□ -0.43
PDLIM4-202ENST00000379018 GNPNAT1Q96EK6 184 aaPredicted RBP12.36□□□□□ -0.43
PDLIM4-202ENST00000379018 C16orf74Q96GX8 76 aa12.36□□□□□ -0.43
PDLIM4-202ENST00000379018 PRRT1Q99946 306 aa12.36□□□□□ -0.43
PDLIM4-202ENST00000379018 TIMM8BQ9Y5J9 83 aaPredicted RBP12.36□□□□□ -0.43
PDLIM4-202ENST00000379018 AKR1C1Q04828 323 aa12.35□□□□□ -0.43
PDLIM4-202ENST00000379018 SSBP1Q04837 148 aaKnown RBP12.35□□□□□ -0.43
PDLIM4-202ENST00000379018 TMEM182Q6ZP80 229 aaPredicted RBP12.35□□□□□ -0.43
PDLIM4-202ENST00000379018 THAP8Q8NA92 274 aa12.35□□□□□ -0.43
PDLIM4-202ENST00000379018 TRIM63Q969Q1 353 aa12.35□□□□□ -0.43
PDLIM4-202ENST00000379018 MCUBQ9NWR8 336 aa12.35□□□□□ -0.43
PDLIM4-202ENST00000379018 ZNF586Q9NXT0 402 aa12.35□□□□□ -0.43
PDLIM4-202ENST00000379018 ATP5IP56385 69 aaPredicted RBP12.34□□□□□ -0.43
PDLIM4-202ENST00000379018 TAS2R60P59551 318 aa12.34□□□□□ -0.43
PDLIM4-202ENST00000379018 MRPS10P82664 201 aaKnown RBP12.34□□□□□ -0.43
PDLIM4-202ENST00000379018 TMEM144Q7Z5S9 345 aa12.34□□□□□ -0.43
PDLIM4-202ENST00000379018 SMIM4Q8WVI0 70 aa12.34□□□□□ -0.43
PDLIM4-202ENST00000379018 Q9H3A6 140 aa12.34□□□□□ -0.43
PDLIM4-202ENST00000379018 DMBT1Q9UGM3 2413 aaPredicted RBP12.33□□□□□ -0.43
PDLIM4-202ENST00000379018 CFDP00746 253 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms