RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 LIFP15018 202 aa7.26□□□□□ -1.25
LIG3-202ENST00000378526 SRSF7Q16629 238 aaKnown RBP eCLIP7.26□□□□□ -1.25
LIG3-202ENST00000378526 NTN5Q8WTR8 489 aaPredicted RBP7.26□□□□□ -1.25
LIG3-202ENST00000378526 GZMMP51124 257 aa7.26□□□□□ -1.25
LIG3-202ENST00000378526 TIAF1O95411 115 aa7.26□□□□□ -1.25
LIG3-202ENST00000378526 TET2Q6N021 2002 aaPredicted RBP7.26□□□□□ -1.25
LIG3-202ENST00000378526 Q6ZUT4 128 aa7.26□□□□□ -1.25
LIG3-202ENST00000378526 Q6ZVH6 145 aa7.26□□□□□ -1.25
LIG3-202ENST00000378526 DCTN5Q9BTE1 182 aa7.26□□□□□ -1.25
LIG3-202ENST00000378526 HELZP42694 1942 aaKnown RBP7.25□□□□□ -1.25
LIG3-202ENST00000378526 PSG4Q00888 419 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 C1QTNF5Q9BXJ0 243 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 FBXL7Q9UJT9 491 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 C16orf97H3BN30 126 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 LYZL1Q6UWQ5 148 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 NKAPP1Q8N9T2 125 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 XIRP1Q702N8 1843 aaKnown RBP7.25□□□□□ -1.25
LIG3-202ENST00000378526 KIR2DL5BA0A0G2JN68 375 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 KIR2DL5BA0A0G2JPC4 375 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 ZNF876PQ49A33 203 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 KIR2DL5AQ8N109 375 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 LINC00477Q96M19 166 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 ZNF319Q9P2F9 582 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 IGLC7A0M8Q6 106 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 F8VRH5 84 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 ZIC1Q15915 447 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 RASL10BQ96S79 203 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 IGHV3-72A0A0B4J1Y9 119 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 TRPT1Q86TN4 253 aaKnown RBP7.25□□□□□ -1.25
LIG3-202ENST00000378526 C2CD4DB7Z1M9 353 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 ANXA2RQ3ZCQ2 193 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 LY6G6FQ5SQ64 297 aa7.25□□□□□ -1.25
LIG3-202ENST00000378526 CFHR2P36980 270 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 ZFP2Q6ZN57 461 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 KCPQ6ZWJ8 1503 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 IGHV3-48P01763 117 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 FOXI1Q12951 378 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 PTCRAQ6ISU1 281 aaPredicted RBP7.24□□□□□ -1.25
LIG3-202ENST00000378526 PATE1Q8WXA2 126 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 GPHA2Q96T91 129 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 SLC25A16P16260 332 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 SIGLEC15Q6ZMC9 328 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 SLC25A47Q6Q0C1 308 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 RFLNBQ8N5W9 214 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 SCRT2Q9NQ03 307 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 C3orf22Q8N5N4 141 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 PLXNA1Q9UIW2 1896 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 ANAPC1Q9H1A4 1944 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 CT62P0C5K7 136 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 BTCP35070 178 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 C19orf48Q6RUI8 117 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 JMJD7-PLA2G4BH0Y9G9 81 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 IGLL1P15814 213 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 PDE6GP18545 87 aa7.24□□□□□ -1.25
LIG3-202ENST00000378526 TRAV12-2A0A075B6T6 113 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 TINCRA0A1B0GVN0 87 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 NDUFB1O75438 58 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 ZNF138P52744 262 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 TMEM52Q8NDY8 209 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 FAM90A27PA6NNH2 459 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 H0YGX0 51 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 Q6ZWC4 215 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 MPLKIPQ8TAP9 179 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 LIME1Q9H400 295 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 H0Y8X5 98 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 TRAV3A0A0B4J244 114 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 USF3Q68DE3 2245 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 PF4P02776 101 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 Q8N8P6 123 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 LHFPL6Q9Y693 200 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 BUB3O43684 328 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 THAP8Q8NA92 274 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 TMEM171Q8WVE6 324 aa7.23□□□□□ -1.25
LIG3-202ENST00000378526 LY75O60449 1722 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 CFC1BP0CG36 223 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 CFC1P0CG37 223 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 C10orf91Q5T1B1 145 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 WFDC5Q8TCV5 224 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 BADQ92934 168 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 PROB1E7EW31 1015 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 CRYGBP07316 175 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 ID3Q02535 119 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 TRGV9Q99603 122 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 PIN1P1O15428 100 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 IL15RAQ13261 267 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 LYPD6BQ8NI32 183 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 K7ERJ3 54 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 CCL7P80098 99 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 KLHDC9Q8NEP7 349 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 YPEL2Q96QA6 119 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 DEPPQ9NTK1 212 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 C21orf140B9A014 251 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 COX6A1P12074 109 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 PRCDQ00LT1 54 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 TMEM75Q8N9X5 138 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 LINC00643Q86TS7 51 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 RLFQ13129 1914 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 MALRD1Q5VYJ5 2156 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 IGLV1-36A0A0B4J1U3 117 aa7.22□□□□□ -1.25
LIG3-202ENST00000378526 RCHY1Q96PM5 261 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms