RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 A0A1B0GUT8 65 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 C2orf83Q53S99 150 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 ODF3L1Q8IXM7 274 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 ZNF418Q8TF45 676 aaPredicted RBP12.42□□□□□ -0.42
VARS2-201ENST00000321897 MRPS16Q9Y3D3 137 aaKnown RBP12.42□□□□□ -0.42
VARS2-201ENST00000321897 F2RL2O00254 374 aa12.41□□□□□ -0.42
VARS2-201ENST00000321897 LINC00312Q9Y6C7 94 aa12.41□□□□□ -0.42
VARS2-201ENST00000321897 V9GYV3 84 aa12.41□□□□□ -0.42
VARS2-201ENST00000321897 CENPEQ02224 2701 aa12.41□□□□□ -0.42
VARS2-201ENST00000321897 TMEM186Q96B77 213 aa12.41□□□□□ -0.42
VARS2-201ENST00000321897 A0A0G2JLM5 398 aa12.41□□□□□ -0.42
VARS2-201ENST00000321897 C9JCJ5 164 aa12.41□□□□□ -0.42
VARS2-201ENST00000321897 AREGP15514 252 aa12.41□□□□□ -0.42
VARS2-201ENST00000321897 PSMB2P49721 201 aa12.41□□□□□ -0.42
VARS2-201ENST00000321897 Q6ZS49 121 aa12.41□□□□□ -0.42
VARS2-201ENST00000321897 OSR1Q8TAX0 266 aaPredicted RBP12.41□□□□□ -0.42
VARS2-201ENST00000321897 PDLIM4P50479 330 aa12.4□□□□□ -0.42
VARS2-201ENST00000321897 PET117Q6UWS5 81 aa12.4□□□□□ -0.42
VARS2-201ENST00000321897 RBPMS2Q6ZRY4 209 aaKnown RBP12.4□□□□□ -0.42
VARS2-201ENST00000321897 PRELID3AQ96N28 172 aa12.4□□□□□ -0.42
VARS2-201ENST00000321897 DSCAML1Q8TD84 2053 aa12.4□□□□□ -0.42
VARS2-201ENST00000321897 SPACA3Q8IXA5 215 aa12.4□□□□□ -0.42
VARS2-201ENST00000321897 C11orf53Q8IXP5 236 aa12.4□□□□□ -0.42
VARS2-201ENST00000321897 CIARTQ8N365 385 aaPredicted RBP12.4□□□□□ -0.42
VARS2-201ENST00000321897 TRBV6-6A0A0A6YYG2 114 aa12.4□□□□□ -0.42
VARS2-201ENST00000321897 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.4□□□□□ -0.42
VARS2-201ENST00000321897 CNTFRP26992 372 aa12.4□□□□□ -0.42
VARS2-201ENST00000321897 LGALS7P47929 136 aa12.4□□□□□ -0.42
VARS2-201ENST00000321897 CD69Q07108 199 aa12.4□□□□□ -0.42
VARS2-201ENST00000321897 ADIPOQQ15848 244 aa12.4□□□□□ -0.42
VARS2-201ENST00000321897 IGFL4Q6B9Z1 124 aa12.4□□□□□ -0.42
VARS2-201ENST00000321897 ASCL5Q7RTU5 278 aa12.4□□□□□ -0.42
VARS2-201ENST00000321897 BOD1L1Q8NFC6 3051 aa12.4□□□□□ -0.43
VARS2-201ENST00000321897 IGHG3P01860 377 aa12.39□□□□□ -0.43
VARS2-201ENST00000321897 PRSS57Q6UWY2 283 aa12.39□□□□□ -0.43
VARS2-201ENST00000321897 LCNL1Q6ZST4 164 aa12.39□□□□□ -0.43
VARS2-201ENST00000321897 EXOC3-AS1Q8N2X6 119 aa12.39□□□□□ -0.43
VARS2-201ENST00000321897 DEFB104AQ8WTQ1 72 aa12.39□□□□□ -0.43
VARS2-201ENST00000321897 GAFA1Q96PS6 74 aa12.39□□□□□ -0.43
VARS2-201ENST00000321897 MSMPQ1L6U9 139 aa12.39□□□□□ -0.43
VARS2-201ENST00000321897 OR4A5Q8NH83 315 aa12.39□□□□□ -0.43
VARS2-201ENST00000321897 TPSG1Q9NRR2 321 aa12.39□□□□□ -0.43
VARS2-201ENST00000321897 ZNF257Q9Y2Q1 563 aa12.39□□□□□ -0.43
VARS2-201ENST00000321897 APOBEC3AP31941 199 aaPredicted RBP12.39□□□□□ -0.43
VARS2-201ENST00000321897 ZNF788Q6ZQV5 615 aa12.39□□□□□ -0.43
VARS2-201ENST00000321897 HIVEP2P31629 2446 aa12.39□□□□□ -0.43
VARS2-201ENST00000321897 NUP210LQ5VU65 1888 aa12.38□□□□□ -0.43
VARS2-201ENST00000321897 SRRM4A7MD48 611 aaKnown RBP12.38□□□□□ -0.43
VARS2-201ENST00000321897 GGTLC3B5MD39 225 aa12.38□□□□□ -0.43
VARS2-201ENST00000321897 NCR2O95944 276 aa12.38□□□□□ -0.43
VARS2-201ENST00000321897 PPIFP30405 207 aaKnown RBP12.38□□□□□ -0.43
VARS2-201ENST00000321897 LINC00173Q6ZV60 143 aa12.38□□□□□ -0.43
VARS2-201ENST00000321897 MRPL52Q86TS9 123 aaKnown RBP12.38□□□□□ -0.43
VARS2-201ENST00000321897 WFDC12Q8WWY7 111 aa12.38□□□□□ -0.43
VARS2-201ENST00000321897 FAM215AQ9Y5M1 114 aa12.38□□□□□ -0.43
VARS2-201ENST00000321897 PRCDQ00LT1 54 aa12.38□□□□□ -0.43
VARS2-201ENST00000321897 KIR3DS1Q14943 382 aa12.38□□□□□ -0.43
VARS2-201ENST00000321897 SRSF7Q16629 238 aaKnown RBP eCLIP12.38□□□□□ -0.43
VARS2-201ENST00000321897 Q9H3A6 140 aa12.38□□□□□ -0.43
VARS2-201ENST00000321897 EPDR1Q9UM22 224 aa12.38□□□□□ -0.43
VARS2-201ENST00000321897 TIMM23O14925 209 aa12.38□□□□□ -0.43
VARS2-201ENST00000321897 EBLN2Q6P2I7 272 aa12.38□□□□□ -0.43
VARS2-201ENST00000321897 TEX45Q8NA69 505 aa12.38□□□□□ -0.43
VARS2-201ENST00000321897 MYOZ3Q8TDC0 251 aa12.38□□□□□ -0.43
VARS2-201ENST00000321897 C5orf30Q96GV9 206 aa12.38□□□□□ -0.43
VARS2-201ENST00000321897 MRPL32Q9BYC8 188 aaKnown RBP12.37□□□□□ -0.43
VARS2-201ENST00000321897 FOXC2Q99958 501 aa12.37□□□□□ -0.43
VARS2-201ENST00000321897 PLA2G2CQ5R387 149 aa12.37□□□□□ -0.43
VARS2-201ENST00000321897 JMJD1CQ15652 2540 aa12.37□□□□□ -0.43
VARS2-201ENST00000321897 F5H697 171 aa12.37□□□□□ -0.43
VARS2-201ENST00000321897 CDKN1BP46527 198 aa12.37□□□□□ -0.43
VARS2-201ENST00000321897 CEP192Q8TEP8 1941 aa12.36□□□□□ -0.43
VARS2-201ENST00000321897 LOC105371242A0A075B767 164 aa12.36□□□□□ -0.43
VARS2-201ENST00000321897 PPP1R27Q86WC6 154 aa12.36□□□□□ -0.43
VARS2-201ENST00000321897 FER1L6-AS1Q8NA97 138 aa12.36□□□□□ -0.43
VARS2-201ENST00000321897 SIGMAR1Q99720 223 aa12.36□□□□□ -0.43
VARS2-201ENST00000321897 IGHV2-26A0A0B4J1V2 119 aa12.36□□□□□ -0.43
VARS2-201ENST00000321897 ABCA12Q86UK0 2595 aa12.36□□□□□ -0.43
VARS2-201ENST00000321897 LOXL3P58215 753 aa12.36□□□□□ -0.43
VARS2-201ENST00000321897 MBD3L4A6NDZ8 208 aaPredicted RBP12.35□□□□□ -0.43
VARS2-201ENST00000321897 MBD3L3A6NE82 208 aaPredicted RBP12.35□□□□□ -0.43
VARS2-201ENST00000321897 MBD3L5A6NJ08 208 aaPredicted RBP12.35□□□□□ -0.43
VARS2-201ENST00000321897 APOMO95445 188 aa12.35□□□□□ -0.43
VARS2-201ENST00000321897 IGKV3-20P01619 116 aa12.35□□□□□ -0.43
VARS2-201ENST00000321897 MGPP08493 103 aa12.35□□□□□ -0.43
VARS2-201ENST00000321897 SAMD5Q5TGI4 173 aa12.35□□□□□ -0.43
VARS2-201ENST00000321897 MBD3L2Q8NHZ7 208 aaPredicted RBP12.35□□□□□ -0.43
VARS2-201ENST00000321897 TMEM133Q9H2Q1 129 aa12.35□□□□□ -0.43
VARS2-201ENST00000321897 RABAC1Q9UI14 185 aa12.35□□□□□ -0.43
VARS2-201ENST00000321897 C15orf65H3BRN8 121 aa12.35□□□□□ -0.43
VARS2-201ENST00000321897 M0R3E3 92 aa12.35□□□□□ -0.43
VARS2-201ENST00000321897 EVI2AP22794 236 aa12.35□□□□□ -0.43
VARS2-201ENST00000321897 CLEC2AQ6UVW9 174 aa12.35□□□□□ -0.43
VARS2-201ENST00000321897 Q6ZS92 163 aa12.35□□□□□ -0.43
VARS2-201ENST00000321897 C19orf24Q9BVV8 132 aa12.35□□□□□ -0.43
VARS2-201ENST00000321897 B9A039 149 aa12.34□□□□□ -0.43
VARS2-201ENST00000321897 GRNP28799 593 aaKnown RBP12.34□□□□□ -0.43
VARS2-201ENST00000321897 SPANXN1Q5VSR9 72 aa12.34□□□□□ -0.43
VARS2-201ENST00000321897 DKK4Q9UBT3 224 aa12.34□□□□□ -0.43
VARS2-201ENST00000321897 MTORP42345 2549 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms