RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 IGLV1-47P01700 117 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 IGHV2-70P01814 119 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 CRYGBP07316 175 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 OR10J4P0C629 311 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 C8orf88P0DMB2 117 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 REG1BP48304 166 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 SELENOTP62341 195 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 WT1-ASQ06250 92 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 PSG5Q15238 335 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 MRGPRG-AS1Q2M3A8 158 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 PYY3Q5JQD4 70 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 MOB3BQ86TA1 216 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 MMD2Q8IY49 270 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 C11orf42Q8N5U0 333 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 NECAP1Q8NC96 275 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 ST6GALNAC3Q8NDV1 305 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 OR10W1Q8NGF6 305 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 OR10G8Q8NGN5 311 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 OR10D4PQ8NGN7 298 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 OR1L4Q8NGR5 311 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 C8orf46Q8TAG6 207 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 FAM167A-AS1Q96KT0 104 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 HIST1H2BLQ99880 126 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 GPR61Q9BZJ8 451 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 MIOXQ9UGB7 285 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 AMMECR1Q9Y4X0 333 aaPredicted RBP3.77□□□□□ -1.81
USP48-202ENST00000374730 HRNRQ86YZ3 2850 aaPredicted RBP3.77□□□□□ -1.81
USP48-202ENST00000374730 PLXNB1O43157 2135 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 LRBAP50851 2863 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 HELZ2Q9BYK8 2649 aaKnown RBP3.76□□□□□ -1.81
USP48-202ENST00000374730 IGKV1D-37A0A075B6S9 117 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 TRBV9A0A0B4J1U6 114 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 IGHV2-26A0A0B4J1V2 119 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 IGLC7A0M8Q6 106 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 XKRY2A2RUG3 117 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 GGTLC3B5MD39 225 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 E7EUB6 86 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 F8WDY8 70 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 K7EN84 100 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 CORTO00230 105 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 OR7C2O60412 319 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 NDUFS7O75251 213 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 FOXH1O75593 365 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 CRYGCP07315 174 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 CSN3P07498 182 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 HIST1H1BP16401 226 aaKnown RBP3.76□□□□□ -1.81
USP48-202ENST00000374730 RPL27AP46776 148 aaKnown RBP3.76□□□□□ -1.81
USP48-202ENST00000374730 PRRX1P54821 245 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 TAS2R60P59551 318 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 YPEL3P61236 119 aaPredicted RBP3.76□□□□□ -1.81
USP48-202ENST00000374730 KLRB1Q12918 225 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 DIAPH2-AS1Q14236 149 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 PRSS8Q16651 343 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 CENPWQ5EE01 88 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 C10orf55Q5SWW7 151 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 ZNF841Q6ZN19 808 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 MUC15Q8N387 334 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 OR5R1Q8NH85 324 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 OR2T6Q8NHC8 308 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 SGMS2Q8NHU3 365 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 TMEM37Q8WXS4 190 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 C22orf15Q8WYQ4 148 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 TMEM190Q8WZ59 177 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 IGF2BP2-AS1Q96M15 143 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 PACRGQ96M98 296 aaPredicted RBP3.76□□□□□ -1.81
USP48-202ENST00000374730 RNF5Q99942 180 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 ATG101Q9BSB4 218 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 SLC25A2Q9BXI2 301 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 CLEC7AQ9BXN2 247 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 FNDC4Q9H6D8 234 aaPredicted RBP3.76□□□□□ -1.81
USP48-202ENST00000374730 OSTCQ9NRP0 149 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 IL36BQ9NZH7 164 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 SPTA1P02549 2419 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 IGF2RP11717 2491 aa3.76□□□□□ -1.81
USP48-202ENST00000374730 TACC2O95359 2948 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 IGHV1-3A0A0C4DH29 117 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 HELTA6NFD8 242 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 LINC00587B1AMM8 73 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 LY6LH3BQJ8 138 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 BUB1B-PAK6H3BSN5 160 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 ISLRO14498 428 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 COX7A2P2O60397 106 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 GCGP01275 180 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 AMBPP02760 352 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 FABP4P15090 132 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 GATA2P23769 480 aaPredicted RBP3.75□□□□□ -1.81
USP48-202ENST00000374730 CRYBB3P26998 211 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 GNG4P50150 75 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 CNN1P51911 297 aaKnown RBP3.75□□□□□ -1.81
USP48-202ENST00000374730 HILS1P60008 231 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 PLP1P60201 277 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 UBE2L3P68036 154 aaKnown RBP3.75□□□□□ -1.81
USP48-202ENST00000374730 RPL19P84098 196 aaKnown RBP3.75□□□□□ -1.81
USP48-202ENST00000374730 JOSD1Q15040 202 aaPredicted RBP3.75□□□□□ -1.81
USP48-202ENST00000374730 CLEC12BQ2HXU8 276 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 COX19Q49B96 90 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 C10orf113Q5VZT2 155 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 LY6G5BQ8NDX9 201 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 STXBP6Q8NFX7 210 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 OR5T1Q8NG75 326 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms