RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 PPIAL4EA0A075B759 164 aa10.7□□□□□ -0.7
SKA3-202ENST00000314759 ZNF785A8K8V0 405 aa10.7□□□□□ -0.7
SKA3-202ENST00000314759 PPIAL4FP0DN26 164 aa10.7□□□□□ -0.7
SKA3-202ENST00000314759 PRB4P10163 310 aaPredicted RBP10.7□□□□□ -0.7
SKA3-202ENST00000314759 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.7□□□□□ -0.7
SKA3-202ENST00000314759 GAGE10A6NGK3 116 aa10.7□□□□□ -0.7
SKA3-202ENST00000314759 CNTFRP26992 372 aa10.7□□□□□ -0.7
SKA3-202ENST00000314759 MC5RP33032 325 aa10.7□□□□□ -0.7
SKA3-202ENST00000314759 LGALS7P47929 136 aa10.7□□□□□ -0.7
SKA3-202ENST00000314759 PLP1P60201 277 aa10.7□□□□□ -0.7
SKA3-202ENST00000314759 ADIPOQQ15848 244 aa10.7□□□□□ -0.7
SKA3-202ENST00000314759 EXOC3-AS1Q8N2X6 119 aa10.7□□□□□ -0.7
SKA3-202ENST00000314759 ZADH2Q8N4Q0 377 aa10.7□□□□□ -0.7
SKA3-202ENST00000314759 CCL17Q92583 94 aa10.7□□□□□ -0.7
SKA3-202ENST00000314759 JMJD8Q96S16 334 aa10.7□□□□□ -0.7
SKA3-202ENST00000314759 TMEM178BH3BS89 294 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 COX8AP10176 69 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 PRNTQ86SH4 94 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 FER1L6-AS1Q8NA97 138 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 NEU4Q8WWR8 484 aaPredicted RBP10.69□□□□□ -0.7
SKA3-202ENST00000314759 MS4A6AQ9H2W1 248 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 OTORQ9NRC9 128 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 MGAQ8IWI9 3026 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 ADGRG4Q8IZF6 3080 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 M0R296 226 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 NDUFB3O43676 98 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 HTR1DP28221 377 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 RPL27AP46776 148 aaKnown RBP10.69□□□□□ -0.7
SKA3-202ENST00000314759 DLX6P56179 175 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 LINC01545Q5VT33 79 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 GOLT1AQ6ZVE7 132 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 CTSZQ9UBR2 303 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 HIGD1AQ9Y241 93 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 DMXL2Q8TDJ6 3036 aa10.69□□□□□ -0.7
SKA3-202ENST00000314759 TNFRSF13BO14836 293 aaPredicted RBP10.68□□□□□ -0.7
SKA3-202ENST00000314759 CEACAM4O75871 244 aa10.68□□□□□ -0.7
SKA3-202ENST00000314759 TMEM97Q5BJF2 176 aa10.68□□□□□ -0.7
SKA3-202ENST00000314759 UFSP1Q6NVU6 142 aa10.68□□□□□ -0.7
SKA3-202ENST00000314759 C16orf54Q6UWD8 224 aa10.68□□□□□ -0.7
SKA3-202ENST00000314759 KALRNO60229 2985 aa10.68□□□□□ -0.7
SKA3-202ENST00000314759 LOXP28300 417 aaPredicted RBP10.68□□□□□ -0.7
SKA3-202ENST00000314759 LYZP61626 148 aa10.68□□□□□ -0.7
SKA3-202ENST00000314759 BPIFA4PQ86YQ2 179 aa10.68□□□□□ -0.7
SKA3-202ENST00000314759 HSPB8Q9UJY1 196 aa10.68□□□□□ -0.7
SKA3-202ENST00000314759 EP300Q09472 2414 aaPredicted RBP10.68□□□□□ -0.7
SKA3-202ENST00000314759 CNOT1A5YKK6 2376 aaKnown RBP10.68□□□□□ -0.7
SKA3-202ENST00000314759 FAM106CPP0CH98 169 aa10.68□□□□□ -0.7
SKA3-202ENST00000314759 FAM106AQ4KMX7 169 aa10.68□□□□□ -0.7
SKA3-202ENST00000314759 TMEM108Q6UXF1 575 aa10.68□□□□□ -0.7
SKA3-202ENST00000314759 ASCL2Q99929 193 aa10.68□□□□□ -0.7
SKA3-202ENST00000314759 SLC25A39Q9BZJ4 359 aaPredicted RBP10.68□□□□□ -0.7
SKA3-202ENST00000314759 ARMS2P0C7Q2 107 aa10.67□□□□□ -0.7
SKA3-202ENST00000314759 HOXB4P17483 251 aaPredicted RBP10.67□□□□□ -0.7
SKA3-202ENST00000314759 HILPDAQ9Y5L2 63 aa10.67□□□□□ -0.7
SKA3-202ENST00000314759 CRYGBP07316 175 aa10.67□□□□□ -0.7
SKA3-202ENST00000314759 IGHV1-8P0DP01 117 aa10.67□□□□□ -0.7
SKA3-202ENST00000314759 DLX1P56177 255 aa10.67□□□□□ -0.7
SKA3-202ENST00000314759 SRSF12Q8WXF0 261 aaKnown RBP10.67□□□□□ -0.7
SKA3-202ENST00000314759 ZNF747Q9BV97 191 aa10.67□□□□□ -0.7
SKA3-202ENST00000314759 SIGLEC9Q9Y336 463 aa10.67□□□□□ -0.7
SKA3-202ENST00000314759 A0A1B0GUT8 65 aa10.66□□□□□ -0.7
SKA3-202ENST00000314759 SPAARA0A1B0GVQ0 90 aa10.66□□□□□ -0.7
SKA3-202ENST00000314759 H3BUT2 72 aa10.66□□□□□ -0.7
SKA3-202ENST00000314759 FGF6P10767 208 aa10.66□□□□□ -0.7
SKA3-202ENST00000314759 TMEM155Q4W5P6 130 aa10.66□□□□□ -0.7
SKA3-202ENST00000314759 PIP4P2Q8N4L2 257 aa10.66□□□□□ -0.7
SKA3-202ENST00000314759 TMEM14CQ9P0S9 112 aa10.66□□□□□ -0.7
SKA3-202ENST00000314759 F11RQ9Y624 299 aaKnown RBP10.66□□□□□ -0.7
SKA3-202ENST00000314759 CACNA1HO95180 2353 aa10.66□□□□□ -0.7
SKA3-202ENST00000314759 MALRD1Q5VYJ5 2156 aa10.66□□□□□ -0.7
SKA3-202ENST00000314759 PRB3Q04118 309 aaPredicted RBP10.66□□□□□ -0.7
SKA3-202ENST00000314759 AP5S1Q9NUS5 200 aa10.66□□□□□ -0.7
SKA3-202ENST00000314759 RABAC1Q9UI14 185 aa10.66□□□□□ -0.7
SKA3-202ENST00000314759 TEX22C9J3V5 150 aa10.65□□□□□ -0.7
SKA3-202ENST00000314759 FTH1P19P0C7X4 201 aa10.65□□□□□ -0.7
SKA3-202ENST00000314759 DEFB124Q8NES8 71 aa10.65□□□□□ -0.7
SKA3-202ENST00000314759 PRSS33Q8NF86 280 aa10.65□□□□□ -0.7
SKA3-202ENST00000314759 C17orf77Q96MU5 243 aa10.65□□□□□ -0.7
SKA3-202ENST00000314759 ZZEF1O43149 2961 aa10.65□□□□□ -0.7
SKA3-202ENST00000314759 G3V4G9 280 aa10.65□□□□□ -0.7
SKA3-202ENST00000314759 LOXL1Q08397 574 aaPredicted RBP10.65□□□□□ -0.7
SKA3-202ENST00000314759 PAX2Q02962 417 aa10.64□□□□□ -0.71
SKA3-202ENST00000314759 BSPH1Q075Z2 132 aa10.64□□□□□ -0.71
SKA3-202ENST00000314759 TMEM133Q9H2Q1 129 aa10.64□□□□□ -0.71
SKA3-202ENST00000314759 C9orf118A6NHY6 69 aa10.64□□□□□ -0.71
SKA3-202ENST00000314759 SEC11AP67812 179 aa10.64□□□□□ -0.71
SKA3-202ENST00000314759 PIP4P1Q86T03 277 aa10.64□□□□□ -0.71
SKA3-202ENST00000314759 RAB37Q96AX2 223 aa10.64□□□□□ -0.71
SKA3-202ENST00000314759 PCNX1Q96RV3 2341 aa10.64□□□□□ -0.71
SKA3-202ENST00000314759 FXYD7P58549 80 aa10.64□□□□□ -0.71
SKA3-202ENST00000314759 IGFL3Q6UXB1 125 aa10.64□□□□□ -0.71
SKA3-202ENST00000314759 PPP1R27Q86WC6 154 aa10.64□□□□□ -0.71
SKA3-202ENST00000314759 OR8A1Q8NGG7 326 aa10.64□□□□□ -0.71
SKA3-202ENST00000314759 TRBV6-1A0A0K0K1D8 114 aa10.63□□□□□ -0.71
SKA3-202ENST00000314759 I3L2K1 104 aa10.63□□□□□ -0.71
SKA3-202ENST00000314759 IGKV1-17P01599 117 aa10.63□□□□□ -0.71
SKA3-202ENST00000314759 RBP4P02753 201 aa10.63□□□□□ -0.71
SKA3-202ENST00000314759 CRIP1P50238 77 aa10.63□□□□□ -0.71
SKA3-202ENST00000314759 RIGQ13278 110 aa10.63□□□□□ -0.71
SKA3-202ENST00000314759 ASCL5Q7RTU5 278 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms