RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 ZNF546Q86UE3 836 aa14.49□□□□□ -0.09
CEACAM3-201ENST00000344550 C2orf50Q96LR7 162 aa14.49□□□□□ -0.09
CEACAM3-201ENST00000344550 CLEC5AQ9NY25 188 aa14.49□□□□□ -0.09
CEACAM3-201ENST00000344550 A0A0J9YX75 114 aa14.48□□□□□ -0.09
CEACAM3-201ENST00000344550 ZNF705FA8MVS1 300 aaPredicted RBP14.48□□□□□ -0.09
CEACAM3-201ENST00000344550 DEFB4AO15263 64 aa14.48□□□□□ -0.09
CEACAM3-201ENST00000344550 LY6G6CO95867 125 aa14.48□□□□□ -0.09
CEACAM3-201ENST00000344550 ZNF705DP0CH99 300 aaPredicted RBP14.48□□□□□ -0.09
CEACAM3-201ENST00000344550 ZNF705BP0CI00 300 aaPredicted RBP14.48□□□□□ -0.09
CEACAM3-201ENST00000344550 PVALBP20472 110 aaPredicted RBP14.48□□□□□ -0.09
CEACAM3-201ENST00000344550 PSG9Q00887 426 aa14.48□□□□□ -0.09
CEACAM3-201ENST00000344550 PLECQ15149 4684 aaKnown RBP14.48□□□□□ -0.09
CEACAM3-201ENST00000344550 AMBPP02760 352 aa14.47□□□□□ -0.09
CEACAM3-201ENST00000344550 RAB31Q13636 194 aa14.47□□□□□ -0.09
CEACAM3-201ENST00000344550 GDF5OSQ5U4N7 250 aa14.47□□□□□ -0.09
CEACAM3-201ENST00000344550 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.47□□□□□ -0.09
CEACAM3-201ENST00000344550 DOK5Q9P104 306 aa14.47□□□□□ -0.09
CEACAM3-201ENST00000344550 ALMS1Q8TCU4 4167 aa14.46□□□□□ -0.09
CEACAM3-201ENST00000344550 ELOA3CA0A087WX78 387 aaPredicted RBP14.46□□□□□ -0.09
CEACAM3-201ENST00000344550 A0A087X0K7 114 aa14.46□□□□□ -0.09
CEACAM3-201ENST00000344550 C5orf51A6NDU8 294 aa14.46□□□□□ -0.09
CEACAM3-201ENST00000344550 GOSR2O14653 212 aa14.46□□□□□ -0.09
CEACAM3-201ENST00000344550 DUSP14O95147 198 aaKnown RBP14.46□□□□□ -0.09
CEACAM3-201ENST00000344550 RRAS2P62070 204 aaPredicted RBP14.46□□□□□ -0.09
CEACAM3-201ENST00000344550 ZNF709Q8N972 641 aa14.46□□□□□ -0.09
CEACAM3-201ENST00000344550 OR4B1Q8NGF8 309 aa14.46□□□□□ -0.09
CEACAM3-201ENST00000344550 C17orf77Q96MU5 243 aa14.46□□□□□ -0.09
CEACAM3-201ENST00000344550 SCRT1Q9BWW7 348 aa14.46□□□□□ -0.09
CEACAM3-201ENST00000344550 TRAV10A0A0B4J240 114 aa14.45□□□□□ -0.1
CEACAM3-201ENST00000344550 TEX48A0A1B0GUV7 120 aa14.45□□□□□ -0.1
CEACAM3-201ENST00000344550 A6NHS1 94 aa14.45□□□□□ -0.1
CEACAM3-201ENST00000344550 CCNKO75909 580 aa14.45□□□□□ -0.1
CEACAM3-201ENST00000344550 OR5G3P0C626 314 aa14.45□□□□□ -0.1
CEACAM3-201ENST00000344550 HLA-DMBP28068 263 aa14.45□□□□□ -0.1
CEACAM3-201ENST00000344550 FAM78BQ5VT40 261 aa14.45□□□□□ -0.1
CEACAM3-201ENST00000344550 GSG1LQ6UXU4 331 aa14.45□□□□□ -0.1
CEACAM3-201ENST00000344550 SEC22CQ9BRL7 303 aa14.45□□□□□ -0.1
CEACAM3-201ENST00000344550 FAM25EA8MYX2 175 aa14.44□□□□□ -0.1
CEACAM3-201ENST00000344550 CCSO14618 274 aa14.44□□□□□ -0.1
CEACAM3-201ENST00000344550 AGPAT2O15120 278 aa14.44□□□□□ -0.1
CEACAM3-201ENST00000344550 CXCL2P19875 107 aa14.44□□□□□ -0.1
CEACAM3-201ENST00000344550 IL15RAQ13261 267 aa14.44□□□□□ -0.1
CEACAM3-201ENST00000344550 ARL6Q9H0F7 186 aa14.44□□□□□ -0.1
CEACAM3-201ENST00000344550 ARV1Q9H2C2 271 aa14.44□□□□□ -0.1
CEACAM3-201ENST00000344550 C11orf1Q9H5F2 150 aa14.44□□□□□ -0.1
CEACAM3-201ENST00000344550 GPN1Q9HCN4 374 aaPredicted RBP14.44□□□□□ -0.1
CEACAM3-201ENST00000344550 GOLT1BQ9Y3E0 138 aa14.44□□□□□ -0.1
CEACAM3-201ENST00000344550 RFNGQ9Y644 331 aa14.44□□□□□ -0.1
CEACAM3-201ENST00000344550 UPK1BO75841 260 aa14.43□□□□□ -0.1
CEACAM3-201ENST00000344550 ARL16Q0P5N6 197 aa14.43□□□□□ -0.1
CEACAM3-201ENST00000344550 PTTG2Q9NZH5 202 aa14.43□□□□□ -0.1
CEACAM3-201ENST00000344550 LSM5Q9Y4Y9 91 aaKnown RBP14.43□□□□□ -0.1
CEACAM3-201ENST00000344550 IGKV3-20P01619 116 aa14.42□□□□□ -0.1
CEACAM3-201ENST00000344550 S100A11P31949 105 aa14.42□□□□□ -0.1
CEACAM3-201ENST00000344550 BCAP31P51572 246 aa14.42□□□□□ -0.1
CEACAM3-201ENST00000344550 CAV2P51636 162 aa14.42□□□□□ -0.1
CEACAM3-201ENST00000344550 B2MP61769 119 aa14.42□□□□□ -0.1
CEACAM3-201ENST00000344550 HBG1P69891 147 aa14.42□□□□□ -0.1
CEACAM3-201ENST00000344550 HBG2P69892 147 aa14.42□□□□□ -0.1
CEACAM3-201ENST00000344550 SLC38A11Q08AI6 406 aa14.42□□□□□ -0.1
CEACAM3-201ENST00000344550 VWC2Q2TAL6 325 aa14.42□□□□□ -0.1
CEACAM3-201ENST00000344550 CHAC2Q8WUX2 184 aa14.42□□□□□ -0.1
CEACAM3-201ENST00000344550 C20orf173Q96LM9 149 aa14.42□□□□□ -0.1
CEACAM3-201ENST00000344550 LYRM2Q9NU23 88 aaPredicted RBP14.42□□□□□ -0.1
CEACAM3-201ENST00000344550 TRAV8-2A0A0B4J237 113 aa14.41□□□□□ -0.1
CEACAM3-201ENST00000344550 SPART-AS1P0CW21 52 aa14.41□□□□□ -0.1
CEACAM3-201ENST00000344550 SULT1A1P50225 295 aa14.41□□□□□ -0.1
CEACAM3-201ENST00000344550 DEFB1P60022 68 aa14.41□□□□□ -0.1
CEACAM3-201ENST00000344550 AMTNQ6UX39 209 aa14.41□□□□□ -0.1
CEACAM3-201ENST00000344550 PATE2Q6UY27 113 aa14.41□□□□□ -0.1
CEACAM3-201ENST00000344550 Q6ZRG5 221 aa14.41□□□□□ -0.1
CEACAM3-201ENST00000344550 STX12Q86Y82 276 aa14.41□□□□□ -0.1
CEACAM3-201ENST00000344550 ENKURQ8TC29 256 aa14.41□□□□□ -0.1
CEACAM3-201ENST00000344550 IGF2BP2-AS1Q96M15 143 aa14.41□□□□□ -0.1
CEACAM3-201ENST00000344550 UHRF2Q96PU4 802 aa14.41□□□□□ -0.1
CEACAM3-201ENST00000344550 RNF126Q9BV68 326 aa14.41□□□□□ -0.1
CEACAM3-201ENST00000344550 UQCC1Q9NVA1 299 aa14.41□□□□□ -0.1
CEACAM3-201ENST00000344550 F6UB75 175 aa14.4□□□□□ -0.1
CEACAM3-201ENST00000344550 PRAF2O60831 178 aa14.4□□□□□ -0.1
CEACAM3-201ENST00000344550 CAMLGP49069 296 aa14.4□□□□□ -0.1
CEACAM3-201ENST00000344550 ATP6V1FQ16864 119 aa14.4□□□□□ -0.1
CEACAM3-201ENST00000344550 LCN15Q6UWW0 184 aa14.4□□□□□ -0.1
CEACAM3-201ENST00000344550 Q6ZTC4 211 aa14.4□□□□□ -0.1
CEACAM3-201ENST00000344550 LINC00305Q7Z4B0 112 aa14.4□□□□□ -0.1
CEACAM3-201ENST00000344550 BPIFA4PQ86YQ2 179 aa14.4□□□□□ -0.1
CEACAM3-201ENST00000344550 MGST2Q99735 147 aa14.4□□□□□ -0.1
CEACAM3-201ENST00000344550 SLC35B3Q9H1N7 401 aa14.4□□□□□ -0.1
CEACAM3-201ENST00000344550 WDR83OSQ9Y284 106 aa14.4□□□□□ -0.1
CEACAM3-201ENST00000344550 IGLL5B9A064 214 aa14.39□□□□□ -0.11
CEACAM3-201ENST00000344550 MRPS12O15235 138 aaKnown RBP14.39□□□□□ -0.11
CEACAM3-201ENST00000344550 COX7A2P2O60397 106 aa14.39□□□□□ -0.11
CEACAM3-201ENST00000344550 CXCL3P19876 107 aa14.39□□□□□ -0.11
CEACAM3-201ENST00000344550 CNN1P51911 297 aaKnown RBP14.39□□□□□ -0.11
CEACAM3-201ENST00000344550 FGL1Q08830 312 aa14.39□□□□□ -0.11
CEACAM3-201ENST00000344550 C12orf74Q32Q52 190 aa14.39□□□□□ -0.11
CEACAM3-201ENST00000344550 LRRC20Q8TCA0 184 aa14.39□□□□□ -0.11
CEACAM3-201ENST00000344550 SLC50A1Q9BRV3 221 aa14.39□□□□□ -0.11
CEACAM3-201ENST00000344550 DNAJC4Q9NNZ3 241 aa14.39□□□□□ -0.11
CEACAM3-201ENST00000344550 MPDU1O75352 247 aa14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 CST7O76096 145 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms