RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 C7orf69Q9H7B7 122 aa13.5□□□□□ -0.25
SH3RF1-201ENST00000284637 IL18BPO95998 194 aa13.5□□□□□ -0.25
SH3RF1-201ENST00000284637 TCRAP04437 139 aa13.5□□□□□ -0.25
SH3RF1-201ENST00000284637 DEFB104AQ8WTQ1 72 aa13.5□□□□□ -0.25
SH3RF1-201ENST00000284637 TRAV8-1A0A0A6YYK1 113 aa13.49□□□□□ -0.25
SH3RF1-201ENST00000284637 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.49□□□□□ -0.25
SH3RF1-201ENST00000284637 GAGE12HA6NDE8 117 aa13.49□□□□□ -0.25
SH3RF1-201ENST00000284637 C15orf62A8K5M9 175 aa13.49□□□□□ -0.25
SH3RF1-201ENST00000284637 ORMDL2Q53FV1 153 aa13.49□□□□□ -0.25
SH3RF1-201ENST00000284637 KLF17Q5JT82 389 aaPredicted RBP13.49□□□□□ -0.25
SH3RF1-201ENST00000284637 IGHV3-64A0A075B6Q5 118 aa13.49□□□□□ -0.25
SH3RF1-201ENST00000284637 TRAV21A0A0B4J279 112 aa13.49□□□□□ -0.25
SH3RF1-201ENST00000284637 CNTFRP26992 372 aa13.49□□□□□ -0.25
SH3RF1-201ENST00000284637 LINC00527Q9UJ94 153 aa13.49□□□□□ -0.25
SH3RF1-201ENST00000284637 SHANK1Q9Y566 2161 aa13.49□□□□□ -0.25
SH3RF1-201ENST00000284637 RPL15P61313 204 aaKnown RBP13.49□□□□□ -0.25
SH3RF1-201ENST00000284637 LYZL1Q6UWQ5 148 aa13.49□□□□□ -0.25
SH3RF1-201ENST00000284637 E9PLN8 166 aa13.49□□□□□ -0.25
SH3RF1-201ENST00000284637 GFRA3O60609 400 aa13.49□□□□□ -0.25
SH3RF1-201ENST00000284637 A0A0U1RRA0 63 aa13.48□□□□□ -0.25
SH3RF1-201ENST00000284637 SLC25A39Q9BZJ4 359 aaPredicted RBP13.48□□□□□ -0.25
SH3RF1-201ENST00000284637 PLSCR4Q9NRQ2 329 aa13.48□□□□□ -0.25
SH3RF1-201ENST00000284637 MLANAQ16655 118 aa13.48□□□□□ -0.25
SH3RF1-201ENST00000284637 Q6P435 159 aa13.48□□□□□ -0.25
SH3RF1-201ENST00000284637 TMEM105Q8N8V8 129 aa13.48□□□□□ -0.25
SH3RF1-201ENST00000284637 HS3ST6Q96QI5 342 aa13.48□□□□□ -0.25
SH3RF1-201ENST00000284637 F2Z2F3 143 aa13.47□□□□□ -0.25
SH3RF1-201ENST00000284637 SRD5A1P18405 259 aa13.47□□□□□ -0.25
SH3RF1-201ENST00000284637 ETDBQ3ZM63 59 aa13.47□□□□□ -0.25
SH3RF1-201ENST00000284637 DOCK9Q9BZ29 2069 aa13.47□□□□□ -0.25
SH3RF1-201ENST00000284637 LINC00479Q96M42 142 aa13.47□□□□□ -0.25
SH3RF1-201ENST00000284637 DOCK7Q96N67 2140 aa13.47□□□□□ -0.25
SH3RF1-201ENST00000284637 RNASE6Q93091 150 aaKnown RBP13.47□□□□□ -0.25
SH3RF1-201ENST00000284637 F8W1H4 67 aa13.47□□□□□ -0.25
SH3RF1-201ENST00000284637 ANAPC10Q9UM13 185 aa13.47□□□□□ -0.25
SH3RF1-201ENST00000284637 BVES-AS1Q5T3Y7 98 aa13.46□□□□□ -0.25
SH3RF1-201ENST00000284637 TMEM200BQ69YZ2 307 aa13.46□□□□□ -0.25
SH3RF1-201ENST00000284637 COLCA1Q6ZS62 124 aa13.46□□□□□ -0.25
SH3RF1-201ENST00000284637 CHAC1Q9BUX1 264 aa13.46□□□□□ -0.25
SH3RF1-201ENST00000284637 TRBV6-6A0A0A6YYG2 114 aa13.46□□□□□ -0.26
SH3RF1-201ENST00000284637 C17orf82Q86X59 251 aaPredicted RBP13.46□□□□□ -0.26
SH3RF1-201ENST00000284637 FAM168AQ92567 244 aa13.46□□□□□ -0.26
SH3RF1-201ENST00000284637 MBNL3Q9NUK0 354 aaKnown RBP13.46□□□□□ -0.26
SH3RF1-201ENST00000284637 TRGV2A0A075B6R0 118 aa13.45□□□□□ -0.26
SH3RF1-201ENST00000284637 NTN3O00634 580 aaPredicted RBP13.45□□□□□ -0.26
SH3RF1-201ENST00000284637 RNF182Q8N6D2 247 aa13.45□□□□□ -0.26
SH3RF1-201ENST00000284637 NUP37Q8NFH4 326 aa13.45□□□□□ -0.26
SH3RF1-201ENST00000284637 IL15RAQ13261 267 aa13.45□□□□□ -0.26
SH3RF1-201ENST00000284637 Q8TAT8 98 aa13.45□□□□□ -0.26
SH3RF1-201ENST00000284637 ERG28Q9UKR5 140 aa13.45□□□□□ -0.26
SH3RF1-201ENST00000284637 IGLC7A0M8Q6 106 aa13.45□□□□□ -0.26
SH3RF1-201ENST00000284637 LAGE3Q14657 143 aa13.45□□□□□ -0.26
SH3RF1-201ENST00000284637 ATRXP46100 2492 aa13.45□□□□□ -0.26
SH3RF1-201ENST00000284637 Q0VFX4 171 aa13.45□□□□□ -0.26
SH3RF1-201ENST00000284637 BRWD3Q6RI45 1802 aa13.44□□□□□ -0.26
SH3RF1-201ENST00000284637 PYGO2Q9BRQ0 406 aa13.44□□□□□ -0.26
SH3RF1-201ENST00000284637 CD28P10747 220 aa13.44□□□□□ -0.26
SH3RF1-201ENST00000284637 IGKV1-6A0A0C4DH72 117 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 PLNP26678 52 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 TMEM155Q4W5P6 130 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 Q6ZVH6 145 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 TMEM167AQ8TBQ9 72 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 PGPEP1Q9NXJ5 209 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 PTPRDP23468 1912 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 IGHV1-8P0DP01 117 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 COX8AP10176 69 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 Q6ZS49 121 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 USF3Q68DE3 2245 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 ZNF726P1Q15940 193 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 C15orf32Q32M92 178 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 ZC2HC1BQ5TFG8 222 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 PF4P02776 101 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 IGFL4Q6B9Z1 124 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 TRGV9Q99603 122 aa13.43□□□□□ -0.26
SH3RF1-201ENST00000284637 A0A1W2PPM0 123 aa13.42□□□□□ -0.26
SH3RF1-201ENST00000284637 PAX8Q06710 450 aa13.42□□□□□ -0.26
SH3RF1-201ENST00000284637 A0A1W2PRX2 142 aa13.42□□□□□ -0.26
SH3RF1-201ENST00000284637 ARTNQ5T4W7 220 aa13.42□□□□□ -0.26
SH3RF1-201ENST00000284637 IGHV1-3A0A0C4DH29 117 aa13.42□□□□□ -0.26
SH3RF1-201ENST00000284637 H0YJW9 148 aa13.42□□□□□ -0.26
SH3RF1-201ENST00000284637 SMKR1H3BMG3 65 aa13.42□□□□□ -0.26
SH3RF1-201ENST00000284637 DEFB125Q8N687 156 aa13.42□□□□□ -0.26
SH3RF1-201ENST00000284637 KLF12Q9Y4X4 402 aa13.42□□□□□ -0.26
SH3RF1-201ENST00000284637 SIGLEC15Q6ZMC9 328 aa13.41□□□□□ -0.26
SH3RF1-201ENST00000284637 IGKV1D-17A0A075B6S4 117 aa13.41□□□□□ -0.26
SH3RF1-201ENST00000284637 ASCL4Q6XD76 172 aa13.41□□□□□ -0.26
SH3RF1-201ENST00000284637 ARFGEF3Q5TH69 2177 aa13.41□□□□□ -0.26
SH3RF1-201ENST00000284637 SH2D1AO60880 128 aa13.41□□□□□ -0.26
SH3RF1-201ENST00000284637 IGKV1-16P04430 117 aa13.41□□□□□ -0.26
SH3RF1-201ENST00000284637 TMEM190Q8WZ59 177 aa13.41□□□□□ -0.26
SH3RF1-201ENST00000284637 NPFFR1Q9GZQ6 430 aa13.41□□□□□ -0.26
SH3RF1-201ENST00000284637 ZNF407Q9C0G0 2248 aa13.41□□□□□ -0.26
SH3RF1-201ENST00000284637 AMN1Q8IY45 258 aa13.41□□□□□ -0.26
SH3RF1-201ENST00000284637 WISP1O95388 367 aa13.4□□□□□ -0.26
SH3RF1-201ENST00000284637 B3GALT5-AS1P59052 145 aa13.4□□□□□ -0.26
SH3RF1-201ENST00000284637 RBMY1BA6NDE4 496 aaKnown RBP13.4□□□□□ -0.26
SH3RF1-201ENST00000284637 TMEM8BA6NDV4 472 aa13.4□□□□□ -0.26
SH3RF1-201ENST00000284637 RBMY1EA6NEQ0 496 aaKnown RBP13.4□□□□□ -0.26
SH3RF1-201ENST00000284637 RBMY1DP0C7P1 496 aaKnown RBP13.4□□□□□ -0.26
SH3RF1-201ENST00000284637 RBMY1A1P0DJD3 496 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms