RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 J3KRW8 73 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 J3QKU1 62 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 TEX45Q8NA69 505 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 OTORQ9NRC9 128 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 IGHV2-26A0A0B4J1V2 119 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 HBDP02042 147 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 MLANAQ16655 118 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 PRR30Q53SZ7 412 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 SEM1Q6ZVN7 128 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 NEUROG1Q92886 237 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 NHP2Q9NX24 153 aaKnown RBP9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 SH2D7A6NKC9 451 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 IGHV1-46P01743 117 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 TMEM249Q2WGJ8 235 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 OR5AN1Q8NGI8 311 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 YAE1D1Q9NRH1 226 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 ABCA12Q86UK0 2595 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 A0A1B0GWB2 263 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 OR11H12B2RN74 326 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 K7EN84 100 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 CCL25O15444 150 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 VDAC2P45880 294 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 OR11H1Q8NG94 326 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 OR11H2Q8NH07 326 aa9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 NEU4Q8WWR8 484 aaPredicted RBP9.38□□□□□ -0.91
CLSTN3-201ENST00000266546 TGFAP01135 160 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 CFHR2P36980 270 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 RPL13AP40429 203 aaKnown RBP9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 C10orf55Q5SWW7 151 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 OR9G4Q8NGQ1 327 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 TRBV20OR9-2A0A075B6H5 130 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 GGTLC3B5MD39 225 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 FNDC10F2Z333 226 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 MGPP08493 103 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 PSG9Q00887 426 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 MEF2CQ06413 473 aaPredicted RBP9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 MAJINQ3KP22 176 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 Q5PR19 223 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 SLC25A48Q6ZT89 311 aaKnown RBP9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 LHFPL4Q7Z7J7 247 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 IFI27L1Q96BM0 104 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 FOXC2Q99958 501 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 LINC00312Q9Y6C7 94 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 CPAMD8Q8IZJ3 1885 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 IGLV3-9A0A075B6K5 115 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 CCL3L1P16619 93 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 SMAGPQ0VAQ4 97 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 Q8NA96 180 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 KLK15Q9H2R5 256 aa9.37□□□□□ -0.91
CLSTN3-201ENST00000266546 GOSR1O95249 250 aa9.36□□□□□ -0.91
CLSTN3-201ENST00000266546 GATA4P43694 442 aa9.36□□□□□ -0.91
CLSTN3-201ENST00000266546 MFAP4P55083 255 aa9.36□□□□□ -0.91
CLSTN3-201ENST00000266546 TMEM78Q5T7P6 136 aa9.36□□□□□ -0.91
CLSTN3-201ENST00000266546 SIGMAR1Q99720 223 aa9.36□□□□□ -0.91
CLSTN3-201ENST00000266546 ERVK11-1P61568 191 aa9.36□□□□□ -0.91
CLSTN3-201ENST00000266546 SAMD5Q5TGI4 173 aa9.36□□□□□ -0.91
CLSTN3-201ENST00000266546 RNASE8Q8TDE3 154 aaKnown RBP9.36□□□□□ -0.91
CLSTN3-201ENST00000266546 TCRAP04437 139 aa9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 MTURNQ8N3F0 131 aa9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 PIMREGQ9BSJ6 248 aa9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 RPUSD1Q9UJJ7 312 aaKnown RBP9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 PSG8Q9UQ74 426 aa9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 SETD2Q9BYW2 2564 aaPredicted RBP9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 DLX1P56177 255 aa9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 VWC2Q2TAL6 325 aa9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 WDR86Q86TI4 376 aa9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 FER1L6-AS1Q8NA97 138 aa9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 UNC80Q8N2C7 3258 aa9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 SMIM27A0A1W2PRY6 76 aa9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 ATP5LO75964 103 aa9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 CDKN1BP46527 198 aa9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 ODF3L1Q8IXM7 274 aa9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 FBXL15Q9H469 300 aa9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 MALRD1Q5VYJ5 2156 aa9.35□□□□□ -0.91
CLSTN3-201ENST00000266546 FGF23Q9GZV9 251 aaPredicted RBP9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 YLPM1P49750 1951 aaKnown RBP9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 IGHV3OR16-10A0A075B7F0 116 aa9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 TRAV8-1A0A0A6YYK1 113 aa9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 RNASE2P10153 161 aaKnown RBP9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 KIR3DS1Q14943 382 aa9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 ADIPOQQ15848 244 aa9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 ZNF329Q86UD4 541 aa9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 NCOR1P1Q9H4R4 102 aa9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 CGB1A6NKQ9 187 aa9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 MRPL16Q9NX20 251 aaKnown RBP9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 C1RLQ9NZP8 487 aa9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 M0R3E3 92 aa9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 WNT2P09544 360 aa9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 CRIP3Q6Q6R5 217 aa9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 Q8TCH9 128 aa9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 TMEM14BQ9NUH8 114 aa9.34□□□□□ -0.91
CLSTN3-201ENST00000266546 IGKV1D-17A0A075B6S4 117 aa9.33□□□□□ -0.92
CLSTN3-201ENST00000266546 FAM231BA6NCW3 169 aa9.33□□□□□ -0.92
CLSTN3-201ENST00000266546 ESDP10768 282 aa9.33□□□□□ -0.92
CLSTN3-201ENST00000266546 Q6ZR03 302 aa9.33□□□□□ -0.92
CLSTN3-201ENST00000266546 OR1N2Q8NGR9 330 aa9.33□□□□□ -0.92
CLSTN3-201ENST00000266546 S4R3C0 116 aa9.33□□□□□ -0.92
CLSTN3-201ENST00000266546 IGHV3-35A0A0C4DH35 117 aa9.33□□□□□ -0.92
CLSTN3-201ENST00000266546 WISP2O76076 250 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms