RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 RNF125Q96EQ8 232 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 DPM2O94777 84 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 IGKV3-20P01619 116 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 MTURNQ8N3F0 131 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 PYGO2Q9BRQ0 406 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 C21orf62Q9NYP8 219 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 TNCP24821 2201 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 LMO1P25800 156 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 ERVK11-1P61568 191 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 RASL11AQ6T310 242 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 SLC25A48Q6ZT89 311 aaKnown RBP9.41□□□□□ -0.9
VPS33A-201ENST00000267199 ITGB1BP1O14713 200 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 CCL25O15444 150 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 SNCGO76070 127 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 IGHG3P01860 377 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 Q6ZR03 302 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 PPP1R27Q86WC6 154 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 FGF23Q9GZV9 251 aaPredicted RBP9.41□□□□□ -0.9
VPS33A-201ENST00000267199 TMEM133Q9H2Q1 129 aa9.41□□□□□ -0.9
VPS33A-201ENST00000267199 NPPCP23582 126 aa9.4□□□□□ -0.9
VPS33A-201ENST00000267199 LYZL1Q6UWQ5 148 aa9.4□□□□□ -0.9
VPS33A-201ENST00000267199 Q8NFD4 153 aa9.4□□□□□ -0.9
VPS33A-201ENST00000267199 OR9G4Q8NGQ1 327 aa9.4□□□□□ -0.9
VPS33A-201ENST00000267199 RNASE8Q8TDE3 154 aaKnown RBP9.4□□□□□ -0.9
VPS33A-201ENST00000267199 ESDP10768 282 aa9.4□□□□□ -0.9
VPS33A-201ENST00000267199 VWC2Q2TAL6 325 aa9.4□□□□□ -0.9
VPS33A-201ENST00000267199 FAM71F2Q6NXP2 309 aa9.4□□□□□ -0.9
VPS33A-201ENST00000267199 SPACA3Q8IXA5 215 aa9.4□□□□□ -0.9
VPS33A-201ENST00000267199 AMN1Q8IY45 258 aa9.4□□□□□ -0.9
VPS33A-201ENST00000267199 ANKHD1Q8IWZ3 2542 aaKnown RBP9.4□□□□□ -0.91
VPS33A-201ENST00000267199 K7EN84 100 aa9.4□□□□□ -0.91
VPS33A-201ENST00000267199 IFI27P40305 119 aaPredicted RBP9.4□□□□□ -0.91
VPS33A-201ENST00000267199 GAGE13Q4V321 117 aa9.4□□□□□ -0.91
VPS33A-201ENST00000267199 LCNL1Q6ZST4 164 aa9.4□□□□□ -0.91
VPS33A-201ENST00000267199 RNASE6Q93091 150 aaKnown RBP9.4□□□□□ -0.91
VPS33A-201ENST00000267199 IGKV2-40A0A087WW87 121 aaPredicted RBP9.39□□□□□ -0.91
VPS33A-201ENST00000267199 IGKV2D-40P01614 121 aaPredicted RBP9.39□□□□□ -0.91
VPS33A-201ENST00000267199 IGKCP01834 107 aa9.39□□□□□ -0.91
VPS33A-201ENST00000267199 ARMS2P0C7Q2 107 aa9.39□□□□□ -0.91
VPS33A-201ENST00000267199 PF4V1P10720 104 aa9.39□□□□□ -0.91
VPS33A-201ENST00000267199 KIR2DL4Q99706 377 aa9.39□□□□□ -0.91
VPS33A-201ENST00000267199 TRAV8-2A0A0B4J237 113 aa9.39□□□□□ -0.91
VPS33A-201ENST00000267199 ZNF474Q6S9Z5 364 aaPredicted RBP9.39□□□□□ -0.91
VPS33A-201ENST00000267199 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.39□□□□□ -0.91
VPS33A-201ENST00000267199 FABP5P3A8MUU1 101 aa9.39□□□□□ -0.91
VPS33A-201ENST00000267199 RNASE2P10153 161 aaKnown RBP9.39□□□□□ -0.91
VPS33A-201ENST00000267199 PSG3Q16557 428 aa9.39□□□□□ -0.91
VPS33A-201ENST00000267199 C8orf46Q8TAG6 207 aa9.39□□□□□ -0.91
VPS33A-201ENST00000267199 Q8TAT8 98 aa9.39□□□□□ -0.91
VPS33A-201ENST00000267199 NDUFS8O00217 210 aa9.39□□□□□ -0.91
VPS33A-201ENST00000267199 KLF17Q5JT82 389 aaPredicted RBP9.39□□□□□ -0.91
VPS33A-201ENST00000267199 ZC2HC1BQ5TFG8 222 aa9.39□□□□□ -0.91
VPS33A-201ENST00000267199 PRSS57Q6UWY2 283 aa9.39□□□□□ -0.91
VPS33A-201ENST00000267199 MED12LQ86YW9 2145 aa9.38□□□□□ -0.91
VPS33A-201ENST00000267199 ZNF329Q86UD4 541 aa9.38□□□□□ -0.91
VPS33A-201ENST00000267199 PAX2Q02962 417 aa9.38□□□□□ -0.91
VPS33A-201ENST00000267199 ZNF56Q15929 161 aa9.38□□□□□ -0.91
VPS33A-201ENST00000267199 TMEM200BQ69YZ2 307 aa9.38□□□□□ -0.91
VPS33A-201ENST00000267199 Q6ZSR3 168 aa9.38□□□□□ -0.91
VPS33A-201ENST00000267199 FAM168AQ92567 244 aa9.38□□□□□ -0.91
VPS33A-201ENST00000267199 IGFL4Q6B9Z1 124 aa9.38□□□□□ -0.91
VPS33A-201ENST00000267199 RPRMLQ8N4K4 120 aa9.38□□□□□ -0.91
VPS33A-201ENST00000267199 MUC6Q6W4X9 2439 aa9.37□□□□□ -0.91
VPS33A-201ENST00000267199 TECTAO75443 2155 aa9.37□□□□□ -0.91
VPS33A-201ENST00000267199 FRMD6-AS1P0C7T7 363 aa9.37□□□□□ -0.91
VPS33A-201ENST00000267199 GAFA1Q96PS6 74 aa9.37□□□□□ -0.91
VPS33A-201ENST00000267199 SLC25A39Q9BZJ4 359 aaPredicted RBP9.37□□□□□ -0.91
VPS33A-201ENST00000267199 CYSLTR1Q9Y271 337 aa9.37□□□□□ -0.91
VPS33A-201ENST00000267199 DYSFO75923 2080 aa9.37□□□□□ -0.91
VPS33A-201ENST00000267199 IGHV2-26A0A0B4J1V2 119 aa9.37□□□□□ -0.91
VPS33A-201ENST00000267199 MBD3L4A6NDZ8 208 aaPredicted RBP9.37□□□□□ -0.91
VPS33A-201ENST00000267199 MBD3L3A6NE82 208 aaPredicted RBP9.37□□□□□ -0.91
VPS33A-201ENST00000267199 MBD3L5A6NJ08 208 aaPredicted RBP9.37□□□□□ -0.91
VPS33A-201ENST00000267199 VDAC2P45880 294 aaPredicted RBP9.37□□□□□ -0.91
VPS33A-201ENST00000267199 MBD3L2Q8NHZ7 208 aaPredicted RBP9.37□□□□□ -0.91
VPS33A-201ENST00000267199 NXT2Q9NPJ8 142 aaKnown RBP9.37□□□□□ -0.91
VPS33A-201ENST00000267199 PLXNB1O43157 2135 aa9.37□□□□□ -0.91
VPS33A-201ENST00000267199 FAM208BQ5VWN6 2430 aa9.37□□□□□ -0.91
VPS33A-201ENST00000267199 CFHR2P36980 270 aa9.37□□□□□ -0.91
VPS33A-201ENST00000267199 UCNP55089 124 aa9.37□□□□□ -0.91
VPS33A-201ENST00000267199 ADIPOQQ15848 244 aa9.37□□□□□ -0.91
VPS33A-201ENST00000267199 CD300EQ496F6 205 aaPredicted RBP9.37□□□□□ -0.91
VPS33A-201ENST00000267199 ADAMTSL5Q6ZMM2 481 aa9.37□□□□□ -0.91
VPS33A-201ENST00000267199 ACACBO00763 2458 aa9.37□□□□□ -0.91
VPS33A-201ENST00000267199 IGHV3OR16-10A0A075B7F0 116 aa9.36□□□□□ -0.91
VPS33A-201ENST00000267199 ZNF815PA8K554 130 aa9.36□□□□□ -0.91
VPS33A-201ENST00000267199 HOXA3O43365 443 aaPredicted RBP9.36□□□□□ -0.91
VPS33A-201ENST00000267199 ANAPC13Q9BS18 74 aa9.36□□□□□ -0.91
VPS33A-201ENST00000267199 IGHV1-24A0A0C4DH33 117 aa9.36□□□□□ -0.91
VPS33A-201ENST00000267199 CKS1BP61024 79 aa9.36□□□□□ -0.91
VPS33A-201ENST00000267199 TMEM167AQ8TBQ9 72 aa9.36□□□□□ -0.91
VPS33A-201ENST00000267199 SMAD7O15105 426 aaKnown RBP9.36□□□□□ -0.91
VPS33A-201ENST00000267199 PDLIM4P50479 330 aa9.36□□□□□ -0.91
VPS33A-201ENST00000267199 GLMPQ8WWB7 406 aa9.36□□□□□ -0.91
VPS33A-201ENST00000267199 H0YJW9 148 aa9.35□□□□□ -0.91
VPS33A-201ENST00000267199 CLEC19AQ6UXS0 136 aa9.35□□□□□ -0.91
VPS33A-201ENST00000267199 EML6Q6ZMW3 1958 aa9.35□□□□□ -0.91
VPS33A-201ENST00000267199 TMEM178BH3BS89 294 aa9.35□□□□□ -0.91
VPS33A-201ENST00000267199 K7EP13 123 aa9.35□□□□□ -0.91
VPS33A-201ENST00000267199 TIMM23O14925 209 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms