RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ARL6Q9H0F7 186 aa11.24□□□□□ -0.61
VAPA-201ENST00000340541 E5RGE8 158 aa11.23□□□□□ -0.61
VAPA-201ENST00000340541 H3BMM0 161 aa11.23□□□□□ -0.61
VAPA-201ENST00000340541 ISLRO14498 428 aa11.23□□□□□ -0.61
VAPA-201ENST00000340541 GALR1P47211 349 aa11.23□□□□□ -0.61
VAPA-201ENST00000340541 RAP2BP61225 183 aa11.23□□□□□ -0.61
VAPA-201ENST00000340541 EWSR1Q01844 656 aaKnown RBP eCLIP11.23□□□□□ -0.61
VAPA-201ENST00000340541 NHLH2Q02577 135 aa11.23□□□□□ -0.61
VAPA-201ENST00000340541 PXDC1Q5TGL8 231 aa11.23□□□□□ -0.61
VAPA-201ENST00000340541 GDF5OSQ5U4N7 250 aa11.23□□□□□ -0.61
VAPA-201ENST00000340541 STX12Q86Y82 276 aa11.23□□□□□ -0.61
VAPA-201ENST00000340541 GATAD1Q8WUU5 269 aa11.23□□□□□ -0.61
VAPA-201ENST00000340541 PPP1R1CQ8WVI7 109 aa11.23□□□□□ -0.61
VAPA-201ENST00000340541 GPR82Q96P67 336 aa11.23□□□□□ -0.61
VAPA-201ENST00000340541 RSG1Q9BU20 258 aa11.23□□□□□ -0.61
VAPA-201ENST00000340541 RNF126Q9BV68 326 aa11.23□□□□□ -0.61
VAPA-201ENST00000340541 ARV1Q9H2C2 271 aa11.23□□□□□ -0.61
VAPA-201ENST00000340541 A0A0J9YWU9 116 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 UBE2L5PA0A1B0GUS4 154 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 MRPS12O15235 138 aaKnown RBP11.22□□□□□ -0.61
VAPA-201ENST00000340541 SPP1P10451 314 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 HLA-DRB4P13762 266 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 S100A7P31151 101 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 CAMLGP49069 296 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 MEOX2P50222 304 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 HBG1P69891 147 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 HBG2P69892 147 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 PRR20EP86478 221 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 PRR20CP86479 221 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 PRR20DP86480 221 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 PRR20BP86481 221 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 PRR20AP86496 221 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 MORN3Q6PF18 240 aaPredicted RBP11.22□□□□□ -0.61
VAPA-201ENST00000340541 TMEM37Q8WXS4 190 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 C20orf173Q96LM9 149 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 ALG5Q9Y673 324 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 HLA-DRB4X5D2U9 266 aa11.22□□□□□ -0.61
VAPA-201ENST00000340541 RLN2P04090 185 aa11.21□□□□□ -0.61
VAPA-201ENST00000340541 ATF4P18848 351 aaPredicted RBP11.21□□□□□ -0.61
VAPA-201ENST00000340541 ID1P41134 155 aa11.21□□□□□ -0.61
VAPA-201ENST00000340541 ATP6V1FQ16864 119 aa11.21□□□□□ -0.61
VAPA-201ENST00000340541 SAMD13Q5VXD3 122 aa11.21□□□□□ -0.61
VAPA-201ENST00000340541 MIC13Q5XKP0 118 aa11.21□□□□□ -0.61
VAPA-201ENST00000340541 CSNK1G2-AS1Q8NCQ2 148 aa11.21□□□□□ -0.61
VAPA-201ENST00000340541 CHAC2Q8WUX2 184 aa11.21□□□□□ -0.61
VAPA-201ENST00000340541 LINC00052Q96N35 136 aa11.21□□□□□ -0.61
VAPA-201ENST00000340541 SAV1Q9H4B6 383 aaPredicted RBP11.21□□□□□ -0.61
VAPA-201ENST00000340541 EPPK1P58107 5090 aaKnown RBP11.21□□□□□ -0.61
VAPA-201ENST00000340541 TRAV8-2A0A0B4J237 113 aa11.2□□□□□ -0.62
VAPA-201ENST00000340541 MPC2O95563 127 aa11.2□□□□□ -0.62
VAPA-201ENST00000340541 RPL7P18124 248 aaKnown RBP11.2□□□□□ -0.62
VAPA-201ENST00000340541 CXCL3P19876 107 aa11.2□□□□□ -0.62
VAPA-201ENST00000340541 RAB31Q13636 194 aa11.2□□□□□ -0.62
VAPA-201ENST00000340541 OPCMLQ14982 345 aa11.2□□□□□ -0.62
VAPA-201ENST00000340541 MORN5Q5VZ52 161 aa11.2□□□□□ -0.62
VAPA-201ENST00000340541 FOXI2Q6ZQN5 318 aa11.2□□□□□ -0.62
VAPA-201ENST00000340541 LINC00305Q7Z4B0 112 aa11.2□□□□□ -0.62
VAPA-201ENST00000340541 OR5C1Q8NGR4 320 aa11.2□□□□□ -0.62
VAPA-201ENST00000340541 OR11H2Q8NH07 326 aa11.2□□□□□ -0.62
VAPA-201ENST00000340541 C16orf92Q96LL3 132 aa11.2□□□□□ -0.62
VAPA-201ENST00000340541 RARRES2Q99969 163 aa11.2□□□□□ -0.62
VAPA-201ENST00000340541 SLC25A31Q9H0C2 315 aa11.2□□□□□ -0.62
VAPA-201ENST00000340541 A0A087X0K7 114 aa11.19□□□□□ -0.62
VAPA-201ENST00000340541 F6UB75 175 aa11.19□□□□□ -0.62
VAPA-201ENST00000340541 FGF7P21781 194 aa11.19□□□□□ -0.62
VAPA-201ENST00000340541 RPL29P47914 159 aaKnown RBP11.19□□□□□ -0.62
VAPA-201ENST00000340541 BAXQ07812 192 aa11.19□□□□□ -0.62
VAPA-201ENST00000340541 TMEM41BQ5BJD5 291 aa11.19□□□□□ -0.62
VAPA-201ENST00000340541 ELOA3CA0A087WX78 387 aaPredicted RBP11.18□□□□□ -0.62
VAPA-201ENST00000340541 COX7A2P2O60397 106 aa11.18□□□□□ -0.62
VAPA-201ENST00000340541 C10orf113Q5VZT2 155 aa11.18□□□□□ -0.62
VAPA-201ENST00000340541 IGFL4Q6B9Z1 124 aa11.18□□□□□ -0.62
VAPA-201ENST00000340541 S100A7AQ86SG5 101 aa11.18□□□□□ -0.62
VAPA-201ENST00000340541 CLUHP3Q96NS8 147 aa11.18□□□□□ -0.62
VAPA-201ENST00000340541 DNAJC4Q9NNZ3 241 aa11.18□□□□□ -0.62
VAPA-201ENST00000340541 SLC39A9Q9NUM3 307 aa11.18□□□□□ -0.62
VAPA-201ENST00000340541 CLEC5AQ9NY25 188 aa11.18□□□□□ -0.62
VAPA-201ENST00000340541 BIRC6Q9NR09 4857 aa11.17□□□□□ -0.62
VAPA-201ENST00000340541 A0A0J9YX75 114 aa11.17□□□□□ -0.62
VAPA-201ENST00000340541 NUPR2A6NF83 97 aa11.17□□□□□ -0.62
VAPA-201ENST00000340541 MPDU1O75352 247 aa11.17□□□□□ -0.62
VAPA-201ENST00000340541 B2MP61769 119 aa11.17□□□□□ -0.62
VAPA-201ENST00000340541 DMRTA1Q5VZB9 504 aa11.17□□□□□ -0.62
VAPA-201ENST00000340541 Q6ZRG5 221 aa11.17□□□□□ -0.62
VAPA-201ENST00000340541 RNF182Q8N6D2 247 aa11.17□□□□□ -0.62
VAPA-201ENST00000340541 OR11H7Q8NGC8 314 aa11.17□□□□□ -0.62
VAPA-201ENST00000340541 THAP6Q8TBB0 222 aa11.17□□□□□ -0.62
VAPA-201ENST00000340541 LINC00476Q8WZB0 136 aa11.17□□□□□ -0.62
VAPA-201ENST00000340541 NPCDR1Q9BY65 106 aa11.17□□□□□ -0.62
VAPA-201ENST00000340541 RPRMQ9NS64 109 aa11.17□□□□□ -0.62
VAPA-201ENST00000340541 MBD2Q9UBB5 411 aa11.17□□□□□ -0.62
VAPA-201ENST00000340541 PXMP4Q9Y6I8 212 aa11.17□□□□□ -0.62
VAPA-201ENST00000340541 X6R8D5 127 aa11.17□□□□□ -0.62
VAPA-201ENST00000340541 A8MTW9 85 aa11.16□□□□□ -0.62
VAPA-201ENST00000340541 ZNF705EA8MWA4 302 aaPredicted RBP11.16□□□□□ -0.62
VAPA-201ENST00000340541 IGKV3-20P01619 116 aa11.16□□□□□ -0.62
VAPA-201ENST00000340541 PET100P0DJ07 73 aa11.16□□□□□ -0.62
VAPA-201ENST00000340541 FGL1Q08830 312 aa11.16□□□□□ -0.62
VAPA-201ENST00000340541 CLINT1Q14677 625 aa11.16□□□□□ -0.62
VAPA-201ENST00000340541 FCN2Q15485 313 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms