RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 BPIFA4PQ86YQ2 179 aa17.34■□□□□ 0.37
UFD1-201ENST00000263202 MRPS12O15235 138 aaKnown RBP17.33■□□□□ 0.37
UFD1-201ENST00000263202 UBE2G2P60604 165 aa17.33■□□□□ 0.37
UFD1-201ENST00000263202 PEA15Q15121 130 aa17.33■□□□□ 0.37
UFD1-201ENST00000263202 C8orf86Q6ZUL3 223 aa17.33■□□□□ 0.37
UFD1-201ENST00000263202 OR11H1Q8NG94 326 aa17.33■□□□□ 0.37
UFD1-201ENST00000263202 VAX2Q9UIW0 290 aa17.33■□□□□ 0.37
UFD1-201ENST00000263202 RNF24Q9Y225 148 aa17.33■□□□□ 0.37
UFD1-201ENST00000263202 A0A1W2PRX2 142 aa17.33■□□□□ 0.36
UFD1-201ENST00000263202 C9JQL5 133 aa17.33■□□□□ 0.36
UFD1-201ENST00000263202 LINC01619G3V211 115 aa17.33■□□□□ 0.36
UFD1-201ENST00000263202 OR1N2Q8NGR9 330 aa17.33■□□□□ 0.36
UFD1-201ENST00000263202 TREM1Q9NP99 234 aa17.33■□□□□ 0.36
UFD1-201ENST00000263202 NIPBLQ6KC79 2804 aaeCLIP17.32■□□□□ 0.365e-6■■■□□ 16.4
UFD1-201ENST00000263202 IGHV3-49A0A0A0MS15 119 aa17.32■□□□□ 0.36
UFD1-201ENST00000263202 K7EMT4 169 aa17.32■□□□□ 0.36
UFD1-201ENST00000263202 ZP3P21754 424 aa17.32■□□□□ 0.36
UFD1-201ENST00000263202 FOXL1Q12952 345 aa17.32■□□□□ 0.36
UFD1-201ENST00000263202 RXFP4Q8TDU9 374 aa17.32■□□□□ 0.36
UFD1-201ENST00000263202 MAST4O15021 2626 aa17.32■□□□□ 0.36
UFD1-201ENST00000263202 TEP1Q99973 2627 aaKnown RBP17.32■□□□□ 0.36
UFD1-201ENST00000263202 SNRPCP09234 159 aaKnown RBP17.31■□□□□ 0.36
UFD1-201ENST00000263202 TAGLN2P37802 199 aaKnown RBP17.31■□□□□ 0.36
UFD1-201ENST00000263202 TM4SF20Q53R12 229 aa17.31■□□□□ 0.36
UFD1-201ENST00000263202 REC114Q7Z4M0 266 aa17.31■□□□□ 0.36
UFD1-201ENST00000263202 DPF1Q92782 380 aa17.31■□□□□ 0.36
UFD1-201ENST00000263202 DUX3Q96PT4 197 aa17.31■□□□□ 0.36
UFD1-201ENST00000263202 DAZ1Q9NQZ3 744 aaKnown RBP17.31■□□□□ 0.36
UFD1-201ENST00000263202 YTHDF2Q9Y5A9 579 aaKnown RBP17.31■□□□□ 0.36
UFD1-201ENST00000263202 IGHV3OR16-13A0A075B7E8 117 aa17.31■□□□□ 0.36
UFD1-201ENST00000263202 IGHV3-74A0A0B4J1X5 117 aa17.31■□□□□ 0.36
UFD1-201ENST00000263202 IGHV3-66A0A0C4DH42 116 aa17.31■□□□□ 0.36
UFD1-201ENST00000263202 LGALS9O00182 355 aa17.31■□□□□ 0.36
UFD1-201ENST00000263202 NBEAP1P0C6P0 100 aa17.31■□□□□ 0.36
UFD1-201ENST00000263202 SLURP1P55000 103 aa17.31■□□□□ 0.36
UFD1-201ENST00000263202 SYNJ2BPP57105 145 aa17.31■□□□□ 0.36
UFD1-201ENST00000263202 KLF5Q13887 457 aaPredicted RBP17.31■□□□□ 0.36
UFD1-201ENST00000263202 OR8I2Q8N0Y5 310 aa17.31■□□□□ 0.36
UFD1-201ENST00000263202 SMDT1Q9H4I9 107 aa17.31■□□□□ 0.36
UFD1-201ENST00000263202 UFC1Q9Y3C8 167 aa17.31■□□□□ 0.36
UFD1-201ENST00000263202 FAM74A7A6NL05 159 aa17.3■□□□□ 0.36
UFD1-201ENST00000263202 H3BQ15 152 aa17.3■□□□□ 0.36
UFD1-201ENST00000263202 IGLC2P0DOY2 106 aa17.3■□□□□ 0.36
UFD1-201ENST00000263202 HIST1H1EP10412 219 aaKnown RBP17.3■□□□□ 0.36
UFD1-201ENST00000263202 RPL7P18124 248 aaKnown RBP17.3■□□□□ 0.36
UFD1-201ENST00000263202 MEF2BQ02080 365 aaPredicted RBP17.3■□□□□ 0.36
UFD1-201ENST00000263202 C1orf194Q5T5A4 169 aa17.3■□□□□ 0.36
UFD1-201ENST00000263202 C1QL4Q86Z23 238 aa17.3■□□□□ 0.36
UFD1-201ENST00000263202 ZNF586Q9NXT0 402 aa17.3■□□□□ 0.36
UFD1-201ENST00000263202 ARL2-SNX15V9GYD0 113 aa17.3■□□□□ 0.36
UFD1-201ENST00000263202 CST9LP1Q5W188 147 aa17.29■□□□□ 0.36
UFD1-201ENST00000263202 OR4F17Q8NGA8 305 aa17.29■□□□□ 0.36
UFD1-201ENST00000263202 RAX2Q96IS3 184 aa17.29■□□□□ 0.36
UFD1-201ENST00000263202 OR4F4Q96R69 305 aa17.29■□□□□ 0.36
UFD1-201ENST00000263202 IGHV7-4-1A0A0J9YVY3 117 aa17.28■□□□□ 0.36
UFD1-201ENST00000263202 ADARB2-AS1A8MUL3 147 aa17.28■□□□□ 0.36
UFD1-201ENST00000263202 A8MWP6 167 aa17.28■□□□□ 0.36
UFD1-201ENST00000263202 ATP5G3P48201 142 aa17.28■□□□□ 0.36
UFD1-201ENST00000263202 CD81P60033 236 aa17.28■□□□□ 0.36
UFD1-201ENST00000263202 C16orf54Q6UWD8 224 aa17.28■□□□□ 0.36
UFD1-201ENST00000263202 BLNKQ8WV28 456 aa17.28■□□□□ 0.36
UFD1-201ENST00000263202 NARS2Q96I59 477 aaKnown RBP17.28■□□□□ 0.36
UFD1-201ENST00000263202 SMAD5-AS1Q9Y6J3 95 aa17.28■□□□□ 0.36
UFD1-201ENST00000263202 GPR82Q96P67 336 aa17.28■□□□□ 0.36
UFD1-201ENST00000263202 A0A1W2PRE2 83 aa17.27■□□□□ 0.36
UFD1-201ENST00000263202 TMEM213A2RRL7 107 aa17.27■□□□□ 0.36
UFD1-201ENST00000263202 C11orf94C9JXX5 98 aa17.27■□□□□ 0.36
UFD1-201ENST00000263202 H3BTX0 84 aa17.27■□□□□ 0.36
UFD1-201ENST00000263202 SRP19P09132 144 aaKnown RBP17.27■□□□□ 0.36
UFD1-201ENST00000263202 EDN2P20800 178 aa17.27■□□□□ 0.36
UFD1-201ENST00000263202 FHL3Q13643 280 aa17.27■□□□□ 0.36
UFD1-201ENST00000263202 SMPXQ9UHP9 88 aa17.27■□□□□ 0.36
UFD1-201ENST00000263202 GLMPQ8WWB7 406 aa17.26■□□□□ 0.35
UFD1-201ENST00000263202 C17orf77Q96MU5 243 aa17.26■□□□□ 0.35
UFD1-201ENST00000263202 SETD2Q9BYW2 2564 aaPredicted RBP17.26■□□□□ 0.35
UFD1-201ENST00000263202 TRBV19A0A075B6N1 114 aa17.26■□□□□ 0.35
UFD1-201ENST00000263202 A0A1W2PS18 150 aa17.26■□□□□ 0.35
UFD1-201ENST00000263202 TMEM218A2RU14 115 aa17.26■□□□□ 0.35
UFD1-201ENST00000263202 CCL24O00175 119 aa17.26■□□□□ 0.35
UFD1-201ENST00000263202 PRIMA1Q86XR5 153 aa17.26■□□□□ 0.35
UFD1-201ENST00000263202 TXNDC17Q9BRA2 123 aa17.26■□□□□ 0.35
UFD1-201ENST00000263202 AWAT1Q58HT5 328 aa17.25■□□□□ 0.35
UFD1-201ENST00000263202 NDUFA11Q86Y39 141 aa17.25■□□□□ 0.35
UFD1-201ENST00000263202 RHPN1-AS1Q9BWJ2 59 aa17.25■□□□□ 0.35
UFD1-201ENST00000263202 SLC35B3Q9H1N7 401 aa17.25■□□□□ 0.35
UFD1-201ENST00000263202 GGTLC3B5MD39 225 aa17.24■□□□□ 0.35
UFD1-201ENST00000263202 CHEK1O14757 476 aa17.24■□□□□ 0.35
UFD1-201ENST00000263202 NDUFB4O95168 129 aa17.24■□□□□ 0.35
UFD1-201ENST00000263202 SFTA3P0C7M3 94 aa17.24■□□□□ 0.35
UFD1-201ENST00000263202 RANP62826 216 aaKnown RBP17.24■□□□□ 0.35
UFD1-201ENST00000263202 KRTAP24-1Q3LI83 254 aa17.24■□□□□ 0.35
UFD1-201ENST00000263202 CCDC28AQ8IWP9 274 aa17.24■□□□□ 0.35
UFD1-201ENST00000263202 DLX4Q92988 240 aaPredicted RBP17.24■□□□□ 0.35
UFD1-201ENST00000263202 GRAMD2BQ96HH9 432 aa17.24■□□□□ 0.35
UFD1-201ENST00000263202 GALR1P47211 349 aa17.24■□□□□ 0.35
UFD1-201ENST00000263202 NSUN5P1Q3KNT7 163 aa17.24■□□□□ 0.35
UFD1-201ENST00000263202 LINC00052Q96N35 136 aa17.24■□□□□ 0.35
UFD1-201ENST00000263202 A0A087X0K7 114 aa17.23■□□□□ 0.35
UFD1-201ENST00000263202 NDUFS6O75380 124 aaKnown RBP17.23■□□□□ 0.35
UFD1-201ENST00000263202 ATF4P18848 351 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms