RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 FNDC10F2Z333 226 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 G3V4G9 280 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 PYYP10082 97 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 FOLR2P14207 255 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 ZNF726P1Q15940 193 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 IGFL4Q6B9Z1 124 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 GPHB5Q86YW7 130 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 TMEM61Q8N0U2 210 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 Q8N1Y9 231 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 GBGT1Q8N5D6 347 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 FAM24BQ8N5W8 94 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 OR2G3Q8NGZ4 309 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 DYNLRB2Q8TF09 96 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 Q8WTZ3 238 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 TMEM37Q8WXS4 190 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 C17orf77Q96MU5 243 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 PRR25Q96S07 402 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 METTL26Q96S19 204 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 RNF2Q99496 336 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 GINS3Q9BRX5 216 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 ELOVL1Q9BW60 279 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 RHPN1-AS1Q9BWJ2 59 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 WFDC10AQ9H1F0 79 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 ARV1Q9H2C2 271 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 HIGD1AQ9Y241 93 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 X6R8D5 127 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 TRAV30A0A087WSZ9 112 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 TEX46H3BTG2 121 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 SLC17A3O00476 420 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 CHEK1O14757 476 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 TAAR5O14804 337 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 HYPMO75409 117 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 CBLN1P23435 193 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 HLA-DMBP28068 263 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 RPL29P47914 159 aaKnown RBP4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 FGF8P55075 233 aaPredicted RBP4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 ZNF266Q14584 549 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 CD300EQ496F6 205 aaPredicted RBP4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 FAM106AQ4KMX7 169 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 C10orf113Q5VZT2 155 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 ALKAL2Q6UX46 152 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 TCF24Q7RTU0 167 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 ZNF709Q8N972 641 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 GLMPQ8WWB7 406 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 ZNF503Q96F45 646 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 SHANK2-AS3Q9BTD1 123 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 SLC25A2Q9BXI2 301 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 PARD6GQ9BYG4 376 aaPredicted RBP4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 SLC25A39Q9BZJ4 359 aaPredicted RBP4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 SEPSECSQ9HD40 501 aaKnown RBP4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 DAZ1Q9NQZ3 744 aaKnown RBP4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 GAR1Q9NY12 217 aaKnown RBP4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 SMPXQ9UHP9 88 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 RABAC1Q9UI14 185 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 UFC1Q9Y3C8 167 aa4.88□□□□□ -1.63
DEPDC4-201ENST00000299185 NBEAL2Q6ZNJ1 2754 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 ANK2Q01484 3957 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 ZNF98A6NK75 572 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 C17orf112F2Z3M2 114 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 LGALS9O00182 355 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 MRPS12O15235 138 aaKnown RBP4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 SCGB2A1O75556 95 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 OR10J4P0C629 311 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 TPT1P13693 172 aaKnown RBP4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 GP9P14770 177 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 CRYBB3P26998 211 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 KRTAP10-11P60412 298 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 GUCA2BQ16661 112 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 FAM78BQ5VT40 261 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 C16orf54Q6UWD8 224 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 LCN15Q6UWW0 184 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 LINC00305Q7Z4B0 112 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 SLC51BQ86UW2 128 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 STXBP6Q8NFX7 210 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 STOML3Q8TAV4 291 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 FAM213BQ8TBF2 198 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 GATAD1Q8WUU5 269 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 FAM167A-AS1Q96KT0 104 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 ATP6V0BQ99437 205 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 RPRMQ9NS64 109 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 MRPL27Q9P0M9 148 aaKnown RBP4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 UBQLN2Q9UHD9 624 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 TIMM9Q9Y5J7 89 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 SMAD5-AS1Q9Y6J3 95 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 NOTCH3Q9UM47 2321 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 TENM1Q9UKZ4 2725 aa4.87□□□□□ -1.63
DEPDC4-201ENST00000299185 H3BQ15 152 aa4.86□□□□□ -1.63
DEPDC4-201ENST00000299185 MPDU1O75352 247 aa4.86□□□□□ -1.63
DEPDC4-201ENST00000299185 JTBO76095 146 aa4.86□□□□□ -1.63
DEPDC4-201ENST00000299185 FABP1P07148 127 aa4.86□□□□□ -1.63
DEPDC4-201ENST00000299185 C8orf88P0DMB2 117 aa4.86□□□□□ -1.63
DEPDC4-201ENST00000299185 SPP1P10451 314 aa4.86□□□□□ -1.63
DEPDC4-201ENST00000299185 NPPCP23582 126 aa4.86□□□□□ -1.63
DEPDC4-201ENST00000299185 CDC34P49427 236 aaPredicted RBP4.86□□□□□ -1.63
DEPDC4-201ENST00000299185 PLP1P60201 277 aa4.86□□□□□ -1.63
DEPDC4-201ENST00000299185 SELENOTP62341 195 aa4.86□□□□□ -1.63
DEPDC4-201ENST00000299185 IFITM2Q01629 132 aa4.86□□□□□ -1.63
DEPDC4-201ENST00000299185 RAB31Q13636 194 aa4.86□□□□□ -1.63
DEPDC4-201ENST00000299185 DEFB114Q30KQ6 69 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 1064.5 ms