RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ZNF709Q8N972 641 aa8.75□□□□□ -1.01
TRAF4-202ENST00000262396 OR4D5Q8NGN0 318 aa8.75□□□□□ -1.01
TRAF4-202ENST00000262396 IGF2BP2-AS1Q96M15 143 aa8.75□□□□□ -1.01
TRAF4-202ENST00000262396 PLA2G2EQ9NZK7 142 aa8.75□□□□□ -1.01
TRAF4-202ENST00000262396 MGAT4CQ9UBM8 478 aa8.75□□□□□ -1.01
TRAF4-202ENST00000262396 RNF24Q9Y225 148 aa8.75□□□□□ -1.01
TRAF4-202ENST00000262396 HIGD1AQ9Y241 93 aa8.75□□□□□ -1.01
TRAF4-202ENST00000262396 DNAH10Q8IVF4 4471 aa8.75□□□□□ -1.01
TRAF4-202ENST00000262396 CENPXA8MT69 81 aa8.74□□□□□ -1.01
TRAF4-202ENST00000262396 HYPMO75409 117 aa8.74□□□□□ -1.01
TRAF4-202ENST00000262396 DEFB130BP0DP73 79 aa8.74□□□□□ -1.01
TRAF4-202ENST00000262396 DEFB130AP0DP74 79 aa8.74□□□□□ -1.01
TRAF4-202ENST00000262396 B2MP61769 119 aa8.74□□□□□ -1.01
TRAF4-202ENST00000262396 RRAS2P62070 204 aaPredicted RBP8.74□□□□□ -1.01
TRAF4-202ENST00000262396 HIST1H1AQ02539 215 aaPredicted RBP8.74□□□□□ -1.01
TRAF4-202ENST00000262396 SPINK13Q1W4C9 94 aa8.74□□□□□ -1.01
TRAF4-202ENST00000262396 TMEM88Q6PEY1 159 aa8.74□□□□□ -1.01
TRAF4-202ENST00000262396 CYP2G1PQ6ZSU1 146 aa8.74□□□□□ -1.01
TRAF4-202ENST00000262396 C1orf158Q8N1D5 194 aa8.74□□□□□ -1.01
TRAF4-202ENST00000262396 DEDD2Q8WXF8 326 aa8.74□□□□□ -1.01
TRAF4-202ENST00000262396 C20orf173Q96LM9 149 aa8.74□□□□□ -1.01
TRAF4-202ENST00000262396 SOSTQ9BQB4 213 aa8.74□□□□□ -1.01
TRAF4-202ENST00000262396 IGKV1OR2-108A0A075B7D4 117 aa8.73□□□□□ -1.01
TRAF4-202ENST00000262396 LINC00854A0A1B0GVQ3 168 aa8.73□□□□□ -1.01
TRAF4-202ENST00000262396 ZNF705GA8MUZ8 300 aaPredicted RBP8.73□□□□□ -1.01
TRAF4-202ENST00000262396 M0R2Z0 102 aa8.73□□□□□ -1.01
TRAF4-202ENST00000262396 SSSCA1O60232 199 aa8.73□□□□□ -1.01
TRAF4-202ENST00000262396 CNN1P51911 297 aaKnown RBP8.73□□□□□ -1.01
TRAF4-202ENST00000262396 UBE2MP61081 183 aaKnown RBP8.73□□□□□ -1.01
TRAF4-202ENST00000262396 POLR2GP62487 172 aaKnown RBP eCLIP8.73□□□□□ -1.01
TRAF4-202ENST00000262396 OXA1LQ15070 435 aa8.73□□□□□ -1.01
TRAF4-202ENST00000262396 LGALS9BQ3B8N2 356 aa8.73□□□□□ -1.01
TRAF4-202ENST00000262396 C4orf46Q504U0 113 aa8.73□□□□□ -1.01
TRAF4-202ENST00000262396 IGFL4Q6B9Z1 124 aa8.73□□□□□ -1.01
TRAF4-202ENST00000262396 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.73□□□□□ -1.01
TRAF4-202ENST00000262396 TMEM144Q7Z5S9 345 aa8.73□□□□□ -1.01
TRAF4-202ENST00000262396 C15orf53Q8NAA6 179 aa8.73□□□□□ -1.01
TRAF4-202ENST00000262396 LINC01587Q99440 93 aa8.73□□□□□ -1.01
TRAF4-202ENST00000262396 SLC25A39Q9BZJ4 359 aaPredicted RBP8.73□□□□□ -1.01
TRAF4-202ENST00000262396 NAP1L6A6NFF2 107 aa8.72□□□□□ -1.01
TRAF4-202ENST00000262396 F5H768 121 aa8.72□□□□□ -1.01
TRAF4-202ENST00000262396 ADAP1O75689 374 aa8.72□□□□□ -1.01
TRAF4-202ENST00000262396 LINC00869P0C866 280 aa8.72□□□□□ -1.01
TRAF4-202ENST00000262396 SELENOTP62341 195 aa8.72□□□□□ -1.01
TRAF4-202ENST00000262396 RNF212Q495C1 297 aa8.72□□□□□ -1.01
TRAF4-202ENST00000262396 RNF182Q8N6D2 247 aa8.72□□□□□ -1.01
TRAF4-202ENST00000262396 OR11H7Q8NGC8 314 aa8.72□□□□□ -1.01
TRAF4-202ENST00000262396 OR10P1Q8NGE3 313 aa8.72□□□□□ -1.01
TRAF4-202ENST00000262396 TRIM63Q969Q1 353 aa8.72□□□□□ -1.01
TRAF4-202ENST00000262396 ARL6Q9H0F7 186 aa8.72□□□□□ -1.01
TRAF4-202ENST00000262396 GSKIPQ9P0R6 139 aa8.72□□□□□ -1.01
TRAF4-202ENST00000262396 VPS13DQ5THJ4 4388 aa8.71□□□□□ -1.01
TRAF4-202ENST00000262396 C9orf170A2RU37 121 aa8.71□□□□□ -1.02
TRAF4-202ENST00000262396 LYRM9A8MSI8 78 aa8.71□□□□□ -1.02
TRAF4-202ENST00000262396 BOLA2-SMG1P6H3BVE0 249 aa8.71□□□□□ -1.02
TRAF4-202ENST00000262396 GOSR2O14653 212 aa8.71□□□□□ -1.02
TRAF4-202ENST00000262396 NUDT3O95989 172 aa8.71□□□□□ -1.02
TRAF4-202ENST00000262396 CLINT1Q14677 625 aa8.71□□□□□ -1.02
TRAF4-202ENST00000262396 C1orf134Q5TEV5 83 aa8.71□□□□□ -1.02
TRAF4-202ENST00000262396 BAP18Q8IXM2 172 aa8.71□□□□□ -1.02
TRAF4-202ENST00000262396 SHANK2-AS3Q9BTD1 123 aa8.71□□□□□ -1.02
TRAF4-202ENST00000262396 NPVFQ9HCQ7 196 aa8.71□□□□□ -1.02
TRAF4-202ENST00000262396 V9GYH0 126 aa8.71□□□□□ -1.02
TRAF4-202ENST00000262396 TRAV12-2A0A075B6T6 113 aa8.7□□□□□ -1.02
TRAF4-202ENST00000262396 H3BRN7 92 aa8.7□□□□□ -1.02
TRAF4-202ENST00000262396 L7N2F9 121 aa8.7□□□□□ -1.02
TRAF4-202ENST00000262396 METTL15P1P0C7V9 234 aa8.7□□□□□ -1.02
TRAF4-202ENST00000262396 VAMP2P63027 116 aa8.7□□□□□ -1.02
TRAF4-202ENST00000262396 ZNF846Q147U1 533 aa8.7□□□□□ -1.02
TRAF4-202ENST00000262396 TEPPQ6URK8 271 aa8.7□□□□□ -1.02
TRAF4-202ENST00000262396 TMEM182Q6ZP80 229 aaPredicted RBP8.7□□□□□ -1.02
TRAF4-202ENST00000262396 COX7A2P2O60397 106 aa8.69□□□□□ -1.02
TRAF4-202ENST00000262396 ATP5G1P05496 136 aa8.69□□□□□ -1.02
TRAF4-202ENST00000262396 OR4E1P0C645 316 aa8.69□□□□□ -1.02
TRAF4-202ENST00000262396 MED14OSP0DP75 135 aa8.69□□□□□ -1.02
TRAF4-202ENST00000262396 ATP5G3P48201 142 aa8.69□□□□□ -1.02
TRAF4-202ENST00000262396 BCAP31P51572 246 aa8.69□□□□□ -1.02
TRAF4-202ENST00000262396 DLK1P80370 383 aa8.69□□□□□ -1.02
TRAF4-202ENST00000262396 PSG3Q16557 428 aa8.69□□□□□ -1.02
TRAF4-202ENST00000262396 IAH1Q2TAA2 248 aaPredicted RBP8.69□□□□□ -1.02
TRAF4-202ENST00000262396 CCDC28AQ8IWP9 274 aa8.69□□□□□ -1.02
TRAF4-202ENST00000262396 TMEM256Q8N2U0 113 aa8.69□□□□□ -1.02
TRAF4-202ENST00000262396 OR8A1Q8NGG7 326 aa8.69□□□□□ -1.02
TRAF4-202ENST00000262396 SMIM8Q96KF7 97 aa8.69□□□□□ -1.02
TRAF4-202ENST00000262396 UHRF2Q96PU4 802 aa8.69□□□□□ -1.02
TRAF4-202ENST00000262396 KRTAP17-1Q9BYP8 105 aa8.69□□□□□ -1.02
TRAF4-202ENST00000262396 FAM25EA8MYX2 175 aa8.68□□□□□ -1.02
TRAF4-202ENST00000262396 PRSS46E5RG02 174 aa8.68□□□□□ -1.02
TRAF4-202ENST00000262396 RTL8CO15255 209 aa8.68□□□□□ -1.02
TRAF4-202ENST00000262396 NDUFB6O95139 128 aa8.68□□□□□ -1.02
TRAF4-202ENST00000262396 CCL18P55774 89 aa8.68□□□□□ -1.02
TRAF4-202ENST00000262396 FAM3BP58499 235 aaPredicted RBP8.68□□□□□ -1.02
TRAF4-202ENST00000262396 ID3Q02535 119 aa8.68□□□□□ -1.02
TRAF4-202ENST00000262396 SLC38A11Q08AI6 406 aa8.68□□□□□ -1.02
TRAF4-202ENST00000262396 RAB31Q13636 194 aa8.68□□□□□ -1.02
TRAF4-202ENST00000262396 AMTNQ6UX39 209 aa8.68□□□□□ -1.02
TRAF4-202ENST00000262396 ZNF546Q86UE3 836 aa8.68□□□□□ -1.02
TRAF4-202ENST00000262396 CCDC190Q86UF4 302 aa8.68□□□□□ -1.02
TRAF4-202ENST00000262396 OR10J6PQ8NGY7 276 aa8.68□□□□□ -1.02
TRAF4-202ENST00000262396 RPUSD4Q96CM3 377 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms