RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 MSRB2Q9Y3D2 182 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 SHANK3Q9BYB0 1731 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 TRBV25-1A0A075B6N4 114 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 EFNA4P52798 201 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 C14orf178Q8N769 122 aaPredicted RBP4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 ARAP2Q8WZ64 1704 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 HIST1H2BKO60814 126 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 HIST1H2BJP06899 126 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 IGFBP3P17936 291 aaPredicted RBP4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 HIST1H2BOP23527 126 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 HIST1H2BBP33778 126 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 HIST1H2BDP58876 126 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 HIST1H2BCP62807 126 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 HIST2H2BEQ16778 126 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 C5orf64Q2M2E5 130 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 Q8TAT8 98 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 HIST1H2BHQ93079 126 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 HIST1H2BNQ99877 126 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 HIST1H2BMQ99879 126 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 PATJQ8NI35 1801 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 KIR3DS1Q14943 382 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 TMEM158Q8WZ71 300 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 UBL5Q9BZL1 73 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 C9orf139Q6ZV77 190 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 SPG11Q96JI7 2443 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 E9PQ18 207 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 A0A1B0GWJ7 208 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 EIF4EBP2Q13542 120 aaPredicted RBP4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 PSG3Q16557 428 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 TNRC6CQ9HCJ0 1690 aaKnown RBP4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 A6NNC1 897 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 SMKR1H3BMG3 65 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 IGHV1-8P0DP01 117 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 SELLP14151 372 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 TMEM178BH3BS89 294 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 SPINK8P0C7L1 97 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 CLPSP04118 112 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 SUPT4H1P63272 117 aaKnown RBP4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 LYZL4Q96KX0 146 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 hDV102S1A0JD36 115 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 FAM223BA6NKX1 122 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 FAM223AQ8IWN6 122 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 C22orf46C9J442 243 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 LAMB2P55268 1798 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 PMVKQ15126 192 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 RNF222A6NCQ9 220 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 NUP35Q8NFH5 326 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 RNF126Q9BV68 326 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 PLXNA1Q9UIW2 1896 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 HEPN1Q6WQI6 88 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 TRPT1Q86TN4 253 aaKnown RBP4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 RMI2Q96E14 147 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 OOSP1A8MZH6 123 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 IL18BPO95998 194 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 PSPNO60542 156 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 KLF5Q13887 457 aaPredicted RBP4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 CT83Q5H943 113 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 C9orf153Q5TBE3 101 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 SYNJ2BPP57105 145 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 ARFGEF1Q9Y6D6 1849 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 ATRAIDQ6UW56 229 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 ZMAT4Q9H898 229 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 DOPEY1Q5JWR5 2465 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 SCRT2Q9NQ03 307 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 TAL2Q16559 108 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 GBF1Q92538 1859 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 LIME1Q9H400 295 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 HIST1H2BLQ99880 126 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 CLPSL1A2RUU4 121 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 M0R1W7 72 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 DEFB131AP59861 70 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 RPUSD1Q9UJJ7 312 aaKnown RBP4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 GATA4P43694 442 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 RHPN1-AS1Q9BWJ2 59 aa4.74□□□□□ -1.65
SRGAP1-201ENST00000355086 APOC4P55056 127 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 AGMATQ9BSE5 352 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 IGHV3-16A0A0C4DH30 117 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 CITED1Q99966 193 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 WFDC1Q9HC57 220 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 A0A1B0GTI1 187 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 H0YJW9 148 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 BUB1B-PAK6H3BSN5 160 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 XCL2Q9UBD3 114 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 SCN4AP35499 1836 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 SRSF3P84103 164 aaKnown RBP4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 BMPERQ8N8U9 685 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 FOXF2Q12947 444 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 RGPD3A6NKT7 1758 aaPredicted RBP4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 ZNF236Q9UL36 1845 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 ZC2HC1BQ5TFG8 222 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 RNF5Q99942 180 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 RSPO3Q9BXY4 272 aaPredicted RBP4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 GNLYP22749 145 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 SMIM2Q9BVW6 85 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 DLEC1Q9Y238 1755 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 ADAMTSL5Q6ZMM2 481 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 MRPL52Q86TS9 123 aaKnown RBP4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 SPATA31B1PQ5VZV4 182 aa4.73□□□□□ -1.65
SRGAP1-201ENST00000355086 SIGLEC9Q9Y336 463 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms