RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 OSTCQ9NRP0 149 aa17.43■□□□□ 0.38
TPM4-201ENST00000300933 TNFRSF19Q9NS68 423 aa17.43■□□□□ 0.38
TPM4-201ENST00000300933 H3BTX0 84 aa17.43■□□□□ 0.38
TPM4-201ENST00000300933 UBE2L3P68036 154 aaKnown RBP17.43■□□□□ 0.38
TPM4-201ENST00000300933 C10orf113Q5VZT2 155 aa17.43■□□□□ 0.38
TPM4-201ENST00000300933 DPM3Q9P2X0 92 aa17.43■□□□□ 0.38
TPM4-201ENST00000300933 HSBP1O75506 76 aa17.42■□□□□ 0.38
TPM4-201ENST00000300933 ZNF331Q9NQX6 463 aaPredicted RBP17.42■□□□□ 0.38
TPM4-201ENST00000300933 PRB4P10163 310 aaPredicted RBP17.42■□□□□ 0.38
TPM4-201ENST00000300933 COTL1Q14019 142 aa17.42■□□□□ 0.38
TPM4-201ENST00000300933 OR4C5Q8NGB2 326 aa17.42■□□□□ 0.38
TPM4-201ENST00000300933 AMMECR1Q9Y4X0 333 aaPredicted RBP17.42■□□□□ 0.38
TPM4-201ENST00000300933 EBLN2Q6P2I7 272 aa17.41■□□□□ 0.38
TPM4-201ENST00000300933 LINC00305Q7Z4B0 112 aa17.41■□□□□ 0.38
TPM4-201ENST00000300933 DTX2Q86UW9 622 aa17.41■□□□□ 0.38
TPM4-201ENST00000300933 M0R2Z0 102 aa17.41■□□□□ 0.38
TPM4-201ENST00000300933 FSTL3O95633 263 aa17.41■□□□□ 0.38
TPM4-201ENST00000300933 IGLV2-8P01709 118 aa17.41■□□□□ 0.38
TPM4-201ENST00000300933 IGLL1P15814 213 aa17.41■□□□□ 0.38
TPM4-201ENST00000300933 TAS2R45P59539 299 aa17.41■□□□□ 0.38
TPM4-201ENST00000300933 VMO1Q7Z5L0 202 aa17.41■□□□□ 0.38
TPM4-201ENST00000300933 TMEM167BQ9NRX6 74 aa17.41■□□□□ 0.38
TPM4-201ENST00000300933 RNF24Q9Y225 148 aa17.41■□□□□ 0.38
TPM4-201ENST00000300933 MRPS16Q9Y3D3 137 aaKnown RBP17.41■□□□□ 0.38
TPM4-201ENST00000300933 ISLRO14498 428 aa17.4■□□□□ 0.38
TPM4-201ENST00000300933 TOMM40O96008 361 aa17.4■□□□□ 0.38
TPM4-201ENST00000300933 SAPCD1Q5SSQ6 148 aa17.4■□□□□ 0.38
TPM4-201ENST00000300933 RNASEKQ6P5S7 137 aaKnown RBP17.4■□□□□ 0.38
TPM4-201ENST00000300933 SGK494Q96LW2 274 aa17.4■□□□□ 0.38
TPM4-201ENST00000300933 SSBP4Q9BWG4 385 aaPredicted RBP17.4■□□□□ 0.38
TPM4-201ENST00000300933 SMIM27A0A1W2PRY6 76 aa17.4■□□□□ 0.38
TPM4-201ENST00000300933 RBP4P02753 201 aa17.4■□□□□ 0.38
TPM4-201ENST00000300933 BLNKQ8WV28 456 aa17.4■□□□□ 0.38
TPM4-201ENST00000300933 FAM181BA6NEQ2 426 aa17.39■□□□□ 0.37
TPM4-201ENST00000300933 KIR3DL3Q8N743 410 aa17.39■□□□□ 0.37
TPM4-201ENST00000300933 VAMP3Q15836 100 aa17.39■□□□□ 0.37
TPM4-201ENST00000300933 TRAV9-2A0A087WT02 112 aa17.38■□□□□ 0.37
TPM4-201ENST00000300933 PMCHL1Q16048 86 aa17.38■□□□□ 0.37
TPM4-201ENST00000300933 OR11H6Q8NGC7 330 aa17.38■□□□□ 0.37
TPM4-201ENST00000300933 CFHR4Q92496 578 aa17.38■□□□□ 0.37
TPM4-201ENST00000300933 IZUMO1RA6ND01 250 aa17.38■□□□□ 0.37
TPM4-201ENST00000300933 M0QZ24 198 aa17.38■□□□□ 0.37
TPM4-201ENST00000300933 PRTN3P24158 256 aa17.38■□□□□ 0.37
TPM4-201ENST00000300933 COX19Q49B96 90 aa17.38■□□□□ 0.37
TPM4-201ENST00000300933 THAP8Q8NA92 274 aa17.38■□□□□ 0.37
TPM4-201ENST00000300933 PAXXQ9BUH6 204 aa17.38■□□□□ 0.37
TPM4-201ENST00000300933 F11RQ9Y624 299 aaKnown RBP17.38■□□□□ 0.37
TPM4-201ENST00000300933 NCBP2LA6PVI3 153 aaKnown RBP17.37■□□□□ 0.37
TPM4-201ENST00000300933 SPATA12Q7Z6I5 190 aa17.37■□□□□ 0.37
TPM4-201ENST00000300933 OR4F17Q8NGA8 305 aa17.37■□□□□ 0.37
TPM4-201ENST00000300933 CLEC5AQ9NY25 188 aa17.37■□□□□ 0.37
TPM4-201ENST00000300933 CDKN1BP46527 198 aa17.37■□□□□ 0.37
TPM4-201ENST00000300933 CAMPP49913 170 aa17.37■□□□□ 0.37
TPM4-201ENST00000300933 GDF5OSQ5U4N7 250 aa17.37■□□□□ 0.37
TPM4-201ENST00000300933 K7EP13 123 aa17.36■□□□□ 0.37
TPM4-201ENST00000300933 CRYGCP07315 174 aa17.36■□□□□ 0.37
TPM4-201ENST00000300933 PRR27Q6MZM9 219 aa17.36■□□□□ 0.37
TPM4-201ENST00000300933 BPESC1Q9GZL8 116 aa17.36■□□□□ 0.37
TPM4-201ENST00000300933 C19orf24Q9BVV8 132 aa17.36■□□□□ 0.37
TPM4-201ENST00000300933 NBR2O15453 112 aa17.35■□□□□ 0.37
TPM4-201ENST00000300933 GNG5P63218 68 aa17.35■□□□□ 0.37
TPM4-201ENST00000300933 IGF2BP2-AS1Q96M15 143 aa17.35■□□□□ 0.37
TPM4-201ENST00000300933 RPH3ALQ9UNE2 315 aa17.35■□□□□ 0.37
TPM4-201ENST00000300933 IGHV2-70DA0A0C4DH43 119 aa17.35■□□□□ 0.37
TPM4-201ENST00000300933 SH2D7A6NKC9 451 aaPredicted RBP17.35■□□□□ 0.37
TPM4-201ENST00000300933 UBE2G1P62253 170 aa17.35■□□□□ 0.37
TPM4-201ENST00000300933 MRPL32Q9BYC8 188 aaKnown RBP17.34■□□□□ 0.37
TPM4-201ENST00000300933 MRPL27Q9P0M9 148 aaKnown RBP17.34■□□□□ 0.37
TPM4-201ENST00000300933 FAM208BQ5VWN6 2430 aa17.34■□□□□ 0.37
TPM4-201ENST00000300933 BPIFB3P59826 476 aa17.34■□□□□ 0.37
TPM4-201ENST00000300933 MPV17L2Q567V2 206 aa17.34■□□□□ 0.37
TPM4-201ENST00000300933 TMEM116Q8NCL8 245 aa17.34■□□□□ 0.37
TPM4-201ENST00000300933 OR1L4Q8NGR5 311 aa17.34■□□□□ 0.37
TPM4-201ENST00000300933 ODF3BA8MYP8 253 aa17.34■□□□□ 0.37
TPM4-201ENST00000300933 M0R1W7 72 aa17.34■□□□□ 0.37
TPM4-201ENST00000300933 LYZP61626 148 aa17.34■□□□□ 0.37
TPM4-201ENST00000300933 FXYD5Q96DB9 178 aa17.34■□□□□ 0.37
TPM4-201ENST00000300933 PSG1P11464 419 aa17.33■□□□□ 0.36
TPM4-201ENST00000300933 NUP35Q8NFH5 326 aa17.33■□□□□ 0.36
TPM4-201ENST00000300933 HOXB4P17483 251 aaPredicted RBP17.33■□□□□ 0.36
TPM4-201ENST00000300933 CEACAM3P40198 252 aa17.33■□□□□ 0.36
TPM4-201ENST00000300933 C2orf70A6NJV1 201 aa17.32■□□□□ 0.36
TPM4-201ENST00000300933 A0A1W2PRE2 83 aa17.32■□□□□ 0.36
TPM4-201ENST00000300933 I3L2K1 104 aa17.32■□□□□ 0.36
TPM4-201ENST00000300933 TOX4O94842 621 aa17.32■□□□□ 0.36
TPM4-201ENST00000300933 POLQO75417 2590 aa17.32■□□□□ 0.36
TPM4-201ENST00000300933 CBY3A6NI87 242 aa17.31■□□□□ 0.36
TPM4-201ENST00000300933 EFNA4P52798 201 aa17.31■□□□□ 0.36
TPM4-201ENST00000300933 NDPQ00604 133 aa17.31■□□□□ 0.36
TPM4-201ENST00000300933 ARL2-SNX15V9GYD0 113 aa17.31■□□□□ 0.36
TPM4-201ENST00000300933 IGHV3-23P01764 117 aa17.31■□□□□ 0.36
TPM4-201ENST00000300933 FAM120AOSQ5T036 256 aa17.31■□□□□ 0.36
TPM4-201ENST00000300933 PVRIGQ6DKI7 326 aa17.31■□□□□ 0.36
TPM4-201ENST00000300933 TRGV9Q99603 122 aa17.31■□□□□ 0.36
TPM4-201ENST00000300933 IGLC1P0CG04 106 aa17.3■□□□□ 0.36
TPM4-201ENST00000300933 DOPEY1Q5JWR5 2465 aa17.3■□□□□ 0.36
TPM4-201ENST00000300933 USP24Q9UPU5 2620 aa17.3■□□□□ 0.36
TPM4-201ENST00000300933 IGHV3OR16-10A0A075B7F0 116 aa17.3■□□□□ 0.36
TPM4-201ENST00000300933 hDV102S1A0JD36 115 aa17.3■□□□□ 0.36
TPM4-201ENST00000300933 CORTO00230 105 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms