RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 ZADH2Q8N4Q0 377 aa7.57□□□□□ -1.2
SMG6-202ENST00000354901 C1orf159Q96HA4 380 aa7.57□□□□□ -1.2
SMG6-202ENST00000354901 CEP295Q9C0D2 2601 aa7.57□□□□□ -1.2
SMG6-202ENST00000354901 TEX50A0A1B0GTY4 177 aa7.57□□□□□ -1.2
SMG6-202ENST00000354901 A0A1B0GWB2 263 aa7.57□□□□□ -1.2
SMG6-202ENST00000354901 C15orf61A6NNL5 157 aa7.57□□□□□ -1.2
SMG6-202ENST00000354901 K7EM74 188 aa7.57□□□□□ -1.2
SMG6-202ENST00000354901 TAS2R45P59539 299 aa7.57□□□□□ -1.2
SMG6-202ENST00000354901 HSPE1P61604 102 aaKnown RBP7.57□□□□□ -1.2
SMG6-202ENST00000354901 UBE2L3P68036 154 aaKnown RBP7.57□□□□□ -1.2
SMG6-202ENST00000354901 FAM120AOSQ5T036 256 aa7.57□□□□□ -1.2
SMG6-202ENST00000354901 SPAG8Q99932 426 aaPredicted RBP7.57□□□□□ -1.2
SMG6-202ENST00000354901 A8MWL6 223 aa7.57□□□□□ -1.2
SMG6-202ENST00000354901 FAM87AP0C7U9 286 aa7.57□□□□□ -1.2
SMG6-202ENST00000354901 PRSS3P2Q8NHM4 247 aa7.57□□□□□ -1.2
SMG6-202ENST00000354901 IDI2-AS1Q9NZ38 188 aa7.57□□□□□ -1.2
SMG6-202ENST00000354901 SMIM27A0A1W2PRY6 76 aa7.56□□□□□ -1.2
SMG6-202ENST00000354901 PRSS46E5RG02 174 aa7.56□□□□□ -1.2
SMG6-202ENST00000354901 MPDU1O75352 247 aa7.56□□□□□ -1.2
SMG6-202ENST00000354901 SMIM13P0DJ93 91 aa7.56□□□□□ -1.2
SMG6-202ENST00000354901 CACNG7P62955 275 aa7.56□□□□□ -1.2
SMG6-202ENST00000354901 RNF7Q9UBF6 113 aa7.56□□□□□ -1.2
SMG6-202ENST00000354901 DSCAML1Q8TD84 2053 aa7.56□□□□□ -1.2
SMG6-202ENST00000354901 KALRNO60229 2985 aa7.56□□□□□ -1.2
SMG6-202ENST00000354901 TACC2O95359 2948 aa7.56□□□□□ -1.2
SMG6-202ENST00000354901 SRRM4A7MD48 611 aaKnown RBP7.56□□□□□ -1.2
SMG6-202ENST00000354901 APOHP02749 345 aaPredicted RBP7.56□□□□□ -1.2
SMG6-202ENST00000354901 GLRXP35754 106 aa7.56□□□□□ -1.2
SMG6-202ENST00000354901 H1FXQ92522 213 aaKnown RBP7.56□□□□□ -1.2
SMG6-202ENST00000354901 ASCL2Q99929 193 aa7.56□□□□□ -1.2
SMG6-202ENST00000354901 TXNDC17Q9BRA2 123 aa7.56□□□□□ -1.2
SMG6-202ENST00000354901 FAM215AQ9Y5M1 114 aa7.56□□□□□ -1.2
SMG6-202ENST00000354901 TLN1Q9Y490 2541 aaKnown RBP7.56□□□□□ -1.2
SMG6-202ENST00000354901 PYYP10082 97 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 CCL3L1P16619 93 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 PRB3Q04118 309 aaPredicted RBP7.55□□□□□ -1.2
SMG6-202ENST00000354901 BCL6BQ8N143 479 aaPredicted RBP7.55□□□□□ -1.2
SMG6-202ENST00000354901 OR9G1Q8NH87 305 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 DDB2Q92466 427 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 RAB1CQ92928 201 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 IGHV1-46P01743 117 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 SMIM17P0DL12 118 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 FXYD2P54710 66 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 TMPRSS3P57727 454 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 IGFL3Q6UXB1 125 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 SYT8Q8NBV8 401 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 HARBI1Q96MB7 349 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 TMSB15BA0A087X1C1 80 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 TGFAP01135 160 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 APELAP0DMC3 54 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 CFHR2P36980 270 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 HBBP68871 147 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 SPTAN1Q13813 2472 aaKnown RBP7.55□□□□□ -1.2
SMG6-202ENST00000354901 C5orf64Q2M2E5 130 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 C18orf15Q96N68 181 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 NABP2Q9BQ15 211 aa7.55□□□□□ -1.2
SMG6-202ENST00000354901 MRPL16Q9NX20 251 aaKnown RBP7.55□□□□□ -1.2
SMG6-202ENST00000354901 IGKV1OR2-108A0A075B7D4 117 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 MT-ATP8P03928 68 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 PSG8Q9UQ74 426 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 MALRD1Q5VYJ5 2156 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 ZNF292O60281 2723 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 MBD3L4A6NDZ8 208 aaPredicted RBP7.54□□□□□ -1.2
SMG6-202ENST00000354901 MBD3L3A6NE82 208 aaPredicted RBP7.54□□□□□ -1.2
SMG6-202ENST00000354901 MBD3L5A6NJ08 208 aaPredicted RBP7.54□□□□□ -1.2
SMG6-202ENST00000354901 ATP5J2P56134 94 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 C10orf55Q5SWW7 151 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 MBD3L2Q8NHZ7 208 aaPredicted RBP7.54□□□□□ -1.2
SMG6-202ENST00000354901 GLMPQ8WWB7 406 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 GAFA1Q96PS6 74 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 MS4A6AQ9H2W1 248 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 TMEM14BQ9NUH8 114 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 AMMECR1Q9Y4X0 333 aaPredicted RBP7.54□□□□□ -1.2
SMG6-202ENST00000354901 VWC2LB2RUY7 222 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 LHBP01229 141 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 CT45A6P0DMU7 189 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 CT45A5P0DMU8 189 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 CT45A7P0DMV0 189 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 CGB3P0DN86 165 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 CGB7P0DN87 165 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 KIR2DS2P43631 304 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 GAGE5Q13069 117 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 GAGE6Q13070 117 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 DAZAP1Q96EP5 407 aaKnown RBP7.54□□□□□ -1.2
SMG6-202ENST00000354901 AP5S1Q9NUS5 200 aa7.54□□□□□ -1.2
SMG6-202ENST00000354901 CUL9Q8IWT3 2517 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 RAI1Q7Z5J4 1906 aaPredicted RBP7.53□□□□□ -1.2
SMG6-202ENST00000354901 CACNA1BQ00975 2339 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 IGLV2-8P01709 118 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 SAA1P0DJI8 122 aaPredicted RBP7.53□□□□□ -1.2
SMG6-202ENST00000354901 CCL17Q92583 94 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 C11orf52Q96A22 123 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 MRPL20Q9BYC9 149 aaKnown RBP7.53□□□□□ -1.2
SMG6-202ENST00000354901 YAE1D1Q9NRH1 226 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 TMEM167BQ9NRX6 74 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 DLX1P56177 255 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 DIAPH2-AS1Q14236 149 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 C3orf56Q8N813 242 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 VGLL1Q99990 258 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 SPANXB1Q9NS25 103 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms