RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TGFBR3LH3BV60 316 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 IER5LQ5T953 404 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 ZNF493Q6ZR52 646 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 ZPLD1Q8TCW7 415 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 QSER1Q2KHR3 1735 aa5.06□□□□□ -1.6
CDC42BPA-201ENST00000334218 FAM19A5Q7Z5A7 132 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 TMEM174Q8WUU8 243 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 LIMD2Q9BT23 127 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 TMEM222Q9H0R3 208 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 POLR3KQ9Y2Y1 108 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 CACNA1GO43497 2377 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 LGALS9O00182 355 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 PPYP01298 95 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 ZFP2Q6ZN57 461 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 FAM19A2Q8N3H0 131 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 ZNF831Q5JPB2 1677 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 TMEM229AB2RXF0 380 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 PLA2G10O15496 165 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 NXPH4O95158 308 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 C1QL2Q7Z5L3 287 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 STARD5Q9NSY2 213 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 C1orf140Q5VVS0 124 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 FOCADQ5VW36 1801 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 DDX60LQ5H9U9 1706 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 TCF20Q9UGU0 1960 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 ZIC3O60481 467 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 P0DMU3 169 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 FAM231AP0DMU4 169 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 FAM231CP0DMU5 169 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 NANOS3P60323 173 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 BCL2L10Q9HD36 194 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 A0A1W2PR77 199 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 FAM90A10PA6NDY2 464 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 FAM90A20PA6NIJ5 464 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 FAM90A8PA6NJQ4 464 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 FAM90A13PP0C7W8 464 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 FAM90A24PP0C7X0 464 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 HOXB4P17483 251 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 C4orf48Q5BLP8 95 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 PPP1R32Q7Z5V6 425 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 HOGA1Q86XE5 327 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 FAM216BQ8N7L0 139 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 MRPS18CQ9Y3D5 142 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 HIVEP3Q5T1R4 2406 aa5.05□□□□□ -1.6
CDC42BPA-201ENST00000334218 HMGA1P17096 107 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 RPL18Q07020 188 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 RNASE8Q8TDE3 154 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 M0R1B8 84 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 A0A1W2PPE3 182 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 COX7A2LO14548 114 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 CRYGBP07316 175 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 RPL23P62829 140 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 NBASA2RRP1 2371 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 TRBV10-3A0A0K0K1G6 114 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 K7EN84 100 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 BEAN1Q3B7T3 259 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 TMEM52BQ4KMG9 183 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 SSC4DQ8WTU2 575 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 VPREB3Q9UKI3 123 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 FOXA3P55318 350 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 MRPL51Q4U2R6 128 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 PRSS41Q7RTY9 318 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 ABCA3Q99758 1704 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 TMEM200BQ69YZ2 307 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 WIPF2Q8TF74 440 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 ZNF32P17041 273 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 EDN2P20800 178 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 BLCAPP62952 87 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 IL17AQ16552 155 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 MPLKIPQ8TAP9 179 aa5.04□□□□□ -1.6
CDC42BPA-201ENST00000334218 CLPSL1A2RUU4 121 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 OVOL1O14753 267 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 RNF152Q8N8N0 203 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 A0A1B0GW54 56 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 TISP43B9A030 160 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 OTOSQ8NHW6 89 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 DPM3Q9P2X0 92 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 A0A1W2PP55 124 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 LMO2P25791 158 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 FGF12P61328 243 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 CLLU1OSQ5K130 101 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 SPACA5Q96QH8 159 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 IGLC7A0M8Q6 106 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 TMEM256-PLSCR3K7ERE1 68 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 CCL11P51671 97 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 KISS1Q15726 138 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 ATRAIDQ6UW56 229 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 TMEM256Q8N2U0 113 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 CRYGNQ8WXF5 182 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 LOC102723996A0A087X1L8 192 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 CLDN14O95500 239 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 GZMHP20718 246 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 C3orf36Q3SXR2 165 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 GCSAMQ8N6F7 178 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 NTN5Q8WTR8 489 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 CD33P20138 364 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 RPL8P62917 257 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 ARHGAP5-AS1Q96IT6 56 aa5.03□□□□□ -1.6
CDC42BPA-201ENST00000334218 SOCS1O15524 211 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms