RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 OR5I1Q13606 314 aa9.9□□□□□ -0.82
PTCH1-202ENST00000375271 RNF141Q8WVD5 230 aa9.9□□□□□ -0.82
PTCH1-202ENST00000375271 GNPNAT1Q96EK6 184 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-202ENST00000375271 C20orf173Q96LM9 149 aa9.9□□□□□ -0.82
PTCH1-202ENST00000375271 SHPKQ9UHJ6 478 aa9.9□□□□□ -0.82
PTCH1-202ENST00000375271 SCP2D1Q9UJQ7 156 aa9.9□□□□□ -0.82
PTCH1-202ENST00000375271 SLC45A2Q9UMX9 530 aa9.9□□□□□ -0.82
PTCH1-202ENST00000375271 TIMM8BQ9Y5J9 83 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-202ENST00000375271 IGKV1D-37A0A075B6S9 117 aa9.89□□□□□ -0.83
PTCH1-202ENST00000375271 TRAV12-2A0A075B6T6 113 aa9.89□□□□□ -0.83
PTCH1-202ENST00000375271 ZNF98A6NK75 572 aa9.89□□□□□ -0.83
PTCH1-202ENST00000375271 EPM2AB3EWF7 344 aa9.89□□□□□ -0.83
PTCH1-202ENST00000375271 EREGO14944 169 aa9.89□□□□□ -0.83
PTCH1-202ENST00000375271 HIST1H1AQ02539 215 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-202ENST00000375271 AKR1C1Q04828 323 aa9.89□□□□□ -0.83
PTCH1-202ENST00000375271 FCN2Q15485 313 aa9.89□□□□□ -0.83
PTCH1-202ENST00000375271 TMEM144Q7Z5S9 345 aa9.89□□□□□ -0.83
PTCH1-202ENST00000375271 S100A7AQ86SG5 101 aa9.89□□□□□ -0.83
PTCH1-202ENST00000375271 MED6O75586 246 aa9.88□□□□□ -0.83
PTCH1-202ENST00000375271 IAPPP10997 89 aa9.88□□□□□ -0.83
PTCH1-202ENST00000375271 TAS2R60P59551 318 aa9.88□□□□□ -0.83
PTCH1-202ENST00000375271 RAP2BP61225 183 aa9.88□□□□□ -0.83
PTCH1-202ENST00000375271 DLK1P80370 383 aa9.88□□□□□ -0.83
PTCH1-202ENST00000375271 AMTNQ6UX39 209 aa9.88□□□□□ -0.83
PTCH1-202ENST00000375271 CLVS1Q8IUQ0 354 aaPredicted RBP9.88□□□□□ -0.83
PTCH1-202ENST00000375271 OR4D5Q8NGN0 318 aa9.88□□□□□ -0.83
PTCH1-202ENST00000375271 SLC25A39Q9BZJ4 359 aaPredicted RBP9.88□□□□□ -0.83
PTCH1-202ENST00000375271 MCUBQ9NWR8 336 aa9.88□□□□□ -0.83
PTCH1-202ENST00000375271 PRR13Q9NZ81 148 aa9.88□□□□□ -0.83
PTCH1-202ENST00000375271 GPR132Q9UNW8 380 aa9.88□□□□□ -0.83
PTCH1-202ENST00000375271 A8MTW9 85 aa9.87□□□□□ -0.83
PTCH1-202ENST00000375271 PRM2P04554 102 aa9.87□□□□□ -0.83
PTCH1-202ENST00000375271 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.87□□□□□ -0.83
PTCH1-202ENST00000375271 CCDC28AQ8IWP9 274 aa9.87□□□□□ -0.83
PTCH1-202ENST00000375271 RNF182Q8N6D2 247 aa9.87□□□□□ -0.83
PTCH1-202ENST00000375271 OR51S1Q8NGJ8 323 aa9.87□□□□□ -0.83
PTCH1-202ENST00000375271 CIB3Q96Q77 187 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-202ENST00000375271 LRP1BQ9NZR2 4599 aa9.86□□□□□ -0.83
PTCH1-202ENST00000375271 TRAV26-1A0A087WT03 109 aa9.86□□□□□ -0.83
PTCH1-202ENST00000375271 SMCO3A2RU48 225 aa9.86□□□□□ -0.83
PTCH1-202ENST00000375271 RPL7P18124 248 aaKnown RBP9.86□□□□□ -0.83
PTCH1-202ENST00000375271 M6PRP20645 277 aa9.86□□□□□ -0.83
PTCH1-202ENST00000375271 IL18Q14116 193 aa9.86□□□□□ -0.83
PTCH1-202ENST00000375271 ZNF493Q6ZR52 646 aa9.86□□□□□ -0.83
PTCH1-202ENST00000375271 LYZL2Q7Z4W2 148 aa9.86□□□□□ -0.83
PTCH1-202ENST00000375271 Q9H3A6 140 aa9.86□□□□□ -0.83
PTCH1-202ENST00000375271 NOP10Q9NPE3 64 aaKnown RBP9.86□□□□□ -0.83
PTCH1-202ENST00000375271 A0A1W2PPQ1 181 aa9.85□□□□□ -0.83
PTCH1-202ENST00000375271 CRXO43186 299 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-202ENST00000375271 RLN2P04090 185 aa9.85□□□□□ -0.83
PTCH1-202ENST00000375271 AZU1P20160 251 aa9.85□□□□□ -0.83
PTCH1-202ENST00000375271 IGFL4Q6B9Z1 124 aa9.85□□□□□ -0.83
PTCH1-202ENST00000375271 THAP8Q8NA92 274 aa9.85□□□□□ -0.83
PTCH1-202ENST00000375271 TMEM263Q8WUH6 116 aaKnown RBP9.85□□□□□ -0.83
PTCH1-202ENST00000375271 SMIM4Q8WVI0 70 aa9.85□□□□□ -0.83
PTCH1-202ENST00000375271 UHRF2Q96PU4 802 aa9.85□□□□□ -0.83
PTCH1-202ENST00000375271 RNF24Q9Y225 148 aa9.85□□□□□ -0.83
PTCH1-202ENST00000375271 A0A0J9YY99 117 aa9.84□□□□□ -0.83
PTCH1-202ENST00000375271 SNURFLB1AK76 121 aa9.84□□□□□ -0.83
PTCH1-202ENST00000375271 BTF3P20290 206 aaKnown RBP9.84□□□□□ -0.83
PTCH1-202ENST00000375271 CDKN1BP46527 198 aa9.84□□□□□ -0.83
PTCH1-202ENST00000375271 OR8A1Q8NGG7 326 aa9.84□□□□□ -0.83
PTCH1-202ENST00000375271 RXFP4Q8TDU9 374 aa9.84□□□□□ -0.83
PTCH1-202ENST00000375271 ZNF503Q96F45 646 aa9.84□□□□□ -0.83
PTCH1-202ENST00000375271 ZNF586Q9NXT0 402 aa9.84□□□□□ -0.83
PTCH1-202ENST00000375271 HIGD1AQ9Y241 93 aa9.84□□□□□ -0.83
PTCH1-202ENST00000375271 DUXBA0A1W2PPF3 345 aa9.83□□□□□ -0.84
PTCH1-202ENST00000375271 H7BYZ3 331 aa9.83□□□□□ -0.84
PTCH1-202ENST00000375271 IL5P05113 134 aa9.83□□□□□ -0.84
PTCH1-202ENST00000375271 OR5G3P0C626 314 aa9.83□□□□□ -0.84
PTCH1-202ENST00000375271 INAFM2P0DMQ5 153 aa9.83□□□□□ -0.84
PTCH1-202ENST00000375271 FRZBQ92765 325 aa9.83□□□□□ -0.84
PTCH1-202ENST00000375271 RABL2AQ9UBK7 228 aaPredicted RBP9.83□□□□□ -0.84
PTCH1-202ENST00000375271 RABL2BQ9UNT1 228 aa9.83□□□□□ -0.84
PTCH1-202ENST00000375271 IGKV1OR2-108A0A075B7D4 117 aa9.82□□□□□ -0.84
PTCH1-202ENST00000375271 PLAC8L1A1L4L8 177 aa9.82□□□□□ -0.84
PTCH1-202ENST00000375271 WRBO00258 174 aa9.82□□□□□ -0.84
PTCH1-202ENST00000375271 HYPMO75409 117 aa9.82□□□□□ -0.84
PTCH1-202ENST00000375271 ANXA7P20073 488 aaKnown RBP9.82□□□□□ -0.84
PTCH1-202ENST00000375271 VAMP1P23763 118 aa9.82□□□□□ -0.84
PTCH1-202ENST00000375271 GATA2P23769 480 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-202ENST00000375271 FAUP35544 74 aaKnown RBP9.82□□□□□ -0.84
PTCH1-202ENST00000375271 KRTAP10-2P60368 255 aa9.82□□□□□ -0.84
PTCH1-202ENST00000375271 ERVFC1-1P60608 527 aa9.82□□□□□ -0.84
PTCH1-202ENST00000375271 SPANXN5Q5MJ07 72 aa9.82□□□□□ -0.84
PTCH1-202ENST00000375271 TMED4Q7Z7H5 227 aa9.82□□□□□ -0.84
PTCH1-202ENST00000375271 CCDC190Q86UF4 302 aa9.82□□□□□ -0.84
PTCH1-202ENST00000375271 DIRAS2Q96HU8 199 aa9.82□□□□□ -0.84
PTCH1-202ENST00000375271 UPK3BQ9BT76 320 aa9.82□□□□□ -0.84
PTCH1-202ENST00000375271 DNAH5Q8TE73 4624 aa9.81□□□□□ -0.84
PTCH1-202ENST00000375271 TRAV8-2A0A0B4J237 113 aa9.81□□□□□ -0.84
PTCH1-202ENST00000375271 GAGE12BA1L429 117 aa9.81□□□□□ -0.84
PTCH1-202ENST00000375271 H3BRN7 92 aa9.81□□□□□ -0.84
PTCH1-202ENST00000375271 GAGE7O76087 117 aa9.81□□□□□ -0.84
PTCH1-202ENST00000375271 GAGE12FP0CL80 117 aa9.81□□□□□ -0.84
PTCH1-202ENST00000375271 GAGE12GP0CL81 117 aa9.81□□□□□ -0.84
PTCH1-202ENST00000375271 GAGE12IP0CL82 117 aa9.81□□□□□ -0.84
PTCH1-202ENST00000375271 PSG3Q16557 428 aa9.81□□□□□ -0.84
PTCH1-202ENST00000375271 C20orf144Q9BQM9 153 aa9.81□□□□□ -0.84
PTCH1-202ENST00000375271 MRPS16Q9Y3D3 137 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms