RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 EWSR1Q01844 656 aaKnown RBP eCLIP18.45■□□□□ 0.54
PDF-201ENST00000288022 SAMD13Q5VXD3 122 aa18.45■□□□□ 0.54
PDF-201ENST00000288022 PATE2Q6UY27 113 aa18.45■□□□□ 0.54
PDF-201ENST00000288022 C16orf92Q96LL3 132 aa18.45■□□□□ 0.54
PDF-201ENST00000288022 SOCS3O14543 225 aa18.44■□□□□ 0.54
PDF-201ENST00000288022 RPL7P18124 248 aaKnown RBP18.44■□□□□ 0.54
PDF-201ENST00000288022 ATF4P18848 351 aaPredicted RBP18.44■□□□□ 0.54
PDF-201ENST00000288022 FGF7P21781 194 aa18.44■□□□□ 0.54
PDF-201ENST00000288022 ISLRO14498 428 aa18.43■□□□□ 0.54
PDF-201ENST00000288022 MPC2O95563 127 aa18.43■□□□□ 0.54
PDF-201ENST00000288022 SPP1P10451 314 aa18.43■□□□□ 0.54
PDF-201ENST00000288022 FGL1Q08830 312 aa18.43■□□□□ 0.54
PDF-201ENST00000288022 MIC13Q5XKP0 118 aa18.43■□□□□ 0.54
PDF-201ENST00000288022 MORN3Q6PF18 240 aaPredicted RBP18.43■□□□□ 0.54
PDF-201ENST00000288022 Q6ZRG5 221 aa18.43■□□□□ 0.54
PDF-201ENST00000288022 OR5C1Q8NGR4 320 aa18.43■□□□□ 0.54
PDF-201ENST00000288022 RNF24Q9Y225 148 aa18.43■□□□□ 0.54
PDF-201ENST00000288022 ZFAND6Q6FIF0 208 aa18.42■□□□□ 0.54
PDF-201ENST00000288022 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.42■□□□□ 0.54
PDF-201ENST00000288022 LINC00305Q7Z4B0 112 aa18.42■□□□□ 0.54
PDF-201ENST00000288022 GATAD1Q8WUU5 269 aa18.42■□□□□ 0.54
PDF-201ENST00000288022 CLINT1Q14677 625 aa18.41■□□□□ 0.54
PDF-201ENST00000288022 C10orf113Q5VZT2 155 aa18.41■□□□□ 0.54
PDF-201ENST00000288022 RNF126Q9BV68 326 aa18.41■□□□□ 0.54
PDF-201ENST00000288022 MED28Q9H204 178 aa18.41■□□□□ 0.54
PDF-201ENST00000288022 ELOA3CA0A087WX78 387 aaPredicted RBP18.4■□□□□ 0.54
PDF-201ENST00000288022 DEFB1P60022 68 aa18.4■□□□□ 0.54
PDF-201ENST00000288022 CASC10Q5T4H9 136 aa18.4■□□□□ 0.54
PDF-201ENST00000288022 RARRES2Q99969 163 aa18.4■□□□□ 0.54
PDF-201ENST00000288022 AGRNO00468 2067 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 A0A0J9YWU9 116 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 H3BMM0 161 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 HLA-DRB4P13762 266 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 CXCL3P19876 107 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 C4BPBP20851 252 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 RPL29P47914 159 aaKnown RBP18.39■□□□□ 0.53
PDF-201ENST00000288022 B2MP61769 119 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 PRR20EP86478 221 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 PRR20CP86479 221 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 PRR20DP86480 221 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 PRR20BP86481 221 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 PRR20AP86496 221 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 OPCMLQ14982 345 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 RGS21Q2M5E4 152 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 TMEM41BQ5BJD5 291 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 FOXI2Q6ZQN5 318 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 OR1L4Q8NGR5 311 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 IL17DQ8TAD2 202 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 THAP6Q8TBB0 222 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 TMEM37Q8WXS4 190 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 C17orf77Q96MU5 243 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 DNAJC4Q9NNZ3 241 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 RPRMQ9NS64 109 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 SLC39A9Q9NUM3 307 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 MBD2Q9UBB5 411 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 HLA-DRB4X5D2U9 266 aa18.39■□□□□ 0.53
PDF-201ENST00000288022 MPDU1O75352 247 aa18.38■□□□□ 0.53
PDF-201ENST00000288022 IGKV3-20P01619 116 aa18.38■□□□□ 0.53
PDF-201ENST00000288022 NUTF2P61970 127 aaKnown RBP18.38■□□□□ 0.53
PDF-201ENST00000288022 GDF5OSQ5U4N7 250 aa18.38■□□□□ 0.53
PDF-201ENST00000288022 EBLN2Q6P2I7 272 aa18.38■□□□□ 0.53
PDF-201ENST00000288022 OR11H2Q8NH07 326 aa18.38■□□□□ 0.53
PDF-201ENST00000288022 SAV1Q9H4B6 383 aaPredicted RBP18.38■□□□□ 0.53
PDF-201ENST00000288022 PXMP4Q9Y6I8 212 aa18.38■□□□□ 0.53
PDF-201ENST00000288022 GIG44P09565 113 aaPredicted RBP18.37■□□□□ 0.53
PDF-201ENST00000288022 FCN2Q15485 313 aa18.37■□□□□ 0.53
PDF-201ENST00000288022 LRRC20Q8TCA0 184 aa18.37■□□□□ 0.53
PDF-201ENST00000288022 C20orf173Q96LM9 149 aa18.37■□□□□ 0.53
PDF-201ENST00000288022 PFDN5Q99471 154 aa18.37■□□□□ 0.53
PDF-201ENST00000288022 NPCDR1Q9BY65 106 aa18.37■□□□□ 0.53
PDF-201ENST00000288022 IGFL4Q6B9Z1 124 aa18.36■□□□□ 0.53
PDF-201ENST00000288022 OR4B1Q8NGF8 309 aa18.36■□□□□ 0.53
PDF-201ENST00000288022 CHAC2Q8WUX2 184 aa18.36■□□□□ 0.53
PDF-201ENST00000288022 CLEC5AQ9NY25 188 aa18.36■□□□□ 0.53
PDF-201ENST00000288022 HSPB11Q9Y547 144 aa18.36■□□□□ 0.53
PDF-201ENST00000288022 F6UB75 175 aa18.35■□□□□ 0.53
PDF-201ENST00000288022 RPL12P30050 165 aaKnown RBP18.35■□□□□ 0.53
PDF-201ENST00000288022 MORN5Q5VZ52 161 aa18.35■□□□□ 0.53
PDF-201ENST00000288022 BPIFA4PQ86YQ2 179 aa18.35■□□□□ 0.53
PDF-201ENST00000288022 RNF182Q8N6D2 247 aa18.35■□□□□ 0.53
PDF-201ENST00000288022 OR11H7Q8NGC8 314 aa18.35■□□□□ 0.53
PDF-201ENST00000288022 A0A087X0K7 114 aa18.34■□□□□ 0.53
PDF-201ENST00000288022 SPATA31B1PQ5VZV4 182 aa18.34■□□□□ 0.53
PDF-201ENST00000288022 ZNF709Q8N972 641 aa18.34■□□□□ 0.53
PDF-201ENST00000288022 ATP5SQ99766 215 aa18.34■□□□□ 0.53
PDF-201ENST00000288022 C1QTNF4Q9BXJ3 329 aa18.34■□□□□ 0.53
PDF-201ENST00000288022 TRAV8-2A0A0B4J237 113 aa18.33■□□□□ 0.52
PDF-201ENST00000288022 SNRPCP09234 159 aaKnown RBP18.33■□□□□ 0.52
PDF-201ENST00000288022 SMIM3Q9BZL3 60 aa18.33■□□□□ 0.52
PDF-201ENST00000288022 XCL2Q9UBD3 114 aa18.33■□□□□ 0.52
PDF-201ENST00000288022 A0A0J9YX75 114 aa18.32■□□□□ 0.52
PDF-201ENST00000288022 MRPS12O15235 138 aaKnown RBP18.32■□□□□ 0.52
PDF-201ENST00000288022 FAM78BQ5VT40 261 aa18.32■□□□□ 0.52
PDF-201ENST00000288022 ZNF738Q8NE65 137 aa18.32■□□□□ 0.52
PDF-201ENST00000288022 WDR61Q9GZS3 305 aaKnown RBP18.32■□□□□ 0.52
PDF-201ENST00000288022 TRAV5A0A0B4J249 113 aa18.31■□□□□ 0.52
PDF-201ENST00000288022 FXYD7P58549 80 aa18.31■□□□□ 0.52
PDF-201ENST00000288022 KCNIP2Q9NS61 270 aa18.31■□□□□ 0.52
PDF-201ENST00000288022 C17orf112F2Z3M2 114 aa18.3■□□□□ 0.52
PDF-201ENST00000288022 LCN15Q6UWW0 184 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms