RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 SPP1P10451 314 aa12.37□□□□□ -0.43
CKLF-204ENST00000362093 CAMLGP49069 296 aa12.37□□□□□ -0.43
CKLF-204ENST00000362093 PRR20EP86478 221 aa12.37□□□□□ -0.43
CKLF-204ENST00000362093 PRR20CP86479 221 aa12.37□□□□□ -0.43
CKLF-204ENST00000362093 PRR20DP86480 221 aa12.37□□□□□ -0.43
CKLF-204ENST00000362093 PRR20BP86481 221 aa12.37□□□□□ -0.43
CKLF-204ENST00000362093 PRR20AP86496 221 aa12.37□□□□□ -0.43
CKLF-204ENST00000362093 RAB31Q13636 194 aa12.37□□□□□ -0.43
CKLF-204ENST00000362093 CASC10Q5T4H9 136 aa12.37□□□□□ -0.43
CKLF-204ENST00000362093 S100A7AQ86SG5 101 aa12.37□□□□□ -0.43
CKLF-204ENST00000362093 GATAD1Q8WUU5 269 aa12.37□□□□□ -0.43
CKLF-204ENST00000362093 LINC00052Q96N35 136 aa12.37□□□□□ -0.43
CKLF-204ENST00000362093 UHRF2Q96PU4 802 aa12.37□□□□□ -0.43
CKLF-204ENST00000362093 SLC25A31Q9H0C2 315 aa12.37□□□□□ -0.43
CKLF-204ENST00000362093 ARV1Q9H2C2 271 aa12.37□□□□□ -0.43
CKLF-204ENST00000362093 ISLRO14498 428 aa12.36□□□□□ -0.43
CKLF-204ENST00000362093 MPC2O95563 127 aa12.36□□□□□ -0.43
CKLF-204ENST00000362093 MEOX2P50222 304 aa12.36□□□□□ -0.43
CKLF-204ENST00000362093 EWSR1Q01844 656 aaKnown RBP eCLIP12.36□□□□□ -0.43
CKLF-204ENST00000362093 SAMD13Q5VXD3 122 aa12.36□□□□□ -0.43
CKLF-204ENST00000362093 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.36□□□□□ -0.43
CKLF-204ENST00000362093 TMEM37Q8WXS4 190 aa12.36□□□□□ -0.43
CKLF-204ENST00000362093 UBE2L5PA0A1B0GUS4 154 aa12.35□□□□□ -0.43
CKLF-204ENST00000362093 RPL7P18124 248 aaKnown RBP12.35□□□□□ -0.43
CKLF-204ENST00000362093 RPL29P47914 159 aaKnown RBP12.35□□□□□ -0.43
CKLF-204ENST00000362093 MIC13Q5XKP0 118 aa12.35□□□□□ -0.43
CKLF-204ENST00000362093 C16orf92Q96LL3 132 aa12.35□□□□□ -0.43
CKLF-204ENST00000362093 C20orf173Q96LM9 149 aa12.35□□□□□ -0.43
CKLF-204ENST00000362093 RNF24Q9Y225 148 aa12.35□□□□□ -0.43
CKLF-204ENST00000362093 ELOA3CA0A087WX78 387 aaPredicted RBP12.34□□□□□ -0.43
CKLF-204ENST00000362093 MRPS12O15235 138 aaKnown RBP12.34□□□□□ -0.43
CKLF-204ENST00000362093 HLA-DRB4P13762 266 aa12.34□□□□□ -0.43
CKLF-204ENST00000362093 CXCL3P19876 107 aa12.34□□□□□ -0.43
CKLF-204ENST00000362093 DEFB1P60022 68 aa12.34□□□□□ -0.43
CKLF-204ENST00000362093 BAXQ07812 192 aa12.34□□□□□ -0.43
CKLF-204ENST00000362093 OPCMLQ14982 345 aa12.34□□□□□ -0.43
CKLF-204ENST00000362093 TMEM41BQ5BJD5 291 aa12.34□□□□□ -0.43
CKLF-204ENST00000362093 GDF5OSQ5U4N7 250 aa12.34□□□□□ -0.43
CKLF-204ENST00000362093 Q6ZRG5 221 aa12.34□□□□□ -0.43
CKLF-204ENST00000362093 LINC00305Q7Z4B0 112 aa12.34□□□□□ -0.43
CKLF-204ENST00000362093 OR5C1Q8NGR4 320 aa12.34□□□□□ -0.43
CKLF-204ENST00000362093 IL17DQ8TAD2 202 aa12.34□□□□□ -0.43
CKLF-204ENST00000362093 RARRES2Q99969 163 aa12.34□□□□□ -0.43
CKLF-204ENST00000362093 SAV1Q9H4B6 383 aaPredicted RBP12.34□□□□□ -0.43
CKLF-204ENST00000362093 DNAJC4Q9NNZ3 241 aa12.34□□□□□ -0.43
CKLF-204ENST00000362093 HLA-DRB4X5D2U9 266 aa12.34□□□□□ -0.43
CKLF-204ENST00000362093 DNAH7Q8WXX0 4024 aa12.34□□□□□ -0.43
CKLF-204ENST00000362093 BIRC6Q9NR09 4857 aa12.33□□□□□ -0.44
CKLF-204ENST00000362093 A0A087X0K7 114 aa12.33□□□□□ -0.44
CKLF-204ENST00000362093 TRAV8-2A0A0B4J237 113 aa12.33□□□□□ -0.44
CKLF-204ENST00000362093 A0A0J9YWU9 116 aa12.33□□□□□ -0.44
CKLF-204ENST00000362093 COX7A2P2O60397 106 aa12.33□□□□□ -0.44
CKLF-204ENST00000362093 MPDU1O75352 247 aa12.33□□□□□ -0.44
CKLF-204ENST00000362093 C4BPBP20851 252 aa12.33□□□□□ -0.44
CKLF-204ENST00000362093 FGF7P21781 194 aa12.33□□□□□ -0.44
CKLF-204ENST00000362093 MORN5Q5VZ52 161 aa12.33□□□□□ -0.44
CKLF-204ENST00000362093 ZFAND6Q6FIF0 208 aa12.33□□□□□ -0.44
CKLF-204ENST00000362093 FOXI2Q6ZQN5 318 aa12.33□□□□□ -0.44
CKLF-204ENST00000362093 CSNK1G2-AS1Q8NCQ2 148 aa12.33□□□□□ -0.44
CKLF-204ENST00000362093 OR11H2Q8NH07 326 aa12.33□□□□□ -0.44
CKLF-204ENST00000362093 CLUHP3Q96NS8 147 aa12.33□□□□□ -0.44
CKLF-204ENST00000362093 SLC39A9Q9NUM3 307 aa12.33□□□□□ -0.44
CKLF-204ENST00000362093 PET100P0DJ07 73 aa12.32□□□□□ -0.44
CKLF-204ENST00000362093 ATF4P18848 351 aaPredicted RBP12.32□□□□□ -0.44
CKLF-204ENST00000362093 B2MP61769 119 aa12.32□□□□□ -0.44
CKLF-204ENST00000362093 C10orf113Q5VZT2 155 aa12.32□□□□□ -0.44
CKLF-204ENST00000362093 IGFL4Q6B9Z1 124 aa12.32□□□□□ -0.44
CKLF-204ENST00000362093 OR11H7Q8NGC8 314 aa12.32□□□□□ -0.44
CKLF-204ENST00000362093 RPRMQ9NS64 109 aa12.32□□□□□ -0.44
CKLF-204ENST00000362093 NUTF2P61970 127 aaKnown RBP12.31□□□□□ -0.44
CKLF-204ENST00000362093 FGL1Q08830 312 aa12.31□□□□□ -0.44
CKLF-204ENST00000362093 SPATA31B1PQ5VZV4 182 aa12.31□□□□□ -0.44
CKLF-204ENST00000362093 OR1L4Q8NGR5 311 aa12.31□□□□□ -0.44
CKLF-204ENST00000362093 NPCDR1Q9BY65 106 aa12.31□□□□□ -0.44
CKLF-204ENST00000362093 PXMP4Q9Y6I8 212 aa12.31□□□□□ -0.44
CKLF-204ENST00000362093 A0A0J9YX75 114 aa12.3□□□□□ -0.44
CKLF-204ENST00000362093 F6UB75 175 aa12.3□□□□□ -0.44
CKLF-204ENST00000362093 CLINT1Q14677 625 aa12.3□□□□□ -0.44
CKLF-204ENST00000362093 FCN2Q15485 313 aa12.3□□□□□ -0.44
CKLF-204ENST00000362093 EBLN2Q6P2I7 272 aa12.3□□□□□ -0.44
CKLF-204ENST00000362093 THAP6Q8TBB0 222 aa12.3□□□□□ -0.44
CKLF-204ENST00000362093 PFDN5Q99471 154 aa12.3□□□□□ -0.44
CKLF-204ENST00000362093 MED28Q9H204 178 aa12.3□□□□□ -0.44
CKLF-204ENST00000362093 MBD2Q9UBB5 411 aa12.3□□□□□ -0.44
CKLF-204ENST00000362093 HSPB11Q9Y547 144 aa12.3□□□□□ -0.44
CKLF-204ENST00000362093 TRAV5A0A0B4J249 113 aa12.29□□□□□ -0.44
CKLF-204ENST00000362093 ZNF705EA8MWA4 302 aaPredicted RBP12.29□□□□□ -0.44
CKLF-204ENST00000362093 RPL12P30050 165 aaKnown RBP12.29□□□□□ -0.44
CKLF-204ENST00000362093 RGS21Q2M5E4 152 aa12.29□□□□□ -0.44
CKLF-204ENST00000362093 BPIFA4PQ86YQ2 179 aa12.29□□□□□ -0.44
CKLF-204ENST00000362093 WDR61Q9GZS3 305 aaKnown RBP12.29□□□□□ -0.44
CKLF-204ENST00000362093 CLEC5AQ9NY25 188 aa12.29□□□□□ -0.44
CKLF-204ENST00000362093 A8MTW9 85 aa12.28□□□□□ -0.44
CKLF-204ENST00000362093 IGKV3-20P01619 116 aa12.28□□□□□ -0.44
CKLF-204ENST00000362093 FAM78BQ5VT40 261 aa12.28□□□□□ -0.44
CKLF-204ENST00000362093 RNF182Q8N6D2 247 aa12.28□□□□□ -0.44
CKLF-204ENST00000362093 OR4B1Q8NGF8 309 aa12.28□□□□□ -0.44
CKLF-204ENST00000362093 C1QTNF4Q9BXJ3 329 aa12.28□□□□□ -0.44
CKLF-204ENST00000362093 XCL2Q9UBD3 114 aa12.28□□□□□ -0.44
CKLF-204ENST00000362093 EPPK1P58107 5090 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms